RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 HSDL1Q3SXM5 330 aa8□□□□□ -1.13
ATXN3-224ENST00000554040 CELF3Q5SZQ8 465 aaKnown RBP8□□□□□ -1.13
ATXN3-224ENST00000554040 ADAMTSL4Q6UY14 1074 aa8□□□□□ -1.13
ATXN3-224ENST00000554040 KLHL23Q8NBE8 558 aa8□□□□□ -1.13
ATXN3-224ENST00000554040 OR13H1Q8NG92 308 aa8□□□□□ -1.13
ATXN3-224ENST00000554040 SPATA33Q96N06 139 aa8□□□□□ -1.13
ATXN3-224ENST00000554040 RMDN3Q96TC7 470 aa8□□□□□ -1.13
ATXN3-224ENST00000554040 NAPBQ9H115 298 aa8□□□□□ -1.13
ATXN3-224ENST00000554040 S1PR5Q9H228 398 aa8□□□□□ -1.13
ATXN3-224ENST00000554040 TLE6Q9H808 572 aa8□□□□□ -1.13
ATXN3-224ENST00000554040 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8□□□□□ -1.13
ATXN3-224ENST00000554040 PCDHGC5Q9Y5F6 944 aa8□□□□□ -1.13
ATXN3-224ENST00000554040 MRVI1Q9Y6F6 885 aa8□□□□□ -1.13
ATXN3-224ENST00000554040 GPR179Q6PRD1 2367 aa8□□□□□ -1.13
ATXN3-224ENST00000554040 ATRXP46100 2492 aa8□□□□□ -1.13
ATXN3-224ENST00000554040 F8W735 103 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-224ENST00000554040 H3BRB1 525 aa7.99□□□□□ -1.13
ATXN3-224ENST00000554040 PER2O15055 1255 aa7.99□□□□□ -1.13
ATXN3-224ENST00000554040 ZBTB39O15060 712 aa7.99□□□□□ -1.13
ATXN3-224ENST00000554040 HYAL3O43820 417 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-224ENST00000554040 RANBP6O60518 1105 aaKnown RBP7.99□□□□□ -1.13
ATXN3-224ENST00000554040 HMMRO75330 724 aa7.99□□□□□ -1.13
ATXN3-224ENST00000554040 BRD1O95696 1058 aa7.99□□□□□ -1.13
ATXN3-224ENST00000554040 PDHBP11177 359 aa7.99□□□□□ -1.13
ATXN3-224ENST00000554040 TOP1P11387 765 aaKnown RBP7.99□□□□□ -1.13
ATXN3-224ENST00000554040 GNAT1P11488 350 aa7.99□□□□□ -1.13
ATXN3-224ENST00000554040 CLCN5P51795 746 aa7.99□□□□□ -1.13
ATXN3-224ENST00000554040 MTMR3Q13615 1198 aa7.99□□□□□ -1.13
ATXN3-224ENST00000554040 PUM1Q14671 1186 aaKnown RBP eCLIP7.99□□□□□ -1.13
ATXN3-224ENST00000554040 NAA30Q147X3 362 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-224ENST00000554040 ARHGEF16Q5VV41 709 aa7.99□□□□□ -1.13
ATXN3-224ENST00000554040 Q6ZS46 218 aa7.99□□□□□ -1.13
ATXN3-224ENST00000554040 SIRT2Q8IXJ6 389 aa7.99□□□□□ -1.13
ATXN3-224ENST00000554040 CMTR2Q8IYT2 770 aaKnown RBP7.99□□□□□ -1.13
ATXN3-224ENST00000554040 TMEM130Q8N3G9 435 aa7.99□□□□□ -1.13
ATXN3-224ENST00000554040 IL22RA1Q8N6P7 574 aa7.99□□□□□ -1.13
ATXN3-224ENST00000554040 NEK1Q96PY6 1258 aa7.99□□□□□ -1.13
ATXN3-224ENST00000554040 CDCA3Q99618 268 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-224ENST00000554040 TMEM47Q9BQJ4 181 aa7.99□□□□□ -1.13
ATXN3-224ENST00000554040 TUT1Q9H6E5 874 aaKnown RBP7.99□□□□□ -1.13
ATXN3-224ENST00000554040 COL20A1Q9P218 1284 aa7.99□□□□□ -1.13
ATXN3-224ENST00000554040 SORCS3Q9UPU3 1222 aa7.99□□□□□ -1.13
ATXN3-224ENST00000554040 MRPL42Q9Y6G3 142 aaKnown RBP7.99□□□□□ -1.13
ATXN3-224ENST00000554040 KMT2BQ9UMN6 2715 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-224ENST00000554040 OTOGLQ3ZCN5 2332 aa7.98□□□□□ -1.13
ATXN3-224ENST00000554040 MYO10Q9HD67 2058 aa7.98□□□□□ -1.13
ATXN3-224ENST00000554040 FSD2A1L4K1 749 aa7.98□□□□□ -1.13
ATXN3-224ENST00000554040 SORBS3O60504 671 aa7.98□□□□□ -1.13
ATXN3-224ENST00000554040 GGPS1O95749 300 aa7.98□□□□□ -1.13
ATXN3-224ENST00000554040 GHRHP01286 108 aa7.98□□□□□ -1.13
ATXN3-224ENST00000554040 CHRNA1P02708 482 aa7.98□□□□□ -1.13
ATXN3-224ENST00000554040 TGFB3P10600 412 aa7.98□□□□□ -1.13
ATXN3-224ENST00000554040 ADAM17P78536 824 aa7.98□□□□□ -1.13
ATXN3-224ENST00000554040 RBM10P98175 930 aaKnown RBP7.98□□□□□ -1.13
ATXN3-224ENST00000554040 SP2Q02086 613 aa7.98□□□□□ -1.13
ATXN3-224ENST00000554040 ZNF543Q08ER8 600 aa7.98□□□□□ -1.13
ATXN3-224ENST00000554040 DUSP6Q16828 381 aa7.98□□□□□ -1.13
ATXN3-224ENST00000554040 USH1GQ495M9 461 aa7.98□□□□□ -1.13
ATXN3-224ENST00000554040 KCNV1Q6PIU1 500 aa7.98□□□□□ -1.13
ATXN3-224ENST00000554040 TMEM184AQ6ZMB5 413 aa7.98□□□□□ -1.13
ATXN3-224ENST00000554040 PRR23CQ6ZRP0 262 aa7.98□□□□□ -1.13
ATXN3-224ENST00000554040 MCF2L2Q86YR7 1114 aa7.98□□□□□ -1.13
ATXN3-224ENST00000554040 VN1R2Q8NFZ6 395 aa7.98□□□□□ -1.13
ATXN3-224ENST00000554040 MICAL1Q8TDZ2 1067 aa7.98□□□□□ -1.13
ATXN3-224ENST00000554040 SEMA4AQ9H3S1 761 aa7.98□□□□□ -1.13
ATXN3-224ENST00000554040 AKTIPQ9H8T0 292 aa7.98□□□□□ -1.13
ATXN3-224ENST00000554040 EHMT1Q9H9B1 1298 aa7.98□□□□□ -1.13
ATXN3-224ENST00000554040 SETD4Q9NVD3 440 aa7.98□□□□□ -1.13
ATXN3-224ENST00000554040 NR2E1Q9Y466 385 aa7.98□□□□□ -1.13
ATXN3-224ENST00000554040 TTC3P53804 2025 aa7.97□□□□□ -1.13
ATXN3-224ENST00000554040 ORC4O43929 436 aa7.97□□□□□ -1.13
ATXN3-224ENST00000554040 LMNAP02545 664 aaKnown RBP7.97□□□□□ -1.13
ATXN3-224ENST00000554040 FGRP09769 529 aa7.97□□□□□ -1.13
ATXN3-224ENST00000554040 SNHG28P0DPA3 235 aa7.97□□□□□ -1.13
ATXN3-224ENST00000554040 GHRP10912 638 aa7.97□□□□□ -1.13
ATXN3-224ENST00000554040 SP100P23497 879 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-224ENST00000554040 ATP11AP98196 1134 aa7.97□□□□□ -1.13
ATXN3-224ENST00000554040 UBE3AQ05086 875 aa7.97□□□□□ -1.13
ATXN3-224ENST00000554040 KCNC3Q14003 757 aa7.97□□□□□ -1.13
ATXN3-224ENST00000554040 LPIN1Q14693 890 aa7.97□□□□□ -1.13
ATXN3-224ENST00000554040 ANKRD54Q6NXT1 300 aa7.97□□□□□ -1.13
ATXN3-224ENST00000554040 SYCE2Q6PIF2 218 aa7.97□□□□□ -1.13
ATXN3-224ENST00000554040 KIAA2013Q8IYS2 634 aa7.97□□□□□ -1.13
ATXN3-224ENST00000554040 GALNT11Q8NCW6 608 aa7.97□□□□□ -1.13
ATXN3-224ENST00000554040 KCNG4Q8TDN1 519 aa7.97□□□□□ -1.13
ATXN3-224ENST00000554040 USP26Q9BXU7 913 aa7.97□□□□□ -1.13
ATXN3-224ENST00000554040 MRPL18Q9H0U6 180 aaKnown RBP7.97□□□□□ -1.13
ATXN3-224ENST00000554040 MFSD1Q9H3U5 465 aa7.97□□□□□ -1.13
ATXN3-224ENST00000554040 MLXIPQ9HAP2 919 aa7.97□□□□□ -1.13
ATXN3-224ENST00000554040 PXMP2Q9NR77 195 aa7.97□□□□□ -1.13
ATXN3-224ENST00000554040 ECHDC1Q9NTX5 307 aa7.97□□□□□ -1.13
ATXN3-224ENST00000554040 TCP11L1Q9NUJ3 509 aa7.97□□□□□ -1.13
ATXN3-224ENST00000554040 DLL3Q9NYJ7 618 aa7.97□□□□□ -1.13
ATXN3-224ENST00000554040 CHD6Q8TD26 2715 aa7.97□□□□□ -1.13
ATXN3-224ENST00000554040 ABCB11O95342 1321 aa7.97□□□□□ -1.13
ATXN3-224ENST00000554040 BAHCC1Q9P281 2608 aa7.97□□□□□ -1.13
ATXN3-224ENST00000554040 LGALS2P05162 132 aa7.96□□□□□ -1.14
ATXN3-224ENST00000554040 SRGAP2BP0DMP2 458 aa7.96□□□□□ -1.14
ATXN3-224ENST00000554040 HSPD1P10809 573 aaKnown RBP7.96□□□□□ -1.14
ATXN3-224ENST00000554040 HOXB8P17481 243 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms