RNA–Protein interactions for RNA: ENST00000542397.5

C12orf56-205, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 1 (best)

Gene C12orf56, Length 935 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-205ENST00000542397 GLIS2Q9BZE0 524 aaPredicted RBP6.06□□□□□ -1.44
C12orf56-205ENST00000542397 XYLT2Q9H1B5 865 aa6.06□□□□□ -1.44
C12orf56-205ENST00000542397 MIS18AQ9NYP9 233 aa6.06□□□□□ -1.44
C12orf56-205ENST00000542397 DBR1Q9UK59 544 aaKnown RBP6.06□□□□□ -1.44
C12orf56-205ENST00000542397 ZBTB1Q9Y2K1 713 aa6.06□□□□□ -1.44
C12orf56-205ENST00000542397 BACE2Q9Y5Z0 518 aa6.06□□□□□ -1.44
C12orf56-205ENST00000542397 SCN7AQ01118 1682 aa6.06□□□□□ -1.44
C12orf56-205ENST00000542397 COL15A1P39059 1388 aa6.06□□□□□ -1.44
C12orf56-205ENST00000542397 ZC3H12DA2A288 527 aaKnown RBP6.05□□□□□ -1.44
C12orf56-205ENST00000542397 C2orf71A6NGG8 1288 aa6.05□□□□□ -1.44
C12orf56-205ENST00000542397 GPR39O43194 453 aa6.05□□□□□ -1.44
C12orf56-205ENST00000542397 OPA1O60313 960 aa6.05□□□□□ -1.44
C12orf56-205ENST00000542397 ZEB2O60315 1214 aa6.05□□□□□ -1.44
C12orf56-205ENST00000542397 ALDH1L1O75891 902 aa6.05□□□□□ -1.44
C12orf56-205ENST00000542397 SNRPB2P08579 225 aaKnown RBP6.05□□□□□ -1.44
C12orf56-205ENST00000542397 GLI4P10075 376 aa6.05□□□□□ -1.44
C12orf56-205ENST00000542397 BPIP17213 487 aa6.05□□□□□ -1.44
C12orf56-205ENST00000542397 IL6STP40189 918 aaPredicted RBP6.05□□□□□ -1.44
C12orf56-205ENST00000542397 EPS15P42566 896 aa6.05□□□□□ -1.44
C12orf56-205ENST00000542397 LIMS1P48059 325 aa6.05□□□□□ -1.44
C12orf56-205ENST00000542397 PRR5P85299 388 aa6.05□□□□□ -1.44
C12orf56-205ENST00000542397 CAP1Q01518 475 aa6.05□□□□□ -1.44
C12orf56-205ENST00000542397 SF1Q15637 639 aaKnown RBP6.05□□□□□ -1.44
C12orf56-205ENST00000542397 CTU1Q7Z7A3 348 aaKnown RBP6.05□□□□□ -1.44
C12orf56-205ENST00000542397 SAPCD2Q86UD0 394 aa6.05□□□□□ -1.44
C12orf56-205ENST00000542397 FMNL3Q8IVF7 1028 aa6.05□□□□□ -1.44
C12orf56-205ENST00000542397 SP8Q8IXZ3 490 aa6.05□□□□□ -1.44
C12orf56-205ENST00000542397 ASPSCR1Q9BZE9 553 aa6.05□□□□□ -1.44
C12orf56-205ENST00000542397 RTEL1Q9NZ71 1219 aa6.05□□□□□ -1.44
C12orf56-205ENST00000542397 USP16Q9Y5T5 823 aa6.05□□□□□ -1.44
C12orf56-205ENST00000542397 A0A0C4DFX4 3053 aa6.05□□□□□ -1.44
C12orf56-205ENST00000542397 COL6A3P12111 3177 aa6.05□□□□□ -1.44
C12orf56-205ENST00000542397 CEP290O15078 2479 aa6.04□□□□□ -1.44
C12orf56-205ENST00000542397 PRAMEF22A3QJZ6 481 aa6.04□□□□□ -1.44
C12orf56-205ENST00000542397 OTOL1A6NHN0 477 aaPredicted RBP6.04□□□□□ -1.44
C12orf56-205ENST00000542397 A1BGP04217 495 aa6.04□□□□□ -1.44
C12orf56-205ENST00000542397 GUCY2FP51841 1108 aa6.04□□□□□ -1.44
C12orf56-205ENST00000542397 ZNF460Q14592 562 aa6.04□□□□□ -1.44
C12orf56-205ENST00000542397 TTF1Q15361 905 aaPredicted RBP6.04□□□□□ -1.44
C12orf56-205ENST00000542397 PCBP1Q15365 356 aaKnown RBP eCLIP6.04□□□□□ -1.44
C12orf56-205ENST00000542397 SEPT7Q16181 437 aaKnown RBP6.04□□□□□ -1.44
C12orf56-205ENST00000542397 E4F1Q66K89 784 aaPredicted RBP6.04□□□□□ -1.44
C12orf56-205ENST00000542397 DENND5AQ6IQ26 1287 aa6.04□□□□□ -1.44
C12orf56-205ENST00000542397 CABP7Q86V35 215 aa6.04□□□□□ -1.44
C12orf56-205ENST00000542397 PNMA8AQ86V59 439 aaPredicted RBP6.04□□□□□ -1.44
C12orf56-205ENST00000542397 LZTR1Q8N653 840 aa6.04□□□□□ -1.44
C12orf56-205ENST00000542397 NPLOC4Q8TAT6 608 aa6.04□□□□□ -1.44
C12orf56-205ENST00000542397 WDR66Q8TBY9 1149 aa6.04□□□□□ -1.44
C12orf56-205ENST00000542397 LEO1Q8WVC0 666 aaPredicted RBP6.04□□□□□ -1.44
C12orf56-205ENST00000542397 RNF38Q9H0F5 515 aa6.04□□□□□ -1.44
C12orf56-205ENST00000542397 PUS7LQ9H0K6 701 aaKnown RBP6.04□□□□□ -1.44
C12orf56-205ENST00000542397 LUC7LQ9NQ29 371 aaKnown RBP6.04□□□□□ -1.44
C12orf56-205ENST00000542397 NARFQ9UHQ1 456 aa6.04□□□□□ -1.44
C12orf56-205ENST00000542397 TCEAL9Q9UHQ7 104 aa6.04□□□□□ -1.44
C12orf56-205ENST00000542397 PLA2G2DQ9UNK4 145 aa6.04□□□□□ -1.44
C12orf56-205ENST00000542397 CCDC194A0A1B0GVG4 234 aa6.03□□□□□ -1.44
C12orf56-205ENST00000542397 ARVCFO00192 962 aa6.03□□□□□ -1.44
C12orf56-205ENST00000542397 FOXD2O60548 495 aaPredicted RBP6.03□□□□□ -1.44
C12orf56-205ENST00000542397 JMJD7P0C870 316 aa6.03□□□□□ -1.44
C12orf56-205ENST00000542397 ATF2P15336 505 aa6.03□□□□□ -1.44
C12orf56-205ENST00000542397 PAMP19021 973 aa6.03□□□□□ -1.44
C12orf56-205ENST00000542397 KIF23Q02241 960 aaPredicted RBP6.03□□□□□ -1.44
C12orf56-205ENST00000542397 MCL1Q07820 350 aa6.03□□□□□ -1.44
C12orf56-205ENST00000542397 STAT4Q14765 748 aa6.03□□□□□ -1.44
C12orf56-205ENST00000542397 KRT24Q2M2I5 525 aa6.03□□□□□ -1.44
C12orf56-205ENST00000542397 CDCA2Q69YH5 1023 aaPredicted RBP6.03□□□□□ -1.44
C12orf56-205ENST00000542397 ZCCHC8Q6NZY4 707 aaKnown RBP6.03□□□□□ -1.44
C12orf56-205ENST00000542397 UBE2R2Q712K3 238 aaPredicted RBP6.03□□□□□ -1.44
C12orf56-205ENST00000542397 SPATS2Q86XZ4 545 aaKnown RBP6.03□□□□□ -1.44
C12orf56-205ENST00000542397 CPNE8Q86YQ8 564 aa6.03□□□□□ -1.44
C12orf56-205ENST00000542397 TP53I13Q8NBR0 393 aaPredicted RBP6.03□□□□□ -1.44
C12orf56-205ENST00000542397 FEZF2Q8TBJ5 459 aa6.03□□□□□ -1.44
C12orf56-205ENST00000542397 GPR27Q9NS67 375 aa6.03□□□□□ -1.44
C12orf56-205ENST00000542397 RNF186Q9NXI6 227 aa6.03□□□□□ -1.44
C12orf56-205ENST00000542397 APOBEC2Q9Y235 224 aaKnown RBP6.03□□□□□ -1.44
C12orf56-205ENST00000542397 RWDD3Q9Y3V2 267 aa6.03□□□□□ -1.44
C12orf56-205ENST00000542397 LAS1LQ9Y4W2 734 aaKnown RBP6.03□□□□□ -1.44
C12orf56-205ENST00000542397 FANCIQ9NVI1 1328 aa6.02□□□□□ -1.45
C12orf56-205ENST00000542397 NUP98P52948 1817 aa6.02□□□□□ -1.45
C12orf56-205ENST00000542397 TRBV23OR9-2A0A075B6M9 112 aa6.02□□□□□ -1.45
C12orf56-205ENST00000542397 NPHP3-ACAD11A0A0J9YXS1 232 aa6.02□□□□□ -1.45
C12orf56-205ENST00000542397 BLACEA4D250 179 aa6.02□□□□□ -1.45
C12orf56-205ENST00000542397 FFAR3O14843 346 aa6.02□□□□□ -1.45
C12orf56-205ENST00000542397 WNT9AO14904 365 aa6.02□□□□□ -1.45
C12orf56-205ENST00000542397 PPP1R11O60927 126 aaPredicted RBP6.02□□□□□ -1.45
C12orf56-205ENST00000542397 CAMTA2O94983 1202 aa6.02□□□□□ -1.45
C12orf56-205ENST00000542397 CRTAMO95727 393 aa6.02□□□□□ -1.45
C12orf56-205ENST00000542397 APPP05067 770 aa6.02□□□□□ -1.45
C12orf56-205ENST00000542397 NCAM1P13591 858 aa6.02□□□□□ -1.45
C12orf56-205ENST00000542397 KCNJ6P48051 423 aa6.02□□□□□ -1.45
C12orf56-205ENST00000542397 NEK4P51957 841 aa6.02□□□□□ -1.45
C12orf56-205ENST00000542397 HUNKP57058 714 aa6.02□□□□□ -1.45
C12orf56-205ENST00000542397 GPR85P60893 370 aa6.02□□□□□ -1.45
C12orf56-205ENST00000542397 FOXO4P98177 505 aa6.02□□□□□ -1.45
C12orf56-205ENST00000542397 SCRN1Q12765 414 aa6.02□□□□□ -1.45
C12orf56-205ENST00000542397 STRN3Q13033 797 aa6.02□□□□□ -1.45
C12orf56-205ENST00000542397 CFAP100Q494V2 611 aa6.02□□□□□ -1.45
C12orf56-205ENST00000542397 TBC1D9BQ66K14 1250 aa6.02□□□□□ -1.45
C12orf56-205ENST00000542397 PRR5LQ6MZQ0 368 aa6.02□□□□□ -1.45
C12orf56-205ENST00000542397 CLEC4GQ6UXB4 293 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms