RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 LILRA6Q6PI73 481 aa6.8□□□□□ -1.32
SCFD1-211ENST00000554437 TAS1R1Q7RTX1 841 aa6.8□□□□□ -1.32
SCFD1-211ENST00000554437 ANKRD13AQ8IZ07 590 aa6.8□□□□□ -1.32
SCFD1-211ENST00000554437 CXorf38Q8TB03 319 aa6.8□□□□□ -1.32
SCFD1-211ENST00000554437 STAG1Q8WVM7 1258 aa6.8□□□□□ -1.32
SCFD1-211ENST00000554437 RABGGTAQ92696 567 aa6.8□□□□□ -1.32
SCFD1-211ENST00000554437 FATE1Q969F0 183 aa6.8□□□□□ -1.32
SCFD1-211ENST00000554437 RELTQ969Z4 430 aa6.8□□□□□ -1.32
SCFD1-211ENST00000554437 SLC2A13Q96QE2 648 aa6.8□□□□□ -1.32
SCFD1-211ENST00000554437 CEP89Q96ST8 783 aa6.8□□□□□ -1.32
SCFD1-211ENST00000554437 ING3Q9NXR8 418 aa6.8□□□□□ -1.32
SCFD1-211ENST00000554437 ZBTB21Q9ULJ3 1066 aa6.8□□□□□ -1.32
SCFD1-211ENST00000554437 MRFAP1Q9Y605 127 aa6.8□□□□□ -1.32
SCFD1-211ENST00000554437 TNKSO95271 1327 aa6.79□□□□□ -1.32
SCFD1-211ENST00000554437 PMS2P1A4D2B8 440 aa6.79□□□□□ -1.32
SCFD1-211ENST00000554437 GPR42O15529 346 aa6.79□□□□□ -1.32
SCFD1-211ENST00000554437 XPOTO43592 962 aaKnown RBP6.79□□□□□ -1.32
SCFD1-211ENST00000554437 PDGFRBP09619 1106 aa6.79□□□□□ -1.32
SCFD1-211ENST00000554437 LTA4HP09960 611 aaKnown RBP6.79□□□□□ -1.32
SCFD1-211ENST00000554437 RBP3P10745 1247 aa6.79□□□□□ -1.32
SCFD1-211ENST00000554437 AGXTP21549 392 aa6.79□□□□□ -1.32
SCFD1-211ENST00000554437 CCND1P24385 295 aa6.79□□□□□ -1.32
SCFD1-211ENST00000554437 RIN1Q13671 783 aa6.79□□□□□ -1.32
SCFD1-211ENST00000554437 PCBP2Q15366 365 aaKnown RBP eCLIP6.79□□□□□ -1.32
SCFD1-211ENST00000554437 UBE3CQ15386 1083 aa6.79□□□□□ -1.32
SCFD1-211ENST00000554437 BTNL9Q6UXG8 535 aa6.79□□□□□ -1.32
SCFD1-211ENST00000554437 PNMA8AQ86V59 439 aaPredicted RBP6.79□□□□□ -1.32
SCFD1-211ENST00000554437 GLB1L3Q8NCI6 653 aaPredicted RBP6.79□□□□□ -1.32
SCFD1-211ENST00000554437 PAWRQ96IZ0 340 aaKnown RBP6.79□□□□□ -1.32
SCFD1-211ENST00000554437 OR14A2Q96R54 314 aa6.79□□□□□ -1.32
SCFD1-211ENST00000554437 RBM15Q96T37 977 aaKnown RBP eCLIP6.79□□□□□ -1.32
SCFD1-211ENST00000554437 GPHA2Q96T91 129 aa6.79□□□□□ -1.32
SCFD1-211ENST00000554437 PLA2G12BQ9BX93 195 aa6.79□□□□□ -1.32
SCFD1-211ENST00000554437 RCAN3Q9UKA8 241 aa6.79□□□□□ -1.32
SCFD1-211ENST00000554437 A0A1W2PRX2 142 aa6.78□□□□□ -1.32
SCFD1-211ENST00000554437 KLHL33A6NCF5 533 aa6.78□□□□□ -1.32
SCFD1-211ENST00000554437 FOXD2O60548 495 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-211ENST00000554437 RPS19P39019 145 aaKnown RBP6.78□□□□□ -1.32
SCFD1-211ENST00000554437 BUD31P41223 144 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-211ENST00000554437 MEF2AQ02078 507 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-211ENST00000554437 SAFB2Q14151 953 aaKnown RBP eCLIP6.78□□□□□ -1.32
SCFD1-211ENST00000554437 ADRM1Q16186 407 aa6.78□□□□□ -1.32
SCFD1-211ENST00000554437 ANO4Q32M45 955 aa6.78□□□□□ -1.32
SCFD1-211ENST00000554437 MUM1L1Q5H9M0 696 aa6.78□□□□□ -1.32
SCFD1-211ENST00000554437 MBNL2Q5VZF2 373 aaKnown RBP6.78□□□□□ -1.32
SCFD1-211ENST00000554437 TCTN3Q6NUS6 607 aa6.78□□□□□ -1.32
SCFD1-211ENST00000554437 GPR135Q8IZ08 494 aa6.78□□□□□ -1.32
SCFD1-211ENST00000554437 MSL3Q8N5Y2 521 aaKnown RBP6.78□□□□□ -1.32
SCFD1-211ENST00000554437 SSBP3Q9BWW4 388 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-211ENST00000554437 NELFAQ9H3P2 528 aa6.78□□□□□ -1.32
SCFD1-211ENST00000554437 AGO3Q9H9G7 860 aaKnown RBP6.78□□□□□ -1.32
SCFD1-211ENST00000554437 MSL2Q9HCI7 577 aa6.78□□□□□ -1.32
SCFD1-211ENST00000554437 SPEF1Q9Y4P9 236 aa6.78□□□□□ -1.32
SCFD1-211ENST00000554437 B8ZZF3 427 aa6.77□□□□□ -1.33
SCFD1-211ENST00000554437 K7ESM1 405 aa6.77□□□□□ -1.33
SCFD1-211ENST00000554437 MTSS1O43312 755 aa6.77□□□□□ -1.33
SCFD1-211ENST00000554437 PCDHGA12O60330 932 aa6.77□□□□□ -1.33
SCFD1-211ENST00000554437 TMEM127O75204 238 aa6.77□□□□□ -1.33
SCFD1-211ENST00000554437 HMGB1P09429 215 aaKnown RBP6.77□□□□□ -1.33
SCFD1-211ENST00000554437 CTSSP25774 331 aa6.77□□□□□ -1.33
SCFD1-211ENST00000554437 ADAM8P78325 824 aa6.77□□□□□ -1.33
SCFD1-211ENST00000554437 ABHD15Q6UXT9 468 aa6.77□□□□□ -1.33
SCFD1-211ENST00000554437 CMTM4Q8IZR5 234 aa6.77□□□□□ -1.33
SCFD1-211ENST00000554437 PPM1NQ8N819 430 aa6.77□□□□□ -1.33
SCFD1-211ENST00000554437 JADE3Q92613 823 aa6.77□□□□□ -1.33
SCFD1-211ENST00000554437 TMEM176AQ96HP8 235 aa6.77□□□□□ -1.33
SCFD1-211ENST00000554437 LOXL4Q96JB6 756 aa6.77□□□□□ -1.33
SCFD1-211ENST00000554437 IL23AQ9NPF7 189 aa6.77□□□□□ -1.33
SCFD1-211ENST00000554437 TLR9Q9NR96 1032 aa6.77□□□□□ -1.33
SCFD1-211ENST00000554437 ZNF277Q9NRM2 450 aaPredicted RBP6.77□□□□□ -1.33
SCFD1-211ENST00000554437 ZFR2Q9UPR6 939 aaKnown RBP6.77□□□□□ -1.33
SCFD1-211ENST00000554437 PCDHGA9Q9Y5G4 932 aaKnown RBP6.77□□□□□ -1.33
SCFD1-211ENST00000554437 PCDHGA8Q9Y5G5 932 aa6.77□□□□□ -1.33
SCFD1-211ENST00000554437 PCDHGA7Q9Y5G6 932 aa6.77□□□□□ -1.33
SCFD1-211ENST00000554437 PCDHGA6Q9Y5G7 932 aa6.77□□□□□ -1.33
SCFD1-211ENST00000554437 PCDHGA3Q9Y5H0 932 aa6.77□□□□□ -1.33
SCFD1-211ENST00000554437 PCDHGA2Q9Y5H1 932 aa6.77□□□□□ -1.33
SCFD1-211ENST00000554437 RPTORQ8N122 1335 aa6.76□□□□□ -1.33
SCFD1-211ENST00000554437 UBE2QL1A1L167 161 aa6.76□□□□□ -1.33
SCFD1-211ENST00000554437 FZD9O00144 591 aa6.76□□□□□ -1.33
SCFD1-211ENST00000554437 FOXS1O43638 330 aa6.76□□□□□ -1.33
SCFD1-211ENST00000554437 SYN1P17600 705 aa6.76□□□□□ -1.33
SCFD1-211ENST00000554437 NPEPPSP55786 919 aa6.76□□□□□ -1.33
SCFD1-211ENST00000554437 MALLQ13021 153 aa6.76□□□□□ -1.33
SCFD1-211ENST00000554437 GRM7Q14831 915 aa6.76□□□□□ -1.33
SCFD1-211ENST00000554437 FAM180AQ6UWF9 173 aa6.76□□□□□ -1.33
SCFD1-211ENST00000554437 ADGRE4PQ86SQ3 457 aa6.76□□□□□ -1.33
SCFD1-211ENST00000554437 FUKQ8N0W3 1084 aa6.76□□□□□ -1.33
SCFD1-211ENST00000554437 SNX33Q8WV41 574 aa6.76□□□□□ -1.33
SCFD1-211ENST00000554437 SSH1Q8WYL5 1049 aa6.76□□□□□ -1.33
SCFD1-211ENST00000554437 RIN2Q8WYP3 895 aaPredicted RBP6.76□□□□□ -1.33
SCFD1-211ENST00000554437 ADI1Q9BV57 179 aa6.76□□□□□ -1.33
SCFD1-211ENST00000554437 GREM2Q9H772 168 aa6.76□□□□□ -1.33
SCFD1-211ENST00000554437 NRP1O14786 923 aa6.75□□□□□ -1.33
SCFD1-211ENST00000554437 PPM1GO15355 546 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-211ENST00000554437 AKR1B10O60218 316 aa6.75□□□□□ -1.33
SCFD1-211ENST00000554437 ALDH1L1O75891 902 aa6.75□□□□□ -1.33
SCFD1-211ENST00000554437 GSPT1P15170 499 aaKnown RBP6.75□□□□□ -1.33
SCFD1-211ENST00000554437 ADSLP30566 484 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-211ENST00000554437 WNT3AP56704 352 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms