RNA–Protein interactions for RNA: ENST00000553353.5

FOXN3-203, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-203ENST00000553353 ARRDC4Q8NCT1 418 aa4.26□□□□□ -1.73
FOXN3-203ENST00000553353 NUP43Q8NFH3 380 aa4.26□□□□□ -1.73
FOXN3-203ENST00000553353 NEK9Q8TD19 979 aa4.26□□□□□ -1.73
FOXN3-203ENST00000553353 FERMT2Q96AC1 680 aa4.26□□□□□ -1.73
FOXN3-203ENST00000553353 RMDN1Q96DB5 314 aa4.26□□□□□ -1.73
FOXN3-203ENST00000553353 MYD88Q99836 296 aa4.26□□□□□ -1.73
FOXN3-203ENST00000553353 POLR3GLQ9BT43 218 aa4.26□□□□□ -1.73
FOXN3-203ENST00000553353 PRDM14Q9GZV8 571 aa4.26□□□□□ -1.73
FOXN3-203ENST00000553353 PHAXQ9H814 394 aaKnown RBP4.26□□□□□ -1.73
FOXN3-203ENST00000553353 UBE2ZQ9H832 354 aaPredicted RBP4.26□□□□□ -1.73
FOXN3-203ENST00000553353 CHST7Q9NS84 486 aa4.26□□□□□ -1.73
FOXN3-203ENST00000553353 RNF19AQ9NV58 838 aa4.26□□□□□ -1.73
FOXN3-203ENST00000553353 CWC25Q9NXE8 425 aaPredicted RBP4.26□□□□□ -1.73
FOXN3-203ENST00000553353 PRR13Q9NZ81 148 aa4.26□□□□□ -1.73
FOXN3-203ENST00000553353 ARAP2Q8WZ64 1704 aa4.26□□□□□ -1.73
FOXN3-203ENST00000553353 GPR179Q6PRD1 2367 aa4.26□□□□□ -1.73
FOXN3-203ENST00000553353 COL4A6Q14031 1691 aa4.26□□□□□ -1.73
FOXN3-203ENST00000553353 PLXNB2O15031 1838 aa4.25□□□□□ -1.73
FOXN3-203ENST00000553353 MYBBP1AQ9BQG0 1328 aaKnown RBP4.25□□□□□ -1.73
FOXN3-203ENST00000553353 LRRC37A2A6NM11 1700 aa4.25□□□□□ -1.73
FOXN3-203ENST00000553353 PATL2C9JE40 543 aaKnown RBP4.25□□□□□ -1.73
FOXN3-203ENST00000553353 SEPT4O43236 478 aa4.25□□□□□ -1.73
FOXN3-203ENST00000553353 CTNND1O60716 968 aaKnown RBP4.25□□□□□ -1.73
FOXN3-203ENST00000553353 IGSF3O75054 1194 aa4.25□□□□□ -1.73
FOXN3-203ENST00000553353 CLEC3AO75596 197 aa4.25□□□□□ -1.73
FOXN3-203ENST00000553353 ZNF205O95201 554 aa4.25□□□□□ -1.73
FOXN3-203ENST00000553353 HOXB7P09629 217 aa4.25□□□□□ -1.73
FOXN3-203ENST00000553353 CTSHP09668 335 aa4.25□□□□□ -1.73
FOXN3-203ENST00000553353 NBL1P41271 181 aa4.25□□□□□ -1.73
FOXN3-203ENST00000553353 GYG1P46976 350 aa4.25□□□□□ -1.73
FOXN3-203ENST00000553353 NCKAP1LP55160 1127 aa4.25□□□□□ -1.73
FOXN3-203ENST00000553353 HERVK_113P62684 666 aa4.25□□□□□ -1.73
FOXN3-203ENST00000553353 TAP1Q03518 808 aa4.25□□□□□ -1.73
FOXN3-203ENST00000553353 SPP2Q13103 211 aa4.25□□□□□ -1.73
FOXN3-203ENST00000553353 GRB10Q13322 594 aa4.25□□□□□ -1.73
FOXN3-203ENST00000553353 PUM1Q14671 1186 aaKnown RBP eCLIP4.25□□□□□ -1.73
FOXN3-203ENST00000553353 KIR3DS1Q14943 382 aa4.25□□□□□ -1.73
FOXN3-203ENST00000553353 PLEKHN1Q494U1 663 aaPredicted RBP4.25□□□□□ -1.73
FOXN3-203ENST00000553353 ANO1Q5XXA6 986 aa4.25□□□□□ -1.73
FOXN3-203ENST00000553353 CCDC129Q6ZRS4 1044 aa4.25□□□□□ -1.73
FOXN3-203ENST00000553353 TEKT1Q969V4 418 aa4.25□□□□□ -1.73
FOXN3-203ENST00000553353 EDC3Q96F86 508 aaKnown RBP4.25□□□□□ -1.73
FOXN3-203ENST00000553353 CRELD1Q96HD1 420 aa4.25□□□□□ -1.73
FOXN3-203ENST00000553353 YTHDC1Q96MU7 727 aaKnown RBP4.25□□□□□ -1.73
FOXN3-203ENST00000553353 CDADC1Q9BWV3 514 aa4.25□□□□□ -1.73
FOXN3-203ENST00000553353 USP40Q9NVE5 1235 aa4.25□□□□□ -1.73
FOXN3-203ENST00000553353 MSRAQ9UJ68 235 aa4.25□□□□□ -1.73
FOXN3-203ENST00000553353 USP24Q9UPU5 2620 aa4.25□□□□□ -1.73
FOXN3-203ENST00000553353 SPEGQ15772 3267 aa4.25□□□□□ -1.73
FOXN3-203ENST00000553353 UMODL1Q5DID0 1318 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 SETXQ7Z333 2677 aaKnown RBP4.24□□□□□ -1.73
FOXN3-203ENST00000553353 PRRC2BQ5JSZ5 2229 aaKnown RBP4.24□□□□□ -1.73
FOXN3-203ENST00000553353 A0A1W2PQ27 194 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 A0A1W2PQ64 194 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 A0A1W2PQC6 194 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 A0A1W2PQD8 194 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 DDTLA6NHG4 134 aaPredicted RBP4.24□□□□□ -1.73
FOXN3-203ENST00000553353 SRGAP3O43295 1099 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 PQBP1O60828 265 aaKnown RBP4.24□□□□□ -1.73
FOXN3-203ENST00000553353 CYBBP04839 570 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 CA3P07451 260 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 MSL3P1P0C860 447 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 HSPA5P11021 654 aaKnown RBP4.24□□□□□ -1.73
FOXN3-203ENST00000553353 VAV1P15498 845 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 IGHMBP2P38935 993 aaKnown RBP4.24□□□□□ -1.73
FOXN3-203ENST00000553353 HMGCS2P54868 508 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 VCPP55072 806 aaKnown RBP4.24□□□□□ -1.73
FOXN3-203ENST00000553353 TCP10Q12799 353 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 PPIGQ13427 754 aaKnown RBP eCLIP4.24□□□□□ -1.731e-8■□□□□ 8.5
FOXN3-203ENST00000553353 GRB14Q14449 540 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 MFSD14CQ5VZR4 134 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 HLA-DQA1Q5Y7H0 255 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 PSRC1Q6PGN9 363 aaPredicted RBP4.24□□□□□ -1.73
FOXN3-203ENST00000553353 PAQR3Q6TCH7 311 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 LIPIQ6XZB0 460 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 PLEKHH3Q7Z736 793 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 GPRC5AQ8NFJ5 357 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 EDAQ92838 391 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 FSD1Q9BTV5 496 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 IDI2Q9BXS1 227 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 LRRC3Q9BY71 257 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 RNF38Q9H0F5 515 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 CNNM2Q9H8M5 875 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 IL23AQ9NPF7 189 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 IGSF5Q9NSI5 407 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 HYPKQ9NX55 129 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 DLL3Q9NYJ7 618 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 ASPMQ8IZT6 3477 aa4.24□□□□□ -1.73
FOXN3-203ENST00000553353 TCF20Q9UGU0 1960 aaKnown RBP4.23□□□□□ -1.73
FOXN3-203ENST00000553353 ANKRD11Q6UB99 2663 aaPredicted RBP4.23□□□□□ -1.73
FOXN3-203ENST00000553353 TECTAO75443 2155 aa4.23□□□□□ -1.73
FOXN3-203ENST00000553353 SH3D21A4FU49 640 aa4.23□□□□□ -1.73
FOXN3-203ENST00000553353 ANKRD33BA6NCL7 494 aa4.23□□□□□ -1.73
FOXN3-203ENST00000553353 SLC15A5A6NIM6 579 aa4.23□□□□□ -1.73
FOXN3-203ENST00000553353 KBTBD13C9JR72 458 aa4.23□□□□□ -1.73
FOXN3-203ENST00000553353 F6X3S4 739 aa4.23□□□□□ -1.73
FOXN3-203ENST00000553353 CD4P01730 458 aa4.23□□□□□ -1.73
FOXN3-203ENST00000553353 GARTP22102 1010 aa4.23□□□□□ -1.73
FOXN3-203ENST00000553353 HIBADHP31937 336 aaKnown RBP4.23□□□□□ -1.73
FOXN3-203ENST00000553353 LIMS1P48059 325 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms