RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 NT5C1BQ96P26 610 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 PSMB7Q99436 277 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 PLVAPQ9BX97 442 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 PACSIN1Q9BY11 444 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 ATP6V0A4Q9HBG4 840 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 TMEM8AQ9HCN3 771 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 UBE2TQ9NPD8 197 aaPredicted RBP9.68□□□□□ -0.86
TMEM116-209ENST00000550020 GDF3Q9NR23 364 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 RBM12Q9NTZ6 932 aaKnown RBP9.68□□□□□ -0.86
TMEM116-209ENST00000550020 SEPT11Q9NVA2 429 aaKnown RBP9.68□□□□□ -0.86
TMEM116-209ENST00000550020 SLC9A2Q9UBY0 812 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 RBBP6Q7Z6E9 1792 aaKnown RBP9.68□□□□□ -0.86
TMEM116-209ENST00000550020 DENND3A2RUS2 1198 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 SPATA31C2B4DYI2 1134 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 H3BQF6 201 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 KRIT1O00522 736 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 RTN2O75298 545 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 HEXIM1O94992 359 aaKnown RBP9.67□□□□□ -0.86
TMEM116-209ENST00000550020 GGPS1O95749 300 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 CCNE2O96020 404 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 LDHAP00338 332 aaKnown RBP9.67□□□□□ -0.86
TMEM116-209ENST00000550020 POTEJP0CG39 1038 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 RFC5P40937 340 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 NPTX2P47972 431 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 GPC5P78333 572 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 MTMR3Q13615 1198 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 ARHGAP44Q17R89 818 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 SH3D19Q5HYK7 790 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 SAMD7Q7Z3H4 446 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 KSR1Q8IVT5 923 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 GPD1LQ8N335 351 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 RDH13Q8NBN7 331 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 TMEM161BQ8NDZ6 487 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 REPS2Q8NFH8 660 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 FAM76AQ8TAV0 307 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 SLC35G2Q8TBE7 412 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 SCFD2Q8WU76 684 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 TRIM11Q96F44 468 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 HES6Q96HZ4 224 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 ZFP91Q96JP5 570 aaPredicted RBP9.67□□□□□ -0.86
TMEM116-209ENST00000550020 KRT12Q99456 494 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 SYT11Q9BT88 431 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 PDGFDQ9GZP0 370 aaPredicted RBP9.67□□□□□ -0.86
TMEM116-209ENST00000550020 RAB17Q9H0T7 212 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 CARD9Q9H257 536 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 PCIF1Q9H4Z3 704 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 POLD4Q9HCU8 107 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 ST7Q9NRC1 585 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 GABBR1Q9UBS5 961 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 TMEM59LQ9UK28 342 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 COQ4Q9Y3A0 265 aa9.67□□□□□ -0.86
TMEM116-209ENST00000550020 SYNGAP1Q96PV0 1343 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 GOLGA6L10A6NI86 522 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 ZNF233A6NK53 670 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 RNF40O75150 1001 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 ZBTB7AO95365 584 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 SUPT20HL2P0C7V6 817 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 CNGA1P29973 690 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 ICAM3P32942 547 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 GCLMP48507 274 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 LMAN1P49257 510 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 PDE6CP51160 858 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 GPC3P51654 580 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 HMGCS2P54868 508 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 GUCY2DQ02846 1103 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 UGCGQ16739 394 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 WDR44Q5JSH3 913 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 CFAP58Q5T655 872 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 ANGEL2Q5VTE6 544 aaKnown RBP9.66□□□□□ -0.86
TMEM116-209ENST00000550020 FAM160B1Q5W0V3 765 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 PHLDB3Q6NSJ2 640 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 SWSAP1Q6NVH7 229 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 GJB7Q6PEY0 223 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 NT5DC3Q86UY8 548 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 GPIHBP1Q8IV16 184 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 EFCAB13Q8IY85 973 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 FAM71AQ8IYT1 594 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 GPC2Q8N158 579 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 C1orf131Q8NDD1 294 aaKnown RBP9.66□□□□□ -0.86
TMEM116-209ENST00000550020 FBXL13Q8NEE6 735 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 LMO3Q8TAP4 145 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 LNX1Q8TBB1 728 aaPredicted RBP9.66□□□□□ -0.86
TMEM116-209ENST00000550020 POMGNT1Q8WZA1 660 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 KLRG1Q96E93 195 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 BICD1Q96G01 975 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 MS4A14Q96JA4 679 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 MFSD14AQ96MC6 490 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 RPS6KC1Q96S38 1066 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 CBWD1Q9BRT8 395 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 ISCUQ9H1K1 167 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 TAF1DQ9H5J8 278 aaPredicted RBP9.66□□□□□ -0.86
TMEM116-209ENST00000550020 EPB41L5Q9HCM4 733 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 CYP26B1Q9NR63 512 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 FAM114A2Q9NRY5 505 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 NRBP2Q9NSY0 501 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 CYP39A1Q9NYL5 469 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 PPP1R1BQ9UD71 204 aaPredicted RBP9.66□□□□□ -0.86
TMEM116-209ENST00000550020 SEPT9Q9UHD8 586 aaPredicted RBP9.66□□□□□ -0.86
TMEM116-209ENST00000550020 DMGDHQ9UI17 866 aaKnown RBP9.66□□□□□ -0.86
TMEM116-209ENST00000550020 RASAL2Q9UJF2 1139 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms