RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 BUB1O43683 1085 aa14.9□□□□□ -0.02
HCFC2-202ENST00000544223 HNRNPH3P31942 346 aaKnown RBP14.9□□□□□ -0.02
HCFC2-202ENST00000544223 CYLC1P35663 651 aaPredicted RBP14.9□□□□□ -0.02
HCFC2-202ENST00000544223 MATR3P43243 847 aaKnown RBP eCLIP14.9□□□□□ -0.02
HCFC2-202ENST00000544223 CCNA1P78396 465 aa14.9□□□□□ -0.02
HCFC2-202ENST00000544223 ARHGAP1Q07960 439 aa14.9□□□□□ -0.02
HCFC2-202ENST00000544223 KLHL30Q0D2K2 578 aa14.9□□□□□ -0.02
HCFC2-202ENST00000544223 TTLL4Q14679 1199 aa14.9□□□□□ -0.02
HCFC2-202ENST00000544223 ZNF571Q7Z3V5 609 aaPredicted RBP14.9□□□□□ -0.02
HCFC2-202ENST00000544223 IRF2BP2Q7Z5L9 587 aa14.9□□□□□ -0.02
HCFC2-202ENST00000544223 ZBTB33Q86T24 672 aa14.9□□□□□ -0.02
HCFC2-202ENST00000544223 RASAL3Q86YV0 1011 aa14.9□□□□□ -0.02
HCFC2-202ENST00000544223 RHPN2Q8IUC4 686 aa14.9□□□□□ -0.02
HCFC2-202ENST00000544223 SEMA4DQ92854 862 aa14.9□□□□□ -0.02
HCFC2-202ENST00000544223 NTPCRQ9BSD7 190 aaKnown RBP14.9□□□□□ -0.02
HCFC2-202ENST00000544223 INTS2Q9H0H0 1204 aaKnown RBP14.9□□□□□ -0.02
HCFC2-202ENST00000544223 ARHGAP28Q9P2N2 729 aa14.9□□□□□ -0.02
HCFC2-202ENST00000544223 PHLPP2Q6ZVD8 1323 aa14.89□□□□□ -0.03
HCFC2-202ENST00000544223 NLRP11P59045 1033 aaKnown RBP14.89□□□□□ -0.03
HCFC2-202ENST00000544223 NLRP4Q96MN2 994 aa14.89□□□□□ -0.03
HCFC2-202ENST00000544223 PSMB7Q99436 277 aa14.89□□□□□ -0.03
HCFC2-202ENST00000544223 NIFKQ9BYG3 293 aaKnown RBP14.89□□□□□ -0.03
HCFC2-202ENST00000544223 LAMA3Q16787 3333 aa14.89□□□□□ -0.03
HCFC2-202ENST00000544223 TMCO5BA8MYB1 307 aa14.89□□□□□ -0.03
HCFC2-202ENST00000544223 EIF3CLB5ME19 914 aaKnown RBP14.89□□□□□ -0.03
HCFC2-202ENST00000544223 MOCS3O95396 460 aa14.89□□□□□ -0.03
HCFC2-202ENST00000544223 KRT13P13646 458 aa14.89□□□□□ -0.03
HCFC2-202ENST00000544223 ARL2P36404 184 aa14.89□□□□□ -0.03
HCFC2-202ENST00000544223 ASTE1Q2TB18 679 aaPredicted RBP14.89□□□□□ -0.03
HCFC2-202ENST00000544223 FAM160B1Q5W0V3 765 aa14.89□□□□□ -0.03
HCFC2-202ENST00000544223 SAPCD2Q86UD0 394 aa14.89□□□□□ -0.03
HCFC2-202ENST00000544223 SLC9A9Q8IVB4 645 aa14.89□□□□□ -0.03
HCFC2-202ENST00000544223 LMO3Q8TAP4 145 aa14.89□□□□□ -0.03
HCFC2-202ENST00000544223 DEPTORQ8TB45 409 aa14.89□□□□□ -0.03
HCFC2-202ENST00000544223 MAML3Q96JK9 1138 aa14.89□□□□□ -0.03
HCFC2-202ENST00000544223 EIF3CQ99613 913 aaKnown RBP14.89□□□□□ -0.03
HCFC2-202ENST00000544223 TMEM117Q9H0C3 514 aa14.89□□□□□ -0.03
HCFC2-202ENST00000544223 NRBP2Q9NSY0 501 aa14.89□□□□□ -0.03
HCFC2-202ENST00000544223 DNAJC12Q9UKB3 198 aa14.89□□□□□ -0.03
HCFC2-202ENST00000544223 CAPN6Q9Y6Q1 641 aa14.89□□□□□ -0.03
HCFC2-202ENST00000544223 PTPRJQ12913 1337 aa14.88□□□□□ -0.03
HCFC2-202ENST00000544223 LRRIQ3A6PVS8 624 aaPredicted RBP14.88□□□□□ -0.03
HCFC2-202ENST00000544223 K7ERI5 159 aa14.88□□□□□ -0.03
HCFC2-202ENST00000544223 DKC1O60832 514 aaKnown RBP eCLIP14.88□□□□□ -0.03
HCFC2-202ENST00000544223 SMPD1P17405 629 aa14.88□□□□□ -0.03
HCFC2-202ENST00000544223 CYP2C19P33261 490 aa14.88□□□□□ -0.03
HCFC2-202ENST00000544223 LIG4P49917 911 aa14.88□□□□□ -0.03
HCFC2-202ENST00000544223 DNA2P51530 1060 aa14.88□□□□□ -0.03
HCFC2-202ENST00000544223 NCBP1Q09161 790 aaKnown RBP14.88□□□□□ -0.03
HCFC2-202ENST00000544223 TAF1CQ15572 869 aaPredicted RBP14.88□□□□□ -0.03
HCFC2-202ENST00000544223 ASIC2Q16515 512 aa14.88□□□□□ -0.03
HCFC2-202ENST00000544223 ERCC6LQ2NKX8 1250 aa14.88□□□□□ -0.03
HCFC2-202ENST00000544223 RNF149Q8NC42 400 aa14.88□□□□□ -0.03
HCFC2-202ENST00000544223 SHCBP1Q8NEM2 672 aa14.88□□□□□ -0.03
HCFC2-202ENST00000544223 SCFD2Q8WU76 684 aa14.88□□□□□ -0.03
HCFC2-202ENST00000544223 SPIRE2Q8WWL2 714 aa14.88□□□□□ -0.03
HCFC2-202ENST00000544223 PARK7Q99497 189 aaKnown RBP14.88□□□□□ -0.03
HCFC2-202ENST00000544223 GPR88Q9GZN0 384 aa14.88□□□□□ -0.03
HCFC2-202ENST00000544223 KATNBL1Q9H079 304 aa14.88□□□□□ -0.03
HCFC2-202ENST00000544223 ST6GALNAC4Q9H4F1 302 aa14.88□□□□□ -0.03
HCFC2-202ENST00000544223 PUF60Q9UHX1 559 aaKnown RBP14.88□□□□□ -0.03
HCFC2-202ENST00000544223 ZBTB48P10074 688 aaPredicted RBP14.88□□□□□ -0.03
HCFC2-202ENST00000544223 FKBP1BP68106 108 aa14.88□□□□□ -0.03
HCFC2-202ENST00000544223 DRAP1Q14919 205 aaPredicted RBP14.88□□□□□ -0.03
HCFC2-202ENST00000544223 SPA17Q15506 151 aa14.88□□□□□ -0.03
HCFC2-202ENST00000544223 ELF2Q15723 593 aa14.88□□□□□ -0.03
HCFC2-202ENST00000544223 NFIL3Q16649 462 aa14.88□□□□□ -0.03
HCFC2-202ENST00000544223 SLC9C1Q4G0N8 1177 aa14.88□□□□□ -0.03
HCFC2-202ENST00000544223 CHADLQ6NUI6 762 aa14.88□□□□□ -0.03
HCFC2-202ENST00000544223 GOLGA5Q8TBA6 731 aa14.88□□□□□ -0.03
HCFC2-202ENST00000544223 MKNK1Q9BUB5 465 aa14.88□□□□□ -0.03
HCFC2-202ENST00000544223 TIPINQ9BVW5 301 aa14.88□□□□□ -0.03
HCFC2-202ENST00000544223 GOLPH3Q9H4A6 298 aa14.88□□□□□ -0.03
HCFC2-202ENST00000544223 UBE2TQ9NPD8 197 aaPredicted RBP14.88□□□□□ -0.03
HCFC2-202ENST00000544223 ASB14A6NK59 587 aa14.87□□□□□ -0.03
HCFC2-202ENST00000544223 KIF2AO00139 706 aaPredicted RBP14.87□□□□□ -0.03
HCFC2-202ENST00000544223 B4GALT5O43286 388 aa14.87□□□□□ -0.03
HCFC2-202ENST00000544223 ATP1A1P05023 1023 aaKnown RBP14.87□□□□□ -0.03
HCFC2-202ENST00000544223 USP8P40818 1118 aa14.87□□□□□ -0.03
HCFC2-202ENST00000544223 TNFSF9P41273 254 aa14.87□□□□□ -0.03
HCFC2-202ENST00000544223 OSTNP61366 133 aa14.87□□□□□ -0.03
HCFC2-202ENST00000544223 LAMTOR4Q0VGL1 99 aa14.87□□□□□ -0.03
HCFC2-202ENST00000544223 KCTD19Q17RG1 926 aaPredicted RBP14.87□□□□□ -0.03
HCFC2-202ENST00000544223 PAXIP1Q6ZW49 1069 aaPredicted RBP14.87□□□□□ -0.03
HCFC2-202ENST00000544223 CCDC170Q8IYT3 715 aa14.87□□□□□ -0.03
HCFC2-202ENST00000544223 AFAP1L1Q8TED9 768 aa14.87□□□□□ -0.03
HCFC2-202ENST00000544223 MPHOSPH6Q99547 160 aaKnown RBP14.87□□□□□ -0.03
HCFC2-202ENST00000544223 MINDY3Q9H8M7 445 aa14.87□□□□□ -0.03
HCFC2-202ENST00000544223 PDE11AQ9HCR9 933 aa14.87□□□□□ -0.03
HCFC2-202ENST00000544223 MORF4L1Q9UBU8 362 aa14.87□□□□□ -0.03
HCFC2-202ENST00000544223 GOLGA6L9A6NEM1 432 aa14.87□□□□□ -0.03
HCFC2-202ENST00000544223 FOXN3O00409 490 aaPredicted RBP14.87□□□□□ -0.03
HCFC2-202ENST00000544223 MAFO75444 373 aaPredicted RBP14.87□□□□□ -0.03
HCFC2-202ENST00000544223 IPO7O95373 1038 aaKnown RBP14.87□□□□□ -0.03
HCFC2-202ENST00000544223 SERPING1P05155 500 aa14.87□□□□□ -0.03
HCFC2-202ENST00000544223 IQCF3P0C7M6 154 aa14.87□□□□□ -0.03
HCFC2-202ENST00000544223 CYP2B6P20813 491 aa14.87□□□□□ -0.03
HCFC2-202ENST00000544223 GTF2F1P35269 517 aaKnown RBP eCLIP14.87□□□□□ -0.03
HCFC2-202ENST00000544223 MAGEA1P43355 309 aa14.87□□□□□ -0.03
HCFC2-202ENST00000544223 GRB14Q14449 540 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms