RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 ASAP2O43150 1006 aa15.18■□□□□ 0.02
TROAP-211ENST00000549891 CDKL5O76039 1030 aa15.18■□□□□ 0.02
TROAP-211ENST00000549891 KLRC2P26717 231 aa15.18■□□□□ 0.02
TROAP-211ENST00000549891 PCBP1Q15365 356 aaKnown RBP eCLIP15.18■□□□□ 0.02
TROAP-211ENST00000549891 PTPN14Q15678 1187 aa15.18■□□□□ 0.02
TROAP-211ENST00000549891 PPP4R3AQ6IN85 833 aa15.18■□□□□ 0.02
TROAP-211ENST00000549891 ELMSAN1Q6PJG2 1045 aa15.18■□□□□ 0.02
TROAP-211ENST00000549891 TMC5Q6UXY8 1006 aa15.18■□□□□ 0.02
TROAP-211ENST00000549891 OTUD6AQ7L8S5 288 aa15.18■□□□□ 0.02
TROAP-211ENST00000549891 OTOP3Q7RTS5 596 aa15.18■□□□□ 0.02
TROAP-211ENST00000549891 MRPL10Q7Z7H8 261 aaKnown RBP15.18■□□□□ 0.02
TROAP-211ENST00000549891 CNNM3Q8NE01 707 aa15.18■□□□□ 0.02
TROAP-211ENST00000549891 TCP11Q8WWU5 503 aa15.18■□□□□ 0.02
TROAP-211ENST00000549891 TMEM175Q9BSA9 504 aa15.18■□□□□ 0.02
TROAP-211ENST00000549891 UBN1Q9NPG3 1134 aa15.18■□□□□ 0.02
TROAP-211ENST00000549891 MRPL17Q9NRX2 175 aaKnown RBP15.18■□□□□ 0.02
TROAP-211ENST00000549891 FAM86C1Q9NVL1 165 aa15.18■□□□□ 0.02
TROAP-211ENST00000549891 LIMD1Q9UGP4 676 aa15.18■□□□□ 0.02
TROAP-211ENST00000549891 DPP7Q9UHL4 492 aa15.18■□□□□ 0.02
TROAP-211ENST00000549891 SSX2IPQ9Y2D8 614 aa15.18■□□□□ 0.02
TROAP-211ENST00000549891 FAN1Q9Y2M0 1017 aa15.18■□□□□ 0.02
TROAP-211ENST00000549891 PLXNA3P51805 1871 aa15.18■□□□□ 0.02
TROAP-211ENST00000549891 EML1O00423 815 aa15.17■□□□□ 0.02
TROAP-211ENST00000549891 TBX3O15119 743 aa15.17■□□□□ 0.02
TROAP-211ENST00000549891 SLC37A4O43826 429 aa15.17■□□□□ 0.02
TROAP-211ENST00000549891 MARCH6O60337 910 aa15.17■□□□□ 0.02
TROAP-211ENST00000549891 ASGR2P07307 311 aa15.17■□□□□ 0.02
TROAP-211ENST00000549891 SRGAP2CP0DJJ0 459 aa15.17■□□□□ 0.02
TROAP-211ENST00000549891 NPY5RQ15761 445 aa15.17■□□□□ 0.02
TROAP-211ENST00000549891 ASTLQ6HA08 431 aaPredicted RBP15.17■□□□□ 0.02
TROAP-211ENST00000549891 AGMOQ6ZNB7 445 aa15.17■□□□□ 0.02
TROAP-211ENST00000549891 C15orf39Q6ZRI6 1047 aa15.17■□□□□ 0.02
TROAP-211ENST00000549891 CCDC149Q6ZUS6 474 aa15.17■□□□□ 0.02
TROAP-211ENST00000549891 NEK8Q86SG6 692 aa15.17■□□□□ 0.02
TROAP-211ENST00000549891 GPR149Q86SP6 731 aa15.17■□□□□ 0.02
TROAP-211ENST00000549891 ZNF280BQ86YH2 543 aa15.17■□□□□ 0.02
TROAP-211ENST00000549891 BCL7CQ8WUZ0 217 aaPredicted RBP15.17■□□□□ 0.02
TROAP-211ENST00000549891 PRPF31Q8WWY3 499 aaKnown RBP15.17■□□□□ 0.02
TROAP-211ENST00000549891 TM6SF1Q9BZW5 370 aa15.17■□□□□ 0.02
TROAP-211ENST00000549891 DHX33Q9H6R0 707 aaKnown RBP15.17■□□□□ 0.02
TROAP-211ENST00000549891 KCNMB3Q9NPA1 279 aa15.17■□□□□ 0.02
TROAP-211ENST00000549891 VAV3Q9UKW4 847 aa15.17■□□□□ 0.02
TROAP-211ENST00000549891 MTCL1Q9Y4B5 1905 aaKnown RBP15.16■□□□□ 0.02
TROAP-211ENST00000549891 DDHD2O94830 711 aa15.16■□□□□ 0.02
TROAP-211ENST00000549891 ERLIN2O94905 339 aa15.16■□□□□ 0.02
TROAP-211ENST00000549891 NCLP19338 710 aaKnown RBP15.16■□□□□ 0.02
TROAP-211ENST00000549891 AXLP30530 894 aa15.16■□□□□ 0.02
TROAP-211ENST00000549891 CLCN4P51793 760 aa15.16■□□□□ 0.02
TROAP-211ENST00000549891 CLCN5P51795 746 aa15.16■□□□□ 0.02
TROAP-211ENST00000549891 NPEPPSP55786 919 aa15.16■□□□□ 0.02
TROAP-211ENST00000549891 NCBP1Q09161 790 aaKnown RBP15.16■□□□□ 0.02
TROAP-211ENST00000549891 LAMTOR4Q0VGL1 99 aa15.16■□□□□ 0.02
TROAP-211ENST00000549891 STK3Q13188 491 aa15.16■□□□□ 0.02
TROAP-211ENST00000549891 KANK3Q6NY19 840 aa15.16■□□□□ 0.02
TROAP-211ENST00000549891 C4orf19Q8IY42 314 aa15.16■□□□□ 0.02
TROAP-211ENST00000549891 TMEM143Q96AN5 459 aa15.16■□□□□ 0.02
TROAP-211ENST00000549891 AIFM3Q96NN9 605 aa15.16■□□□□ 0.02
TROAP-211ENST00000549891 KLHL5Q96PQ7 755 aa15.16■□□□□ 0.02
TROAP-211ENST00000549891 LXNQ9BS40 222 aa15.16■□□□□ 0.02
TROAP-211ENST00000549891 PHF20Q9BVI0 1012 aa15.16■□□□□ 0.02
TROAP-211ENST00000549891 VN1R3Q9BXE9 311 aa15.16■□□□□ 0.02
TROAP-211ENST00000549891 CFAP54Q96N23 3096 aa15.15■□□□□ 0.02
TROAP-211ENST00000549891 PROB1E7EW31 1015 aa15.15■□□□□ 0.02
TROAP-211ENST00000549891 NRP1O14786 923 aa15.15■□□□□ 0.02
TROAP-211ENST00000549891 CCNT1O60563 726 aaKnown RBP15.15■□□□□ 0.02
TROAP-211ENST00000549891 NR1I2O75469 434 aa15.15■□□□□ 0.02
TROAP-211ENST00000549891 SOD2P04179 222 aa15.15■□□□□ 0.02
TROAP-211ENST00000549891 SSBP05455 408 aaKnown RBP eCLIP15.15■□□□□ 0.02
TROAP-211ENST00000549891 URODP06132 367 aa15.15■□□□□ 0.02
TROAP-211ENST00000549891 CNPP09543 421 aaKnown RBP15.15■□□□□ 0.02
TROAP-211ENST00000549891 ITGA4P13612 1032 aa15.15■□□□□ 0.02
TROAP-211ENST00000549891 YWHABP31946 246 aaKnown RBP15.15■□□□□ 0.02
TROAP-211ENST00000549891 MXD4Q14582 209 aaPredicted RBP15.15■□□□□ 0.02
TROAP-211ENST00000549891 EMC2Q15006 297 aa15.15■□□□□ 0.02
TROAP-211ENST00000549891 EPHA7Q15375 998 aa15.15■□□□□ 0.02
TROAP-211ENST00000549891 CYP26C1Q6V0L0 522 aa15.15■□□□□ 0.02
TROAP-211ENST00000549891 SLFN12Q8IYM2 578 aa15.15■□□□□ 0.02
TROAP-211ENST00000549891 TMEM105Q8N8V8 129 aa15.15■□□□□ 0.02
TROAP-211ENST00000549891 RNF149Q8NC42 400 aa15.15■□□□□ 0.02
TROAP-211ENST00000549891 KCNJ14Q9UNX9 436 aa15.15■□□□□ 0.02
TROAP-211ENST00000549891 ZFHX2Q9C0A1 2572 aaPredicted RBP15.14■□□□□ 0.01
TROAP-211ENST00000549891 MYO15AQ9UKN7 3530 aa15.14■□□□□ 0.01
TROAP-211ENST00000549891 BAG4O95429 457 aaKnown RBP15.14■□□□□ 0.01
TROAP-211ENST00000549891 POMCP01189 267 aa15.14■□□□□ 0.01
TROAP-211ENST00000549891 ADH1AP07327 375 aa15.14■□□□□ 0.01
TROAP-211ENST00000549891 HOXA11P31270 313 aaPredicted RBP15.14■□□□□ 0.01
TROAP-211ENST00000549891 TDGQ13569 410 aa15.14■□□□□ 0.01
TROAP-211ENST00000549891 TFDP1Q14186 410 aa15.14■□□□□ 0.01
TROAP-211ENST00000549891 XKR9Q5GH70 373 aa15.14■□□□□ 0.01
TROAP-211ENST00000549891 UBXN11Q5T124 520 aa15.14■□□□□ 0.01
TROAP-211ENST00000549891 NOTUMQ6P988 496 aa15.14■□□□□ 0.01
TROAP-211ENST00000549891 FERMT3Q86UX7 667 aa15.14■□□□□ 0.01
TROAP-211ENST00000549891 HACE1Q8IYU2 909 aa15.14■□□□□ 0.01
TROAP-211ENST00000549891 ZNF579Q8NAF0 562 aaKnown RBP15.14■□□□□ 0.01
TROAP-211ENST00000549891 STAMQ92783 540 aa15.14■□□□□ 0.01
TROAP-211ENST00000549891 CCDC51Q96ER9 411 aa15.14■□□□□ 0.01
TROAP-211ENST00000549891 MTRQ99707 1265 aa15.14■□□□□ 0.01
TROAP-211ENST00000549891 SMOC2Q9H3U7 446 aa15.14■□□□□ 0.01
TROAP-211ENST00000549891 ZSWIM4Q9H7M6 989 aa15.14■□□□□ 0.01
TROAP-211ENST00000549891 MINDY3Q9H8M7 445 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms