RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 COL8A1P27658 744 aa6.17□□□□□ -1.42
HOXB3-213ENST00000552000 CA8P35219 290 aa6.17□□□□□ -1.42
HOXB3-213ENST00000552000 PBX3P40426 434 aa6.17□□□□□ -1.42
HOXB3-213ENST00000552000 NMIQ13287 307 aaPredicted RBP6.17□□□□□ -1.42
HOXB3-213ENST00000552000 SLC35G1Q2M3R5 365 aa6.17□□□□□ -1.42
HOXB3-213ENST00000552000 MCMDC2Q4G0Z9 681 aa6.17□□□□□ -1.42
HOXB3-213ENST00000552000 ATAT1Q5SQI0 421 aa6.17□□□□□ -1.42
HOXB3-213ENST00000552000 SIX5Q8N196 739 aa6.17□□□□□ -1.42
HOXB3-213ENST00000552000 SAMD3Q8N6K7 520 aa6.17□□□□□ -1.42
HOXB3-213ENST00000552000 FEZF2Q8TBJ5 459 aa6.17□□□□□ -1.42
HOXB3-213ENST00000552000 TRAPPC12Q8WVT3 735 aa6.17□□□□□ -1.42
HOXB3-213ENST00000552000 SEPT1Q8WYJ6 367 aa6.17□□□□□ -1.42
HOXB3-213ENST00000552000 MTMR8Q96EF0 704 aa6.17□□□□□ -1.42
HOXB3-213ENST00000552000 PIGSQ96S52 555 aa6.17□□□□□ -1.42
HOXB3-213ENST00000552000 ZSCAN10Q96SZ4 725 aaPredicted RBP6.17□□□□□ -1.42
HOXB3-213ENST00000552000 ADAM2Q99965 735 aa6.17□□□□□ -1.42
HOXB3-213ENST00000552000 SENP7Q9BQF6 1050 aa6.17□□□□□ -1.42
HOXB3-213ENST00000552000 CELF4Q9BZC1 486 aaKnown RBP6.17□□□□□ -1.42
HOXB3-213ENST00000552000 CYP26B1Q9NR63 512 aa6.17□□□□□ -1.42
HOXB3-213ENST00000552000 ERAP1Q9NZ08 941 aa6.17□□□□□ -1.42
HOXB3-213ENST00000552000 GDF2Q9UK05 429 aaPredicted RBP6.17□□□□□ -1.42
HOXB3-213ENST00000552000 GINS2Q9Y248 185 aa6.17□□□□□ -1.42
HOXB3-213ENST00000552000 HCFC2Q9Y5Z7 792 aa6.17□□□□□ -1.42
HOXB3-213ENST00000552000 ZFHX4Q86UP3 3567 aa6.17□□□□□ -1.42
HOXB3-213ENST00000552000 MYO18BQ8IUG5 2567 aa6.17□□□□□ -1.42
HOXB3-213ENST00000552000 ZMYM6O95789 1325 aa6.17□□□□□ -1.42
HOXB3-213ENST00000552000 GCN1Q92616 2671 aaKnown RBP6.17□□□□□ -1.42
HOXB3-213ENST00000552000 LAMA4Q16363 1823 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 C2orf71A6NGG8 1288 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 SHISA8B8ZZ34 492 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 C9IYK1 514 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 ATP9AO75110 1047 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 RPS6KA5O75582 802 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 STAM2O75886 525 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 EOMESO95936 686 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 RPLP2P05387 115 aaKnown RBP6.16□□□□□ -1.42
HOXB3-213ENST00000552000 KCNA2P16389 499 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 RFX1P22670 979 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 PLCB3Q01970 1234 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 KRT17Q04695 432 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 TDGQ13569 410 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 SMC1AQ14683 1233 aaKnown RBP6.16□□□□□ -1.42
HOXB3-213ENST00000552000 NR6A1Q15406 480 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 ST3GAL2Q16842 350 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 C20orf194Q5TEA3 1177 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 KIAA1841Q6NSI8 718 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 KCNT2Q6UVM3 1135 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 LRRC55Q6ZSA7 311 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 NLRX1Q86UT6 975 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 MRPL43Q8N983 215 aaKnown RBP6.16□□□□□ -1.42
HOXB3-213ENST00000552000 LRRN4Q8WUT4 740 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 PIBF1Q8WXW3 757 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 RUBCNQ92622 972 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 EVI5LQ96CN4 794 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 ZNF558Q96NG5 402 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 TMEM117Q9H0C3 514 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 SMARCAD1Q9H4L7 1026 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 ATP6V0A4Q9HBG4 840 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 C1orf112Q9NSG2 853 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 MAD2L2Q9UI95 211 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 DUSP12Q9UNI6 340 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 USTQ9Y2C2 406 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 NOC2LQ9Y3T9 749 aaKnown RBP6.16□□□□□ -1.42
HOXB3-213ENST00000552000 PCDHA2Q9Y5H9 948 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 FRMPD4Q14CM0 1322 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 KDM3AQ9Y4C1 1321 aa6.16□□□□□ -1.42
HOXB3-213ENST00000552000 ZNF213O14771 459 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 TRIM66O15016 1216 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 NARSO43776 548 aaKnown RBP6.15□□□□□ -1.42
HOXB3-213ENST00000552000 EPCAMP16422 314 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 PPM1AP35813 382 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 POU4F2Q12837 409 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 TRAF1Q13077 416 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 PLCB4Q15147 1175 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 SPECC1Q5M775 1068 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 IFIT1BQ5T764 474 aaKnown RBP6.15□□□□□ -1.42
HOXB3-213ENST00000552000 PCNX4Q63HM2 1172 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 XRRA1Q6P2D8 792 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 ZC3H14Q6PJT7 736 aaKnown RBP6.15□□□□□ -1.42
HOXB3-213ENST00000552000 USP17L6PQ6QN14 398 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 TMC5Q6UXY8 1006 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 SLC24A5Q71RS6 500 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 OTOP3Q7RTS5 596 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 TMEM87AQ8NBN3 555 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 GIMAP8Q8ND71 665 aaPredicted RBP6.15□□□□□ -1.42
HOXB3-213ENST00000552000 EDARADDQ8WWZ3 215 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 AUTS2Q8WXX7 1259 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 ACSF2Q96CM8 615 aaPredicted RBP6.15□□□□□ -1.42
HOXB3-213ENST00000552000 PPP1R16BQ96T49 567 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 PCYT2Q99447 389 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 KRTAP4-12Q9BQ66 201 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 UBAC1Q9BSL1 405 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 KDM4CQ9H3R0 1056 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 TBC1D17Q9HA65 648 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 RGS18Q9NS28 235 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 RNF19AQ9NV58 838 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 DZANK1Q9NVP4 752 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 TMEM161AQ9NX61 479 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 SPG21Q9NZD8 308 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 ZSWIM5Q9P217 1185 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms