RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 SUSD6Q92537 303 aa14.2□□□□□ -0.14
LINC00643-202ENST00000553426 IGSF21Q96ID5 467 aa14.2□□□□□ -0.14
LINC00643-202ENST00000553426 MFSD14AQ96MC6 490 aa14.2□□□□□ -0.14
LINC00643-202ENST00000553426 RSAD1Q9HA92 442 aa14.2□□□□□ -0.14
LINC00643-202ENST00000553426 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.19□□□□□ -0.14
LINC00643-202ENST00000553426 INO80B-WBP1J3KQ70 363 aa14.19□□□□□ -0.14
LINC00643-202ENST00000553426 ZBTB39O15060 712 aa14.19□□□□□ -0.14
LINC00643-202ENST00000553426 JAK2O60674 1132 aa14.19□□□□□ -0.14
LINC00643-202ENST00000553426 ALDH2P05091 517 aa14.19□□□□□ -0.14
LINC00643-202ENST00000553426 GALTP07902 379 aa14.19□□□□□ -0.14
LINC00643-202ENST00000553426 ATP2B1P20020 1258 aa14.19□□□□□ -0.14
LINC00643-202ENST00000553426 AXLP30530 894 aa14.19□□□□□ -0.14
LINC00643-202ENST00000553426 ITIH3Q06033 890 aa14.19□□□□□ -0.14
LINC00643-202ENST00000553426 KCNC3Q14003 757 aa14.19□□□□□ -0.14
LINC00643-202ENST00000553426 NOTUMQ6P988 496 aa14.19□□□□□ -0.14
LINC00643-202ENST00000553426 MRPL10Q7Z7H8 261 aaKnown RBP14.19□□□□□ -0.14
LINC00643-202ENST00000553426 HACE1Q8IYU2 909 aa14.19□□□□□ -0.14
LINC00643-202ENST00000553426 EDAQ92838 391 aa14.19□□□□□ -0.14
LINC00643-202ENST00000553426 CCDC51Q96ER9 411 aa14.19□□□□□ -0.14
LINC00643-202ENST00000553426 NECTIN4Q96NY8 510 aa14.19□□□□□ -0.14
LINC00643-202ENST00000553426 HSD17B14Q9BPX1 270 aa14.19□□□□□ -0.14
LINC00643-202ENST00000553426 NRDE2Q9H7Z3 1164 aa14.19□□□□□ -0.14
LINC00643-202ENST00000553426 MINDY3Q9H8M7 445 aa14.19□□□□□ -0.14
LINC00643-202ENST00000553426 LIMCH1Q9UPQ0 1083 aa14.19□□□□□ -0.14
LINC00643-202ENST00000553426 NR2E1Q9Y466 385 aa14.19□□□□□ -0.14
LINC00643-202ENST00000553426 MEIS3P2A8K0S8 358 aa14.18□□□□□ -0.14
LINC00643-202ENST00000553426 XRCC6P12956 609 aaKnown RBP eCLIP14.18□□□□□ -0.14
LINC00643-202ENST00000553426 ITGA4P13612 1032 aa14.18□□□□□ -0.14
LINC00643-202ENST00000553426 HOXA11P31270 313 aaPredicted RBP14.18□□□□□ -0.14
LINC00643-202ENST00000553426 MCM7P33993 719 aa14.18□□□□□ -0.14
LINC00643-202ENST00000553426 MRE11P49959 708 aa14.18□□□□□ -0.14
LINC00643-202ENST00000553426 PTENP60484 403 aa14.18□□□□□ -0.14
LINC00643-202ENST00000553426 POU5F1BQ06416 359 aa14.18□□□□□ -0.14
LINC00643-202ENST00000553426 GNL2Q13823 731 aaKnown RBP14.18□□□□□ -0.14
LINC00643-202ENST00000553426 AGMOQ6ZNB7 445 aa14.18□□□□□ -0.14
LINC00643-202ENST00000553426 PPFIBP1Q86W92 1011 aa14.18□□□□□ -0.14
LINC00643-202ENST00000553426 ERMNQ8TAM6 284 aa14.18□□□□□ -0.14
LINC00643-202ENST00000553426 C8orf76Q96K31 380 aa14.18□□□□□ -0.14
LINC00643-202ENST00000553426 LLPHQ9BRT6 129 aaKnown RBP14.18□□□□□ -0.14
LINC00643-202ENST00000553426 TMEM175Q9BSA9 504 aa14.18□□□□□ -0.14
LINC00643-202ENST00000553426 APOL5Q9BWW9 433 aa14.18□□□□□ -0.14
LINC00643-202ENST00000553426 TRIM6Q9C030 488 aaPredicted RBP14.18□□□□□ -0.14
LINC00643-202ENST00000553426 ZBP1Q9H171 429 aa14.18□□□□□ -0.14
LINC00643-202ENST00000553426 S1PR5Q9H228 398 aa14.18□□□□□ -0.14
LINC00643-202ENST00000553426 DZANK1Q9NVP4 752 aa14.18□□□□□ -0.14
LINC00643-202ENST00000553426 HCFC2Q9Y5Z7 792 aa14.18□□□□□ -0.14
LINC00643-202ENST00000553426 IRAK3Q9Y616 596 aa14.18□□□□□ -0.14
LINC00643-202ENST00000553426 SPDYE4A6NLX3 237 aa14.17□□□□□ -0.14
LINC00643-202ENST00000553426 CLASP2O75122 1294 aaKnown RBP14.17□□□□□ -0.14
LINC00643-202ENST00000553426 NR1I2O75469 434 aa14.17□□□□□ -0.14
LINC00643-202ENST00000553426 CENPBP07199 599 aaPredicted RBP14.17□□□□□ -0.14
LINC00643-202ENST00000553426 CTSAP10619 480 aa14.17□□□□□ -0.14
LINC00643-202ENST00000553426 NCLP19338 710 aaKnown RBP14.17□□□□□ -0.14
LINC00643-202ENST00000553426 HMGN5P82970 282 aaKnown RBP14.17□□□□□ -0.14
LINC00643-202ENST00000553426 SYCE2Q6PIF2 218 aa14.17□□□□□ -0.14
LINC00643-202ENST00000553426 ZBTB33Q86T24 672 aa14.17□□□□□ -0.14
LINC00643-202ENST00000553426 RIPOR3Q96MK2 946 aa14.17□□□□□ -0.14
LINC00643-202ENST00000553426 MTMR9Q96QG7 549 aa14.17□□□□□ -0.14
LINC00643-202ENST00000553426 EMILIN2Q9BXX0 1053 aa14.17□□□□□ -0.14
LINC00643-202ENST00000553426 KCNH6Q9H252 994 aa14.17□□□□□ -0.14
LINC00643-202ENST00000553426 ADAM7Q9H2U9 754 aa14.17□□□□□ -0.14
LINC00643-202ENST00000553426 XPNPEP1Q9NQW7 623 aa14.17□□□□□ -0.14
LINC00643-202ENST00000553426 FAN1Q9Y2M0 1017 aa14.17□□□□□ -0.14
LINC00643-202ENST00000553426 PIEZO1Q92508 2521 aa14.17□□□□□ -0.14
LINC00643-202ENST00000553426 TSPAN1O60635 241 aa14.16□□□□□ -0.14
LINC00643-202ENST00000553426 MTHFRP42898 656 aa14.16□□□□□ -0.14
LINC00643-202ENST00000553426 SLC11A1P49279 550 aa14.16□□□□□ -0.14
LINC00643-202ENST00000553426 RARRES1P49788 294 aa14.16□□□□□ -0.14
LINC00643-202ENST00000553426 GUCY1B3Q02153 619 aa14.16□□□□□ -0.14
LINC00643-202ENST00000553426 ORC2Q13416 577 aaPredicted RBP14.16□□□□□ -0.14
LINC00643-202ENST00000553426 TRIM67Q6ZTA4 783 aa14.16□□□□□ -0.14
LINC00643-202ENST00000553426 HFE2Q6ZVN8 426 aa14.16□□□□□ -0.14
LINC00643-202ENST00000553426 TMEM173Q86WV6 379 aaPredicted RBP14.16□□□□□ -0.14
LINC00643-202ENST00000553426 ZNF280BQ86YH2 543 aa14.16□□□□□ -0.14
LINC00643-202ENST00000553426 IFNLR1Q8IU57 520 aaPredicted RBP14.16□□□□□ -0.14
LINC00643-202ENST00000553426 CCDC83Q8IWF9 413 aa14.16□□□□□ -0.14
LINC00643-202ENST00000553426 FAM184AQ8NB25 1140 aa14.16□□□□□ -0.14
LINC00643-202ENST00000553426 MCPH1Q8NEM0 835 aa14.16□□□□□ -0.14
LINC00643-202ENST00000553426 PIGOQ8TEQ8 1089 aa14.16□□□□□ -0.14
LINC00643-202ENST00000553426 ZSCAN31Q96LW9 406 aaPredicted RBP14.16□□□□□ -0.14
LINC00643-202ENST00000553426 NACC1Q96RE7 527 aa14.16□□□□□ -0.14
LINC00643-202ENST00000553426 NFKBIZQ9BYH8 718 aa14.16□□□□□ -0.14
LINC00643-202ENST00000553426 CSRNP2Q9H175 543 aa14.16□□□□□ -0.14
LINC00643-202ENST00000553426 TUFT1Q9NNX1 390 aa14.16□□□□□ -0.14
LINC00643-202ENST00000553426 TSHZ2Q9NRE2 1034 aa14.16□□□□□ -0.14
LINC00643-202ENST00000553426 DNAJB4Q9UDY4 337 aa14.16□□□□□ -0.14
LINC00643-202ENST00000553426 SSX2IPQ9Y2D8 614 aa14.16□□□□□ -0.14
LINC00643-202ENST00000553426 IPPQ9Y573 584 aa14.16□□□□□ -0.14
LINC00643-202ENST00000553426 TRIOO75962 3097 aa14.16□□□□□ -0.14
LINC00643-202ENST00000553426 USP34Q70CQ2 3546 aa14.16□□□□□ -0.14
LINC00643-202ENST00000553426 POTEMA6NI47 508 aa14.15□□□□□ -0.14
LINC00643-202ENST00000553426 USO1O60763 962 aaKnown RBP14.15□□□□□ -0.14
LINC00643-202ENST00000553426 POMCP01189 267 aa14.15□□□□□ -0.14
LINC00643-202ENST00000553426 ARL2P36404 184 aa14.15□□□□□ -0.14
LINC00643-202ENST00000553426 RBM25P49756 843 aaKnown RBP14.15□□□□□ -0.14
LINC00643-202ENST00000553426 ZXDAP98168 799 aa14.15□□□□□ -0.14
LINC00643-202ENST00000553426 NHLH1Q02575 133 aa14.15□□□□□ -0.14
LINC00643-202ENST00000553426 CAPSQ13938 189 aa14.15□□□□□ -0.14
LINC00643-202ENST00000553426 ATAT1Q5SQI0 421 aa14.15□□□□□ -0.14
LINC00643-202ENST00000553426 UBXN11Q5T124 520 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms