RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 FGF18O76093 207 aa11.57□□□□□ -0.56
PTCD2P1-201ENST00000554393 CD2BP2O95400 341 aaKnown RBP11.57□□□□□ -0.56
PTCD2P1-201ENST00000554393 AXLP30530 894 aa11.57□□□□□ -0.56
PTCD2P1-201ENST00000554393 ARL2P36404 184 aa11.57□□□□□ -0.56
PTCD2P1-201ENST00000554393 TECP42680 631 aa11.57□□□□□ -0.56
PTCD2P1-201ENST00000554393 PTENP60484 403 aa11.57□□□□□ -0.56
PTCD2P1-201ENST00000554393 PLCB3Q01970 1234 aa11.57□□□□□ -0.56
PTCD2P1-201ENST00000554393 HYAL1Q12794 435 aa11.57□□□□□ -0.56
PTCD2P1-201ENST00000554393 TMEM31Q5JXX7 168 aa11.57□□□□□ -0.56
PTCD2P1-201ENST00000554393 GLB1LQ6UWU2 654 aa11.57□□□□□ -0.56
PTCD2P1-201ENST00000554393 LRRC55Q6ZSA7 311 aa11.57□□□□□ -0.56
PTCD2P1-201ENST00000554393 THNSL1Q8IYQ7 743 aa11.57□□□□□ -0.56
PTCD2P1-201ENST00000554393 C4orf32Q8N8J7 132 aa11.57□□□□□ -0.56
PTCD2P1-201ENST00000554393 RNF169Q8NCN4 708 aa11.57□□□□□ -0.56
PTCD2P1-201ENST00000554393 MCPH1Q8NEM0 835 aa11.57□□□□□ -0.56
PTCD2P1-201ENST00000554393 PIGOQ8TEQ8 1089 aa11.57□□□□□ -0.56
PTCD2P1-201ENST00000554393 PGBD4Q96DM1 585 aa11.57□□□□□ -0.56
PTCD2P1-201ENST00000554393 CCDC51Q96ER9 411 aa11.57□□□□□ -0.56
PTCD2P1-201ENST00000554393 ZNF558Q96NG5 402 aa11.57□□□□□ -0.56
PTCD2P1-201ENST00000554393 RAB34Q9BZG1 259 aa11.57□□□□□ -0.56
PTCD2P1-201ENST00000554393 MINDY3Q9H8M7 445 aa11.57□□□□□ -0.56
PTCD2P1-201ENST00000554393 TLR9Q9NR96 1032 aa11.57□□□□□ -0.56
PTCD2P1-201ENST00000554393 WDR70Q9NW82 654 aa11.57□□□□□ -0.56
PTCD2P1-201ENST00000554393 MUC6Q6W4X9 2439 aa11.57□□□□□ -0.56
PTCD2P1-201ENST00000554393 MED24O75448 989 aa11.56□□□□□ -0.56
PTCD2P1-201ENST00000554393 ERLIN2O94905 339 aa11.56□□□□□ -0.56
PTCD2P1-201ENST00000554393 HOXA11P31270 313 aaPredicted RBP11.56□□□□□ -0.56
PTCD2P1-201ENST00000554393 PRPHP41219 470 aa11.56□□□□□ -0.56
PTCD2P1-201ENST00000554393 TOB1P50616 345 aaPredicted RBP11.56□□□□□ -0.56
PTCD2P1-201ENST00000554393 CAPSQ13938 189 aa11.56□□□□□ -0.56
PTCD2P1-201ENST00000554393 PDIA5Q14554 519 aa11.56□□□□□ -0.56
PTCD2P1-201ENST00000554393 RILPL1Q5EBL4 403 aa11.56□□□□□ -0.56
PTCD2P1-201ENST00000554393 KCNT2Q6UVM3 1135 aa11.56□□□□□ -0.56
PTCD2P1-201ENST00000554393 MRPL10Q7Z7H8 261 aaKnown RBP11.56□□□□□ -0.56
PTCD2P1-201ENST00000554393 IGSF22Q8N9C0 903 aa11.56□□□□□ -0.56
PTCD2P1-201ENST00000554393 CNNM3Q8NE01 707 aa11.56□□□□□ -0.56
PTCD2P1-201ENST00000554393 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.56□□□□□ -0.56
PTCD2P1-201ENST00000554393 HELQQ8TDG4 1101 aa11.56□□□□□ -0.56
PTCD2P1-201ENST00000554393 MRPS27Q92552 414 aaKnown RBP11.56□□□□□ -0.56
PTCD2P1-201ENST00000554393 HCSTQ9UBK5 93 aa11.56□□□□□ -0.56
PTCD2P1-201ENST00000554393 DAXXQ9UER7 740 aaPredicted RBP11.56□□□□□ -0.56
PTCD2P1-201ENST00000554393 PUF60Q9UHX1 559 aaKnown RBP11.56□□□□□ -0.56
PTCD2P1-201ENST00000554393 FAM50BQ9Y247 325 aa11.56□□□□□ -0.56
PTCD2P1-201ENST00000554393 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.56□□□□□ -0.56
PTCD2P1-201ENST00000554393 PCDHB2Q9Y5E7 798 aa11.56□□□□□ -0.56
PTCD2P1-201ENST00000554393 CNTNAP2Q9UHC6 1331 aa11.56□□□□□ -0.56
PTCD2P1-201ENST00000554393 GRXCR2A6NFK2 248 aa11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 FSCN2O14926 492 aa11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 TSPAN1O60635 241 aa11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 USO1O60763 962 aaKnown RBP11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 GLRA2P23416 452 aa11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 GJB2P29033 226 aa11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 IRS1P35568 1242 aa11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 LTBRP36941 435 aa11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 KRT17Q04695 432 aa11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 MBTD1Q05BQ5 628 aa11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 NCBP1Q09161 790 aaKnown RBP11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 PTGDRQ13258 359 aa11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 DSG2Q14126 1118 aa11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 NBR1Q14596 966 aa11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 NOMO2Q5JPE7 1267 aa11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 PPP1R15BQ5SWA1 713 aa11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 UBXN11Q5T124 520 aa11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 PTCRAQ6ISU1 281 aaPredicted RBP11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 NOTUMQ6P988 496 aa11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 POTEGQ6S5H5 508 aa11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 SLC39A11Q8N1S5 342 aa11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 EFHBQ8N7U6 833 aa11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 ASAP3Q8TDY4 903 aa11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 CDCA3Q99618 268 aaPredicted RBP11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 POLR3FQ9H1D9 316 aaPredicted RBP11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 UBN1Q9NPG3 1134 aa11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 CLDND1Q9NY35 253 aa11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 SPG21Q9NZD8 308 aa11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 LRWD1Q9UFC0 647 aa11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 SMC3Q9UQE7 1217 aa11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 PCDHB6Q9Y5E3 794 aa11.55□□□□□ -0.56
PTCD2P1-201ENST00000554393 MYH11P35749 1972 aa11.54□□□□□ -0.56
PTCD2P1-201ENST00000554393 ARHGEF35A5YM69 484 aa11.54□□□□□ -0.56
PTCD2P1-201ENST00000554393 H3BQ06 376 aaPredicted RBP11.54□□□□□ -0.56
PTCD2P1-201ENST00000554393 H3BQV1 296 aa11.54□□□□□ -0.56
PTCD2P1-201ENST00000554393 INO80B-WBP1J3KQ70 363 aa11.54□□□□□ -0.56
PTCD2P1-201ENST00000554393 INPPL1O15357 1258 aa11.54□□□□□ -0.56
PTCD2P1-201ENST00000554393 OFD1O75665 1012 aa11.54□□□□□ -0.56
PTCD2P1-201ENST00000554393 CYP11B2P19099 503 aa11.54□□□□□ -0.56
PTCD2P1-201ENST00000554393 NCLP19338 710 aaKnown RBP11.54□□□□□ -0.56
PTCD2P1-201ENST00000554393 ALDH7A1P49419 539 aaKnown RBP11.54□□□□□ -0.56
PTCD2P1-201ENST00000554393 ADAM15Q13444 863 aa11.54□□□□□ -0.56
PTCD2P1-201ENST00000554393 AMHR2Q16671 573 aa11.54□□□□□ -0.56
PTCD2P1-201ENST00000554393 CDCA2Q69YH5 1023 aaPredicted RBP11.54□□□□□ -0.56
PTCD2P1-201ENST00000554393 KCTD17Q8N5Z5 321 aa11.54□□□□□ -0.56
PTCD2P1-201ENST00000554393 PRIMPOLQ96LW4 560 aa11.54□□□□□ -0.56
PTCD2P1-201ENST00000554393 NECAB3Q96P71 396 aaPredicted RBP11.54□□□□□ -0.56
PTCD2P1-201ENST00000554393 NGRNQ9NPE2 291 aaKnown RBP11.54□□□□□ -0.56
PTCD2P1-201ENST00000554393 STK39Q9UEW8 545 aa11.54□□□□□ -0.56
PTCD2P1-201ENST00000554393 ZMYM2Q9UBW7 1377 aa11.54□□□□□ -0.56
PTCD2P1-201ENST00000554393 TBX10O75333 385 aa11.53□□□□□ -0.56
PTCD2P1-201ENST00000554393 CCT6AP40227 531 aaKnown RBP11.53□□□□□ -0.56
PTCD2P1-201ENST00000554393 BCAR1P56945 870 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms