RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 CSF2RBP32927 897 aa5.32□□□□□ -1.56
PTCH1-216ENST00000548379 FXR1P51114 621 aaKnown RBP eCLIP5.32□□□□□ -1.56
PTCH1-216ENST00000548379 STAT5BP51692 787 aa5.32□□□□□ -1.56
PTCH1-216ENST00000548379 KCNQ1P51787 676 aa5.32□□□□□ -1.56
PTCH1-216ENST00000548379 SESN2P58004 480 aaPredicted RBP5.32□□□□□ -1.56
PTCH1-216ENST00000548379 MGAT5Q09328 741 aa5.32□□□□□ -1.56
PTCH1-216ENST00000548379 FAM26FQ5R3K3 315 aa5.32□□□□□ -1.56
PTCH1-216ENST00000548379 IFIT1BQ5T764 474 aaKnown RBP5.32□□□□□ -1.56
PTCH1-216ENST00000548379 LMBR1LQ6UX01 489 aa5.32□□□□□ -1.56
PTCH1-216ENST00000548379 TAS1R1Q7RTX1 841 aa5.32□□□□□ -1.56
PTCH1-216ENST00000548379 CATIPQ7Z7H3 387 aa5.32□□□□□ -1.56
PTCH1-216ENST00000548379 IFNL2Q8IZJ0 200 aa5.32□□□□□ -1.56
PTCH1-216ENST00000548379 POU5F2Q8N7G0 328 aa5.32□□□□□ -1.56
PTCH1-216ENST00000548379 GPR156Q8NFN8 814 aa5.32□□□□□ -1.56
PTCH1-216ENST00000548379 OR2I1PQ8NGU4 316 aa5.32□□□□□ -1.56
PTCH1-216ENST00000548379 GFM2Q969S9 779 aaKnown RBP5.32□□□□□ -1.56
PTCH1-216ENST00000548379 CCDC136Q96JN2 1154 aa5.32□□□□□ -1.56
PTCH1-216ENST00000548379 SPATA25Q9BR10 227 aa5.32□□□□□ -1.56
PTCH1-216ENST00000548379 L2HGDHQ9H9P8 463 aa5.32□□□□□ -1.56
PTCH1-216ENST00000548379 DMRT3Q9NQL9 472 aa5.32□□□□□ -1.56
PTCH1-216ENST00000548379 RBM12Q9NTZ6 932 aaKnown RBP5.32□□□□□ -1.56
PTCH1-216ENST00000548379 ADAM29Q9UKF5 820 aa5.32□□□□□ -1.56
PTCH1-216ENST00000548379 CNOT6Q9ULM6 557 aaKnown RBP5.32□□□□□ -1.56
PTCH1-216ENST00000548379 CTDP1Q9Y5B0 961 aaPredicted RBP5.32□□□□□ -1.56
PTCH1-216ENST00000548379 LAMC3Q9Y6N6 1575 aa5.32□□□□□ -1.56
PTCH1-216ENST00000548379 SMARCA4P51532 1647 aa5.31□□□□□ -1.56
PTCH1-216ENST00000548379 TCAF2A6NFQ2 919 aa5.31□□□□□ -1.56
PTCH1-216ENST00000548379 CCDC154A6NI56 674 aa5.31□□□□□ -1.56
PTCH1-216ENST00000548379 AP1G1O43747 822 aa5.31□□□□□ -1.56
PTCH1-216ENST00000548379 CAND2O75155 1236 aa5.31□□□□□ -1.56
PTCH1-216ENST00000548379 SARSP49591 514 aaKnown RBP5.31□□□□□ -1.56
PTCH1-216ENST00000548379 GALEQ14376 348 aa5.31□□□□□ -1.56
PTCH1-216ENST00000548379 ZNF267Q14586 743 aaPredicted RBP5.31□□□□□ -1.56
PTCH1-216ENST00000548379 SEPT2Q15019 361 aa5.31□□□□□ -1.56
PTCH1-216ENST00000548379 PCOLCEQ15113 449 aa5.31□□□□□ -1.56
PTCH1-216ENST00000548379 UAP1L1Q3KQV9 507 aa5.31□□□□□ -1.56
PTCH1-216ENST00000548379 C3orf36Q3SXR2 165 aa5.31□□□□□ -1.56
PTCH1-216ENST00000548379 GJC2Q5T442 439 aaPredicted RBP5.31□□□□□ -1.56
PTCH1-216ENST00000548379 CARFQ8N187 725 aa5.31□□□□□ -1.56
PTCH1-216ENST00000548379 KLHL36Q8N4N3 616 aa5.31□□□□□ -1.56
PTCH1-216ENST00000548379 TP53I13Q8NBR0 393 aaPredicted RBP5.31□□□□□ -1.56
PTCH1-216ENST00000548379 TXNDC5Q8NBS9 432 aaKnown RBP5.31□□□□□ -1.56
PTCH1-216ENST00000548379 DIS3LQ8TF46 1054 aaKnown RBP5.31□□□□□ -1.56
PTCH1-216ENST00000548379 SNX33Q8WV41 574 aa5.31□□□□□ -1.56
PTCH1-216ENST00000548379 RIN2Q8WYP3 895 aaPredicted RBP5.31□□□□□ -1.56
PTCH1-216ENST00000548379 ARNT2Q9HBZ2 717 aa5.31□□□□□ -1.56
PTCH1-216ENST00000548379 PRDM11Q9NQV5 511 aa5.31□□□□□ -1.56
PTCH1-216ENST00000548379 PTPN22Q9Y2R2 807 aa5.31□□□□□ -1.56
PTCH1-216ENST00000548379 RPTORQ8N122 1335 aa5.3□□□□□ -1.56
PTCH1-216ENST00000548379 C2orf78A6NCI8 922 aa5.3□□□□□ -1.56
PTCH1-216ENST00000548379 GSPT1P15170 499 aaKnown RBP5.3□□□□□ -1.56
PTCH1-216ENST00000548379 LINC00310P59036 64 aa5.3□□□□□ -1.56
PTCH1-216ENST00000548379 DSC2Q02487 901 aa5.3□□□□□ -1.56
PTCH1-216ENST00000548379 GRM3Q14832 879 aa5.3□□□□□ -1.56
PTCH1-216ENST00000548379 UBE3CQ15386 1083 aa5.3□□□□□ -1.56
PTCH1-216ENST00000548379 MST1LQ2TV78 715 aa5.3□□□□□ -1.56
PTCH1-216ENST00000548379 ZNF385BQ569K4 471 aa5.3□□□□□ -1.56
PTCH1-216ENST00000548379 OGFOD2Q6N063 350 aa5.3□□□□□ -1.56
PTCH1-216ENST00000548379 ABHD15Q6UXT9 468 aa5.3□□□□□ -1.56
PTCH1-216ENST00000548379 CHST15Q7LFX5 561 aaPredicted RBP5.3□□□□□ -1.56
PTCH1-216ENST00000548379 MSL3Q8N5Y2 521 aaKnown RBP5.3□□□□□ -1.56
PTCH1-216ENST00000548379 MARCH10Q8NA82 808 aaPredicted RBP5.3□□□□□ -1.56
PTCH1-216ENST00000548379 LPPQ93052 612 aa5.3□□□□□ -1.56
PTCH1-216ENST00000548379 C1GALT1C1Q96EU7 318 aa5.3□□□□□ -1.56
PTCH1-216ENST00000548379 MVB12AQ96EY5 273 aa5.3□□□□□ -1.56
PTCH1-216ENST00000548379 LRGUKQ96M69 825 aa5.3□□□□□ -1.56
PTCH1-216ENST00000548379 FMNL2Q96PY5 1086 aa5.3□□□□□ -1.56
PTCH1-216ENST00000548379 ADI1Q9BV57 179 aa5.3□□□□□ -1.56
PTCH1-216ENST00000548379 CARD11Q9BXL7 1154 aa5.3□□□□□ -1.56
PTCH1-216ENST00000548379 TMEM168Q9H0V1 697 aa5.3□□□□□ -1.56
PTCH1-216ENST00000548379 C1orf112Q9NSG2 853 aa5.3□□□□□ -1.56
PTCH1-216ENST00000548379 DDX20Q9UHI6 824 aaKnown RBP5.3□□□□□ -1.56
PTCH1-216ENST00000548379 SAP30BPQ9UHR5 308 aaKnown RBP5.3□□□□□ -1.56
PTCH1-216ENST00000548379 MRC2Q9UBG0 1479 aa5.3□□□□□ -1.56
PTCH1-216ENST00000548379 FAM171A2A8MVW0 826 aa5.29□□□□□ -1.56
PTCH1-216ENST00000548379 H3BML4 177 aa5.29□□□□□ -1.56
PTCH1-216ENST00000548379 RFXAPO00287 272 aa5.29□□□□□ -1.56
PTCH1-216ENST00000548379 MTSS1O43312 755 aa5.29□□□□□ -1.56
PTCH1-216ENST00000548379 ZNF888P0CJ79 500 aaPredicted RBP5.29□□□□□ -1.56
PTCH1-216ENST00000548379 MRE11P49959 708 aa5.29□□□□□ -1.56
PTCH1-216ENST00000548379 WNT3AP56704 352 aa5.29□□□□□ -1.56
PTCH1-216ENST00000548379 ADAM8P78325 824 aa5.29□□□□□ -1.56
PTCH1-216ENST00000548379 HGFACQ04756 655 aa5.29□□□□□ -1.56
PTCH1-216ENST00000548379 AGBL4Q5VU57 503 aa5.29□□□□□ -1.56
PTCH1-216ENST00000548379 Q6ZVL8 140 aa5.29□□□□□ -1.56
PTCH1-216ENST00000548379 CCDC146Q8IYE0 955 aa5.29□□□□□ -1.56
PTCH1-216ENST00000548379 ADGRG2Q8IZP9 1017 aa5.29□□□□□ -1.56
PTCH1-216ENST00000548379 LILRA3Q8N6C8 439 aaPredicted RBP5.29□□□□□ -1.56
PTCH1-216ENST00000548379 LINC01356Q8N9X3 169 aa5.29□□□□□ -1.56
PTCH1-216ENST00000548379 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.29□□□□□ -1.56
PTCH1-216ENST00000548379 ADAMTS17Q8TE56 1095 aa5.29□□□□□ -1.56
PTCH1-216ENST00000548379 DPF2Q92785 391 aa5.29□□□□□ -1.56
PTCH1-216ENST00000548379 HDAC10Q969S8 669 aa5.29□□□□□ -1.56
PTCH1-216ENST00000548379 FAM193BQ96PV7 902 aaPredicted RBP5.29□□□□□ -1.56
PTCH1-216ENST00000548379 MAP3K14Q99558 947 aa5.29□□□□□ -1.56
PTCH1-216ENST00000548379 ACO2Q99798 780 aaKnown RBP5.29□□□□□ -1.56
PTCH1-216ENST00000548379 OR10A2Q9H208 303 aa5.29□□□□□ -1.56
PTCH1-216ENST00000548379 DDX21Q9NR30 783 aaKnown RBP eCLIP5.29□□□□□ -1.56
PTCH1-216ENST00000548379 RCAN3Q9UKA8 241 aa5.29□□□□□ -1.56
PTCH1-216ENST00000548379 INTUQ9ULD6 942 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms