RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 SKIP12755 728 aa15.24■□□□□ 0.03
TUBB3-202ENST00000553656 SARSP49591 514 aaKnown RBP15.24■□□□□ 0.03
TUBB3-202ENST00000553656 UBE2HP62256 183 aa15.24■□□□□ 0.03
TUBB3-202ENST00000553656 DSC3Q14574 896 aa15.24■□□□□ 0.03
TUBB3-202ENST00000553656 FAM187BQ17R55 369 aa15.24■□□□□ 0.03
TUBB3-202ENST00000553656 HERC4Q5GLZ8 1057 aaPredicted RBP15.24■□□□□ 0.03
TUBB3-202ENST00000553656 KRBA2Q6ZNG9 492 aa15.24■□□□□ 0.03
TUBB3-202ENST00000553656 CLEC17AQ6ZS10 378 aa15.24■□□□□ 0.03
TUBB3-202ENST00000553656 APBB1IPQ7Z5R6 666 aaPredicted RBP15.24■□□□□ 0.03
TUBB3-202ENST00000553656 SFR1Q86XK3 245 aa15.24■□□□□ 0.03
TUBB3-202ENST00000553656 NPAS4Q8IUM7 802 aa15.24■□□□□ 0.03
TUBB3-202ENST00000553656 HERC6Q8IVU3 1022 aa15.24■□□□□ 0.03
TUBB3-202ENST00000553656 LINC01599Q8WXQ3 324 aa15.24■□□□□ 0.03
TUBB3-202ENST00000553656 CCDC47Q96A33 483 aaKnown RBP15.24■□□□□ 0.03
TUBB3-202ENST00000553656 DNAJC19Q96DA6 116 aa15.24■□□□□ 0.03
TUBB3-202ENST00000553656 PAGE5Q96GU1 130 aa15.24■□□□□ 0.03
TUBB3-202ENST00000553656 C7orf25Q9BPX7 421 aa15.24■□□□□ 0.03
TUBB3-202ENST00000553656 MRPL4Q9BYD3 311 aaKnown RBP15.24■□□□□ 0.03
TUBB3-202ENST00000553656 TRIM6Q9C030 488 aaPredicted RBP15.24■□□□□ 0.03
TUBB3-202ENST00000553656 CCDC113Q9H0I3 377 aa15.24■□□□□ 0.03
TUBB3-202ENST00000553656 BLZF1Q9H2G9 400 aa15.24■□□□□ 0.03
TUBB3-202ENST00000553656 FZD8Q9H461 694 aa15.24■□□□□ 0.03
TUBB3-202ENST00000553656 MRPL44Q9H9J2 332 aaKnown RBP15.24■□□□□ 0.03
TUBB3-202ENST00000553656 HOOK1Q9UJC3 728 aaKnown RBP15.24■□□□□ 0.03
TUBB3-202ENST00000553656 PCDHB7Q9Y5E2 793 aa15.24■□□□□ 0.03
TUBB3-202ENST00000553656 RBAK-RBAKDNI3L0D1 243 aa15.23■□□□□ 0.03
TUBB3-202ENST00000553656 N4BP3O15049 544 aa15.23■□□□□ 0.03
TUBB3-202ENST00000553656 B4GALT5O43286 388 aa15.23■□□□□ 0.03
TUBB3-202ENST00000553656 KINO60870 393 aaKnown RBP15.23■□□□□ 0.03
TUBB3-202ENST00000553656 MAPTP10636 758 aaKnown RBP15.23■□□□□ 0.03
TUBB3-202ENST00000553656 RAB27AP51159 221 aa15.23■□□□□ 0.03
TUBB3-202ENST00000553656 NCKAP1LP55160 1127 aa15.23■□□□□ 0.03
TUBB3-202ENST00000553656 LRIT3Q3SXY7 679 aa15.23■□□□□ 0.03
TUBB3-202ENST00000553656 FAM117BQ6P1L5 589 aa15.23■□□□□ 0.03
TUBB3-202ENST00000553656 CNNM4Q6P4Q7 775 aa15.23■□□□□ 0.03
TUBB3-202ENST00000553656 STXBP4Q6ZWJ1 553 aa15.23■□□□□ 0.03
TUBB3-202ENST00000553656 HAUS6Q7Z4H7 955 aa15.23■□□□□ 0.03
TUBB3-202ENST00000553656 RTN4RL1Q86UN2 441 aaPredicted RBP15.23■□□□□ 0.03
TUBB3-202ENST00000553656 HACE1Q8IYU2 909 aa15.23■□□□□ 0.03
TUBB3-202ENST00000553656 FMR1NBQ8N0W7 255 aaPredicted RBP15.23■□□□□ 0.03
TUBB3-202ENST00000553656 TMEM161BQ8NDZ6 487 aa15.23■□□□□ 0.03
TUBB3-202ENST00000553656 BICD1Q96G01 975 aa15.23■□□□□ 0.03
TUBB3-202ENST00000553656 CPB2Q96IY4 423 aa15.23■□□□□ 0.03
TUBB3-202ENST00000553656 ADPGKQ9BRR6 497 aa15.23■□□□□ 0.03
TUBB3-202ENST00000553656 MSRAQ9UJ68 235 aa15.23■□□□□ 0.03
TUBB3-202ENST00000553656 C9IYK1 514 aa15.22■□□□□ 0.03
TUBB3-202ENST00000553656 GTPBP6O43824 516 aaPredicted RBP15.22■□□□□ 0.03
TUBB3-202ENST00000553656 TLL1O43897 1013 aa15.22■□□□□ 0.03
TUBB3-202ENST00000553656 GADD45BO75293 160 aaPredicted RBP15.22■□□□□ 0.03
TUBB3-202ENST00000553656 GJB5O95377 273 aa15.22■□□□□ 0.03
TUBB3-202ENST00000553656 ARF4P18085 180 aaPredicted RBP15.22■□□□□ 0.03
TUBB3-202ENST00000553656 SMAD3P84022 425 aaKnown RBP15.22■□□□□ 0.03
TUBB3-202ENST00000553656 COASYQ13057 564 aa15.22■□□□□ 0.03
TUBB3-202ENST00000553656 CUL4BQ13620 913 aa15.22■□□□□ 0.03
TUBB3-202ENST00000553656 RAB30Q15771 203 aa15.22■□□□□ 0.03
TUBB3-202ENST00000553656 AMHR2Q16671 573 aa15.22■□□□□ 0.03
TUBB3-202ENST00000553656 UNC13DQ70J99 1090 aa15.22■□□□□ 0.03
TUBB3-202ENST00000553656 GRAMD1CQ8IYS0 662 aa15.22■□□□□ 0.03
TUBB3-202ENST00000553656 RNF169Q8NCN4 708 aa15.22■□□□□ 0.03
TUBB3-202ENST00000553656 TOP1MTQ969P6 601 aa15.22■□□□□ 0.03
TUBB3-202ENST00000553656 YME1L1Q96TA2 773 aa15.22■□□□□ 0.03
TUBB3-202ENST00000553656 OLFML3Q9NRN5 406 aa15.22■□□□□ 0.03
TUBB3-202ENST00000553656 FAM105AQ9NUU6 356 aa15.22■□□□□ 0.03
TUBB3-202ENST00000553656 TBC1D7Q9P0N9 293 aa15.22■□□□□ 0.03
TUBB3-202ENST00000553656 A0A0U1RQF3 1178 aa15.21■□□□□ 0.03
TUBB3-202ENST00000553656 PVALEFA0A1B0GWK0 134 aa15.21■□□□□ 0.03
TUBB3-202ENST00000553656 FRMD3A2A2Y4 597 aa15.21■□□□□ 0.03
TUBB3-202ENST00000553656 GRXCR1A8MXD5 290 aa15.21■□□□□ 0.03
TUBB3-202ENST00000553656 HOXA2O43364 376 aa15.21■□□□□ 0.03
TUBB3-202ENST00000553656 GCNT3O95395 438 aa15.21■□□□□ 0.03
TUBB3-202ENST00000553656 NMT1P30419 496 aaKnown RBP15.21■□□□□ 0.03
TUBB3-202ENST00000553656 HOXA11P31270 313 aaPredicted RBP15.21■□□□□ 0.03
TUBB3-202ENST00000553656 ALCAMQ13740 583 aa15.21■□□□□ 0.03
TUBB3-202ENST00000553656 HABP4Q5JVS0 413 aaKnown RBP15.21■□□□□ 0.03
TUBB3-202ENST00000553656 ATF7IP2Q5U623 682 aa15.21■□□□□ 0.03
TUBB3-202ENST00000553656 SLC27A1Q6PCB7 646 aa15.21■□□□□ 0.03
TUBB3-202ENST00000553656 TMCO2Q7Z6W1 182 aaPredicted RBP15.21■□□□□ 0.03
TUBB3-202ENST00000553656 ECHDC2Q86YB7 292 aa15.21■□□□□ 0.03
TUBB3-202ENST00000553656 ABI1Q8IZP0 508 aa15.21■□□□□ 0.03
TUBB3-202ENST00000553656 HVCN1Q96D96 273 aa15.21■□□□□ 0.03
TUBB3-202ENST00000553656 PGBD4Q96DM1 585 aa15.21■□□□□ 0.03
TUBB3-202ENST00000553656 TRAIPQ9BWF2 469 aa15.21■□□□□ 0.03
TUBB3-202ENST00000553656 ELAC1Q9H777 363 aaKnown RBP15.21■□□□□ 0.03
TUBB3-202ENST00000553656 EXOC1Q9NV70 894 aa15.21■□□□□ 0.03
TUBB3-202ENST00000553656 TMEM161AQ9NX61 479 aa15.21■□□□□ 0.03
TUBB3-202ENST00000553656 TBX20Q9UMR3 447 aa15.21■□□□□ 0.03
TUBB3-202ENST00000553656 INSL6Q9Y581 213 aa15.21■□□□□ 0.03
TUBB3-202ENST00000553656 PCDHB2Q9Y5E7 798 aa15.21■□□□□ 0.03
TUBB3-202ENST00000553656 PCDHA11Q9Y5I1 949 aa15.21■□□□□ 0.03
TUBB3-202ENST00000553656 A0A1B0GUA9 196 aa15.2■□□□□ 0.02
TUBB3-202ENST00000553656 NR1I2O75469 434 aa15.2■□□□□ 0.02
TUBB3-202ENST00000553656 EOMESO95936 686 aa15.2■□□□□ 0.02
TUBB3-202ENST00000553656 CASP1P29466 404 aa15.2■□□□□ 0.02
TUBB3-202ENST00000553656 LIG4P49917 911 aa15.2■□□□□ 0.02
TUBB3-202ENST00000553656 RABGGTBP53611 331 aa15.2■□□□□ 0.02
TUBB3-202ENST00000553656 POSTNQ15063 836 aa15.2■□□□□ 0.02
TUBB3-202ENST00000553656 DCAF4L1Q3SXM0 396 aa15.2■□□□□ 0.02
TUBB3-202ENST00000553656 FAM26FQ5R3K3 315 aa15.2■□□□□ 0.02
TUBB3-202ENST00000553656 FAM109BQ6ICB4 259 aaPredicted RBP15.2■□□□□ 0.02
TUBB3-202ENST00000553656 ENGASEQ8NFI3 743 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms