RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 USP49Q70CQ1 688 aa28.64■■■□□ 2.18
CPSF6-205ENST00000550075 HACE1Q8IYU2 909 aa28.64■■■□□ 2.18
CPSF6-205ENST00000550075 DAW1Q8N136 415 aa28.64■■■□□ 2.18
CPSF6-205ENST00000550075 LRRC43Q8N309 656 aa28.64■■■□□ 2.18
CPSF6-205ENST00000550075 MAFAQ8NHW3 353 aaPredicted RBP28.64■■■□□ 2.18
CPSF6-205ENST00000550075 C11orf84Q9BUA3 381 aaPredicted RBP28.64■■■□□ 2.18
CPSF6-205ENST00000550075 MRPL9Q9BYD2 267 aaKnown RBP28.64■■■□□ 2.18
CPSF6-205ENST00000550075 TRIM6Q9C030 488 aaPredicted RBP28.64■■■□□ 2.18
CPSF6-205ENST00000550075 AAASQ9NRG9 546 aa28.64■■■□□ 2.18
CPSF6-205ENST00000550075 BLOC1S4Q9NUP1 217 aa28.64■■■□□ 2.18
CPSF6-205ENST00000550075 ODF2LQ9ULJ1 636 aa28.64■■■□□ 2.18
CPSF6-205ENST00000550075 PCDHB2Q9Y5E7 798 aa28.64■■■□□ 2.18
CPSF6-205ENST00000550075 KIAA1671Q9BY89 1806 aa28.64■■■□□ 2.17
CPSF6-205ENST00000550075 CCDC169A6NNP5 214 aa28.63■■■□□ 2.17
CPSF6-205ENST00000550075 CUTAO60888 179 aa28.63■■■□□ 2.17
CPSF6-205ENST00000550075 KRT18P05783 430 aaKnown RBP28.63■■■□□ 2.17
CPSF6-205ENST00000550075 ARF4P18085 180 aaPredicted RBP28.63■■■□□ 2.17
CPSF6-205ENST00000550075 BMPR1AP36894 532 aa28.63■■■□□ 2.17
CPSF6-205ENST00000550075 MAPK7Q13164 816 aa28.63■■■□□ 2.17
CPSF6-205ENST00000550075 GLB1LQ6UWU2 654 aa28.63■■■□□ 2.17
CPSF6-205ENST00000550075 CPB2Q96IY4 423 aa28.63■■■□□ 2.17
CPSF6-205ENST00000550075 PLVAPQ9BX97 442 aa28.63■■■□□ 2.17
CPSF6-205ENST00000550075 FZD8Q9H461 694 aa28.63■■■□□ 2.17
CPSF6-205ENST00000550075 POLD4Q9HCU8 107 aa28.63■■■□□ 2.17
CPSF6-205ENST00000550075 TRANK1O15050 2925 aa28.63■■■□□ 2.17
CPSF6-205ENST00000550075 C5orf67F2Z3F1 127 aa28.62■■■□□ 2.17
CPSF6-205ENST00000550075 RFXAPO00287 272 aa28.62■■■□□ 2.17
CPSF6-205ENST00000550075 SMTNP53814 917 aa28.62■■■□□ 2.17
CPSF6-205ENST00000550075 DNM1Q05193 864 aaKnown RBP28.62■■■□□ 2.17
CPSF6-205ENST00000550075 RAD51AP2Q09MP3 1159 aa28.62■■■□□ 2.17
CPSF6-205ENST00000550075 PRPF4BQ13523 1007 aaKnown RBP28.62■■■□□ 2.17
CPSF6-205ENST00000550075 DHX8Q14562 1220 aaKnown RBP28.62■■■□□ 2.17
CPSF6-205ENST00000550075 MCM6Q14566 821 aa28.62■■■□□ 2.17
CPSF6-205ENST00000550075 HELQQ8TDG4 1101 aa28.62■■■□□ 2.17
CPSF6-205ENST00000550075 CCDC113Q9H0I3 377 aa28.62■■■□□ 2.17
CPSF6-205ENST00000550075 KMT5AQ9NQR1 393 aa28.62■■■□□ 2.17
CPSF6-205ENST00000550075 RNF19AQ9NV58 838 aa28.62■■■□□ 2.17
CPSF6-205ENST00000550075 LARSQ9P2J5 1176 aaKnown RBP28.62■■■□□ 2.17
CPSF6-205ENST00000550075 RBM19Q9Y4C8 960 aaKnown RBP28.62■■■□□ 2.17
CPSF6-205ENST00000550075 N4BP3O15049 544 aa28.61■■■□□ 2.17
CPSF6-205ENST00000550075 B4GALT5O43286 388 aa28.61■■■□□ 2.17
CPSF6-205ENST00000550075 LIG1P18858 919 aa28.61■■■□□ 2.17
CPSF6-205ENST00000550075 POU3F3P20264 500 aaPredicted RBP28.61■■■□□ 2.17
CPSF6-205ENST00000550075 DDIT3P35638 169 aa28.61■■■□□ 2.17
CPSF6-205ENST00000550075 NPTX2P47972 431 aa28.61■■■□□ 2.17
CPSF6-205ENST00000550075 GPM6BQ13491 265 aa28.61■■■□□ 2.17
CPSF6-205ENST00000550075 CLLU1OSQ5K130 101 aa28.61■■■□□ 2.17
CPSF6-205ENST00000550075 UBXN11Q5T124 520 aa28.61■■■□□ 2.17
CPSF6-205ENST00000550075 SLC27A1Q6PCB7 646 aa28.61■■■□□ 2.17
CPSF6-205ENST00000550075 CASD1Q96PB1 797 aa28.61■■■□□ 2.17
CPSF6-205ENST00000550075 KIFC3Q9BVG8 833 aa28.61■■■□□ 2.17
CPSF6-205ENST00000550075 LMCD1Q9NZU5 365 aa28.61■■■□□ 2.17
CPSF6-205ENST00000550075 H3BNC9 293 aa28.6■■■□□ 2.17
CPSF6-205ENST00000550075 K7ERI5 159 aa28.6■■■□□ 2.17
CPSF6-205ENST00000550075 ACKR2O00590 384 aa28.6■■■□□ 2.17
CPSF6-205ENST00000550075 TBCAO75347 108 aaKnown RBP28.6■■■□□ 2.17
CPSF6-205ENST00000550075 LINC00271P0C7V0 271 aa28.6■■■□□ 2.17
CPSF6-205ENST00000550075 PLS3P13797 630 aa28.6■■■□□ 2.17
CPSF6-205ENST00000550075 LAG3P18627 525 aa28.6■■■□□ 2.17
CPSF6-205ENST00000550075 STAT6P42226 847 aa28.6■■■□□ 2.17
CPSF6-205ENST00000550075 ME1P48163 572 aa28.6■■■□□ 2.17
CPSF6-205ENST00000550075 KRT85P78386 507 aa28.6■■■□□ 2.17
CPSF6-205ENST00000550075 PTPROQ16827 1216 aa28.6■■■□□ 2.17
CPSF6-205ENST00000550075 CSPP1Q1MSJ5 1256 aa28.6■■■□□ 2.17
CPSF6-205ENST00000550075 NAALADL2Q58DX5 795 aa28.6■■■□□ 2.17
CPSF6-205ENST00000550075 MRPL10Q7Z7H8 261 aaKnown RBP28.6■■■□□ 2.17
CPSF6-205ENST00000550075 SPIRE2Q8WWL2 714 aa28.6■■■□□ 2.17
CPSF6-205ENST00000550075 UBN1Q9NPG3 1134 aa28.6■■■□□ 2.17
CPSF6-205ENST00000550075 PCDHB12Q9Y5F1 795 aa28.6■■■□□ 2.17
CPSF6-205ENST00000550075 A0A1B0GUA9 196 aa28.59■■■□□ 2.17
CPSF6-205ENST00000550075 H0YCG3 227 aa28.59■■■□□ 2.17
CPSF6-205ENST00000550075 FAM13AO94988 1023 aa28.59■■■□□ 2.17
CPSF6-205ENST00000550075 NCLP19338 710 aaKnown RBP28.59■■■□□ 2.17
CPSF6-205ENST00000550075 APBB1IPQ7Z5R6 666 aaPredicted RBP28.59■■■□□ 2.17
CPSF6-205ENST00000550075 URGCPQ8TCY9 931 aa28.59■■■□□ 2.17
CPSF6-205ENST00000550075 LRRC15Q8TF66 581 aa28.59■■■□□ 2.17
CPSF6-205ENST00000550075 LPPQ93052 612 aa28.59■■■□□ 2.17
CPSF6-205ENST00000550075 P2RX5Q93086 422 aa28.59■■■□□ 2.17
CPSF6-205ENST00000550075 REEP2Q9BRK0 252 aa28.59■■■□□ 2.17
CPSF6-205ENST00000550075 ADPGKQ9BRR6 497 aa28.59■■■□□ 2.17
CPSF6-205ENST00000550075 ITGA4P13612 1032 aa28.58■■■□□ 2.17
CPSF6-205ENST00000550075 ARSHQ5FYA8 562 aa28.58■■■□□ 2.17
CPSF6-205ENST00000550075 SV2BQ7L1I2 683 aa28.58■■■□□ 2.17
CPSF6-205ENST00000550075 EIF2AQ9BY44 585 aaKnown RBP28.58■■■□□ 2.17
CPSF6-205ENST00000550075 TMEM134Q9H6X4 195 aa28.58■■■□□ 2.17
CPSF6-205ENST00000550075 RSAD1Q9HA92 442 aa28.58■■■□□ 2.17
CPSF6-205ENST00000550075 TYW1Q9NV66 732 aaKnown RBP28.58■■■□□ 2.17
CPSF6-205ENST00000550075 ARHGAP28Q9P2N2 729 aa28.58■■■□□ 2.17
CPSF6-205ENST00000550075 ZDHHC9Q9Y397 364 aa28.58■■■□□ 2.17
CPSF6-205ENST00000550075 IPPQ9Y573 584 aa28.58■■■□□ 2.17
CPSF6-205ENST00000550075 MTCH2Q9Y6C9 303 aa28.58■■■□□ 2.17
CPSF6-205ENST00000550075 CARNS1A5YM72 827 aa28.57■■■□□ 2.16
CPSF6-205ENST00000550075 SFI1A8K8P3 1242 aa28.57■■■□□ 2.16
CPSF6-205ENST00000550075 LPXNO60711 386 aa28.57■■■□□ 2.16
CPSF6-205ENST00000550075 NPTXRO95502 500 aa28.57■■■□□ 2.16
CPSF6-205ENST00000550075 SCP2P22307 547 aa28.57■■■□□ 2.16
CPSF6-205ENST00000550075 LONRF3Q496Y0 759 aa28.57■■■□□ 2.16
CPSF6-205ENST00000550075 NOMO2Q5JPE7 1267 aa28.57■■■□□ 2.16
CPSF6-205ENST00000550075 MICALL1Q8N3F8 863 aa28.57■■■□□ 2.16
CPSF6-205ENST00000550075 LMAN2LQ9H0V9 348 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms