RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 CEP63Q96MT8 703 aa11.7□□□□□ -0.54
DDB1-221ENST00000543162 MRPL4Q9BYD3 311 aaKnown RBP11.7□□□□□ -0.54
DDB1-221ENST00000543162 SEZ6LQ9BYH1 1024 aa11.7□□□□□ -0.54
DDB1-221ENST00000543162 GCOM2Q9BZD3 368 aaPredicted RBP11.7□□□□□ -0.54
DDB1-221ENST00000543162 INO80BQ9C086 356 aaPredicted RBP11.7□□□□□ -0.54
DDB1-221ENST00000543162 CCDC113Q9H0I3 377 aa11.7□□□□□ -0.54
DDB1-221ENST00000543162 ADAMTS10Q9H324 1103 aa11.7□□□□□ -0.54
DDB1-221ENST00000543162 IFT122Q9HBG6 1241 aa11.7□□□□□ -0.54
DDB1-221ENST00000543162 GINS2Q9Y248 185 aa11.7□□□□□ -0.54
DDB1-221ENST00000543162 SIP14410 1827 aa11.7□□□□□ -0.54
DDB1-221ENST00000543162 KCNJ18B7U540 433 aa11.69□□□□□ -0.54
DDB1-221ENST00000543162 M0QZ92 97 aa11.69□□□□□ -0.54
DDB1-221ENST00000543162 ARVCFO00192 962 aa11.69□□□□□ -0.54
DDB1-221ENST00000543162 GPR32O75388 356 aa11.69□□□□□ -0.54
DDB1-221ENST00000543162 PIGRP01833 764 aa11.69□□□□□ -0.54
DDB1-221ENST00000543162 ATP1A3P13637 1013 aa11.69□□□□□ -0.54
DDB1-221ENST00000543162 GJA8P48165 433 aa11.69□□□□□ -0.54
DDB1-221ENST00000543162 CYP2J2P51589 502 aa11.69□□□□□ -0.54
DDB1-221ENST00000543162 MBTD1Q05BQ5 628 aa11.69□□□□□ -0.54
DDB1-221ENST00000543162 PTK7Q13308 1070 aa11.69□□□□□ -0.54
DDB1-221ENST00000543162 MYBPC2Q14324 1141 aa11.69□□□□□ -0.54
DDB1-221ENST00000543162 KCNJ12Q14500 433 aa11.69□□□□□ -0.54
DDB1-221ENST00000543162 NFIL3Q16649 462 aa11.69□□□□□ -0.54
DDB1-221ENST00000543162 TMEM132AQ24JP5 1023 aa11.69□□□□□ -0.54
DDB1-221ENST00000543162 ARMCX5Q6P1M9 558 aa11.69□□□□□ -0.54
DDB1-221ENST00000543162 ZPBP2Q6X784 338 aa11.69□□□□□ -0.54
DDB1-221ENST00000543162 SRGAP1Q7Z6B7 1085 aa11.69□□□□□ -0.54
DDB1-221ENST00000543162 CREBRFQ8IUR6 639 aa11.69□□□□□ -0.54
DDB1-221ENST00000543162 C12orf56Q8IXR9 622 aa11.69□□□□□ -0.54
DDB1-221ENST00000543162 ZC3H3Q8IXZ2 948 aaKnown RBP11.69□□□□□ -0.54
DDB1-221ENST00000543162 TMEM106CQ9BVX2 250 aa11.69□□□□□ -0.54
DDB1-221ENST00000543162 FZD8Q9H461 694 aa11.69□□□□□ -0.54
DDB1-221ENST00000543162 MINDY3Q9H8M7 445 aa11.69□□□□□ -0.54
DDB1-221ENST00000543162 TRMT13Q9NUP7 481 aaKnown RBP11.69□□□□□ -0.54
DDB1-221ENST00000543162 PRMT7Q9NVM4 692 aaPredicted RBP11.69□□□□□ -0.54
DDB1-221ENST00000543162 TISP43B9A030 160 aa11.68□□□□□ -0.54
DDB1-221ENST00000543162 ANKRD63C9JTQ0 380 aa11.68□□□□□ -0.54
DDB1-221ENST00000543162 ACKR2O00590 384 aa11.68□□□□□ -0.54
DDB1-221ENST00000543162 ERLIN2O94905 339 aa11.68□□□□□ -0.54
DDB1-221ENST00000543162 GNA14O95837 355 aa11.68□□□□□ -0.54
DDB1-221ENST00000543162 SERPINC1P01008 464 aa11.68□□□□□ -0.54
DDB1-221ENST00000543162 EEF1GP26641 437 aaKnown RBP11.68□□□□□ -0.54
DDB1-221ENST00000543162 CRYBB1P53674 252 aaPredicted RBP11.68□□□□□ -0.54
DDB1-221ENST00000543162 MRPS6P82932 125 aaKnown RBP11.68□□□□□ -0.54
DDB1-221ENST00000543162 FANCCQ00597 558 aa11.68□□□□□ -0.54
DDB1-221ENST00000543162 PRPF4BQ13523 1007 aaKnown RBP11.68□□□□□ -0.54
DDB1-221ENST00000543162 FAM187BQ17R55 369 aa11.68□□□□□ -0.54
DDB1-221ENST00000543162 CCDC40Q4G0X9 1142 aa11.68□□□□□ -0.54
DDB1-221ENST00000543162 TCP11X2Q5H9J9 407 aa11.68□□□□□ -0.54
DDB1-221ENST00000543162 CEP135Q66GS9 1140 aa11.68□□□□□ -0.54
DDB1-221ENST00000543162 SLFN12LQ6IEE8 588 aa11.68□□□□□ -0.54
DDB1-221ENST00000543162 SARM1Q6SZW1 724 aa11.68□□□□□ -0.54
DDB1-221ENST00000543162 FILIP1Q7Z7B0 1213 aa11.68□□□□□ -0.54
DDB1-221ENST00000543162 RPAINQ86UA6 219 aa11.68□□□□□ -0.54
DDB1-221ENST00000543162 IRF2BP1Q8IU81 584 aa11.68□□□□□ -0.54
DDB1-221ENST00000543162 SLC9A9Q8IVB4 645 aa11.68□□□□□ -0.54
DDB1-221ENST00000543162 POMGNT1Q8WZA1 660 aa11.68□□□□□ -0.54
DDB1-221ENST00000543162 ANP32BQ92688 251 aaKnown RBP11.68□□□□□ -0.54
DDB1-221ENST00000543162 CNOT6LQ96LI5 555 aaKnown RBP11.68□□□□□ -0.54
DDB1-221ENST00000543162 CTAGE1Q96RT6 745 aa11.68□□□□□ -0.54
DDB1-221ENST00000543162 OSMRQ99650 979 aa11.68□□□□□ -0.54
DDB1-221ENST00000543162 CBWD1Q9BRT8 395 aa11.68□□□□□ -0.54
DDB1-221ENST00000543162 TARS2Q9BW92 718 aaKnown RBP11.68□□□□□ -0.54
DDB1-221ENST00000543162 CELF4Q9BZC1 486 aaKnown RBP11.68□□□□□ -0.54
DDB1-221ENST00000543162 SENP6Q9GZR1 1112 aaPredicted RBP11.68□□□□□ -0.54
DDB1-221ENST00000543162 MCOLN1Q9GZU1 580 aa11.68□□□□□ -0.54
DDB1-221ENST00000543162 TRPV6Q9H1D0 765 aa11.68□□□□□ -0.54
DDB1-221ENST00000543162 DMAC2Q9NW81 257 aa11.68□□□□□ -0.54
DDB1-221ENST00000543162 USP20Q9Y2K6 914 aa11.68□□□□□ -0.54
DDB1-221ENST00000543162 SLC16A3O15427 465 aaKnown RBP11.67□□□□□ -0.54
DDB1-221ENST00000543162 B4GALT4O60513 344 aa11.67□□□□□ -0.54
DDB1-221ENST00000543162 EXOC3O60645 756 aa11.67□□□□□ -0.54
DDB1-221ENST00000543162 CSDE1O75534 798 aaKnown RBP11.67□□□□□ -0.54
DDB1-221ENST00000543162 TPM2P07951 284 aa11.67□□□□□ -0.54
DDB1-221ENST00000543162 IQCF3P0C7M6 154 aa11.67□□□□□ -0.54
DDB1-221ENST00000543162 EPB41P11171 864 aaKnown RBP11.67□□□□□ -0.54
DDB1-221ENST00000543162 DARSP14868 501 aaKnown RBP11.67□□□□□ -0.54
DDB1-221ENST00000543162 CAPN2P17655 700 aa11.67□□□□□ -0.54
DDB1-221ENST00000543162 GARTP22102 1010 aa11.67□□□□□ -0.54
DDB1-221ENST00000543162 EIF4BP23588 611 aaKnown RBP11.67□□□□□ -0.54
DDB1-221ENST00000543162 THPOP40225 353 aa11.67□□□□□ -0.54
DDB1-221ENST00000543162 MATR3P43243 847 aaKnown RBP eCLIP11.67□□□□□ -0.54
DDB1-221ENST00000543162 MTIF2P46199 727 aaKnown RBP11.67□□□□□ -0.54
DDB1-221ENST00000543162 CDK7P50613 346 aa11.67□□□□□ -0.54
DDB1-221ENST00000543162 SLC39A4Q6P5W5 647 aa11.67□□□□□ -0.54
DDB1-221ENST00000543162 ANKLE1Q8NAG6 615 aa11.67□□□□□ -0.54
DDB1-221ENST00000543162 XXYLT1Q8NBI6 393 aa11.67□□□□□ -0.54
DDB1-221ENST00000543162 TMEM174Q8WUU8 243 aa11.67□□□□□ -0.54
DDB1-221ENST00000543162 WNT8BQ93098 351 aa11.67□□□□□ -0.54
DDB1-221ENST00000543162 PRIMPOLQ96LW4 560 aa11.67□□□□□ -0.54
DDB1-221ENST00000543162 ACO2Q99798 780 aaKnown RBP11.67□□□□□ -0.54
DDB1-221ENST00000543162 TCHPQ9BT92 498 aa11.67□□□□□ -0.54
DDB1-221ENST00000543162 TRIM5Q9C035 493 aa11.67□□□□□ -0.54
DDB1-221ENST00000543162 PCIF1Q9H4Z3 704 aa11.67□□□□□ -0.54
DDB1-221ENST00000543162 CDHR5Q9HBB8 845 aa11.67□□□□□ -0.54
DDB1-221ENST00000543162 HSPBP1Q9NZL4 362 aa11.67□□□□□ -0.54
DDB1-221ENST00000543162 ANKFY1Q9P2R3 1169 aa11.67□□□□□ -0.54
DDB1-221ENST00000543162 LIMA1Q9UHB6 759 aaKnown RBP11.67□□□□□ -0.54
DDB1-221ENST00000543162 FRMD4BQ9Y2L6 1034 aa11.67□□□□□ -0.54
DDB1-221ENST00000543162 TRPV2Q9Y5S1 764 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms