RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 TEKT1Q969V4 418 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 CDCA5Q96FF9 252 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 GPATCH3Q96I76 525 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 WNK4Q96J92 1243 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 CAPNS2Q96L46 248 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 TARS2Q9BW92 718 aaKnown RBP6.51□□□□□ -1.37
CPSF7-220ENST00000541963 TMOD2Q9NZR1 351 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 MCM8Q9UJA3 840 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 A0A1B0GUL6 1792 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 A0A087X0B3 334 aa6.5□□□□□ -1.37
CPSF7-220ENST00000541963 PNMA6EA0A0J9YXQ4 647 aa6.5□□□□□ -1.37
CPSF7-220ENST00000541963 A0A1B0GUL7 405 aa6.5□□□□□ -1.37
CPSF7-220ENST00000541963 C7orf72A4D263 438 aa6.5□□□□□ -1.37
CPSF7-220ENST00000541963 UQCRFS1P1P0C7P4 283 aa6.5□□□□□ -1.37
CPSF7-220ENST00000541963 JMJD7P0C870 316 aa6.5□□□□□ -1.37
CPSF7-220ENST00000541963 SRGAP2CP0DJJ0 459 aa6.5□□□□□ -1.37
CPSF7-220ENST00000541963 LCP1P13796 627 aa6.5□□□□□ -1.37
CPSF7-220ENST00000541963 GRM1Q13255 1194 aa6.5□□□□□ -1.37
CPSF7-220ENST00000541963 SART3Q15020 963 aaKnown RBP6.5□□□□□ -1.37
CPSF7-220ENST00000541963 INF2Q27J81 1249 aa6.5□□□□□ -1.37
CPSF7-220ENST00000541963 CCDC158Q5M9N0 1113 aa6.5□□□□□ -1.37
CPSF7-220ENST00000541963 CYP4F22Q6NT55 531 aa6.5□□□□□ -1.37
CPSF7-220ENST00000541963 RGMBQ6NW40 437 aa6.5□□□□□ -1.37
CPSF7-220ENST00000541963 HHIPL2Q6UWX4 724 aa6.5□□□□□ -1.37
CPSF7-220ENST00000541963 CEP128Q6ZU80 1094 aa6.5□□□□□ -1.37
CPSF7-220ENST00000541963 CCDC103Q8IW40 242 aa6.5□□□□□ -1.37
CPSF7-220ENST00000541963 SCLYQ96I15 445 aa6.5□□□□□ -1.37
CPSF7-220ENST00000541963 ZBED3Q96IU2 234 aaPredicted RBP6.5□□□□□ -1.37
CPSF7-220ENST00000541963 PRMT6Q96LA8 375 aaPredicted RBP6.5□□□□□ -1.37
CPSF7-220ENST00000541963 DEFB129Q9H1M3 183 aa6.5□□□□□ -1.37
CPSF7-220ENST00000541963 ADAMTS10Q9H324 1103 aa6.5□□□□□ -1.37
CPSF7-220ENST00000541963 VEZTQ9HBM0 779 aa6.5□□□□□ -1.37
CPSF7-220ENST00000541963 GPR108Q9NPR9 543 aa6.5□□□□□ -1.37
CPSF7-220ENST00000541963 CCDC39Q9UFE4 941 aa6.5□□□□□ -1.37
CPSF7-220ENST00000541963 TMEM59LQ9UK28 342 aa6.5□□□□□ -1.37
CPSF7-220ENST00000541963 COA3Q9Y2R0 106 aaPredicted RBP6.5□□□□□ -1.37
CPSF7-220ENST00000541963 ZNF281Q9Y2X9 895 aa6.5□□□□□ -1.37
CPSF7-220ENST00000541963 TAF6LQ9Y6J9 622 aa6.5□□□□□ -1.37
CPSF7-220ENST00000541963 ASTN2O75129 1339 aaPredicted RBP6.5□□□□□ -1.37
CPSF7-220ENST00000541963 COL1A1P02452 1464 aaPredicted RBP6.49□□□□□ -1.37
CPSF7-220ENST00000541963 CLRN2A0PK11 232 aa6.49□□□□□ -1.37
CPSF7-220ENST00000541963 GSG1L2A8MUP6 293 aa6.49□□□□□ -1.37
CPSF7-220ENST00000541963 SOD2P04179 222 aa6.49□□□□□ -1.37
CPSF7-220ENST00000541963 LDHCP07864 332 aa6.49□□□□□ -1.37
CPSF7-220ENST00000541963 HSPA1AP0DMV8 641 aaKnown RBP6.49□□□□□ -1.37
CPSF7-220ENST00000541963 HSPA1BP0DMV9 641 aaKnown RBP6.49□□□□□ -1.37
CPSF7-220ENST00000541963 RTP1P59025 263 aa6.49□□□□□ -1.37
CPSF7-220ENST00000541963 NOGQ13253 232 aa6.49□□□□□ -1.37
CPSF7-220ENST00000541963 PIK3R6Q5UE93 754 aa6.49□□□□□ -1.37
CPSF7-220ENST00000541963 CDCA2Q69YH5 1023 aaPredicted RBP6.49□□□□□ -1.37
CPSF7-220ENST00000541963 ZCCHC8Q6NZY4 707 aaKnown RBP6.49□□□□□ -1.37
CPSF7-220ENST00000541963 GALNT18Q6P9A2 607 aa6.49□□□□□ -1.37
CPSF7-220ENST00000541963 SLC23A3Q6PIS1 610 aa6.49□□□□□ -1.37
CPSF7-220ENST00000541963 EP400NLQ6ZTU2 488 aa6.49□□□□□ -1.37
CPSF7-220ENST00000541963 DTX1Q86Y01 620 aa6.49□□□□□ -1.37
CPSF7-220ENST00000541963 UBR7Q8N806 425 aa6.49□□□□□ -1.37
CPSF7-220ENST00000541963 AGBL5Q8NDL9 886 aa6.49□□□□□ -1.37
CPSF7-220ENST00000541963 ATL2Q8NHH9 583 aa6.49□□□□□ -1.37
CPSF7-220ENST00000541963 FBXW5Q969U6 566 aa6.49□□□□□ -1.37
CPSF7-220ENST00000541963 HOOK2Q96ED9 719 aa6.49□□□□□ -1.37
CPSF7-220ENST00000541963 TRMT2BQ96GJ1 504 aaKnown RBP6.49□□□□□ -1.37
CPSF7-220ENST00000541963 TMEM169Q96HH4 297 aa6.49□□□□□ -1.37
CPSF7-220ENST00000541963 TDRD3Q9H7E2 651 aaKnown RBP6.49□□□□□ -1.37
CPSF7-220ENST00000541963 CABP5Q9NP86 173 aa6.49□□□□□ -1.37
CPSF7-220ENST00000541963 CLDND1Q9NY35 253 aa6.49□□□□□ -1.37
CPSF7-220ENST00000541963 SAMD15Q9P1V8 674 aa6.49□□□□□ -1.37
CPSF7-220ENST00000541963 ZNF70Q9UC06 446 aaPredicted RBP6.49□□□□□ -1.37
CPSF7-220ENST00000541963 PDS5AQ29RF7 1337 aaKnown RBP6.49□□□□□ -1.37
CPSF7-220ENST00000541963 SALL1Q9NSC2 1324 aa6.49□□□□□ -1.37
CPSF7-220ENST00000541963 FADS2P1A8MWK0 482 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 H7BY64 318 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 CA12O43570 354 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 MSCO60682 206 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 KPNA6O60684 536 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 RAB11FIP3O75154 756 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 WNT11O96014 354 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 ZGLP1P0C6A0 271 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 RAC2P15153 192 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 POU3F2P20265 443 aaPredicted RBP6.48□□□□□ -1.37
CPSF7-220ENST00000541963 GRK2P25098 689 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 ADORA1P30542 326 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 GRK3P35626 688 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 BCL6P41182 706 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 PHKA1P46020 1223 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 CTCFP49711 727 aaPredicted RBP6.48□□□□□ -1.37
CPSF7-220ENST00000541963 SCNN1BP51168 640 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 HK2P52789 917 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 GSTO1P78417 241 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 AMPD3Q01432 767 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 TTC39AQ5SRH9 613 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 FKBP1CQ5VVH2 108 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 PRAMEF18Q5VWM3 479 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 CEP85Q6P2H3 762 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 DLK2Q6UY11 383 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 CEP68Q76N32 757 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 SPRED2Q7Z698 418 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 DZIP1Q86YF9 867 aaKnown RBP6.48□□□□□ -1.37
CPSF7-220ENST00000541963 TP53INP2Q8IXH6 220 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 TMEM52Q8NDY8 209 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 PDZD8Q8NEN9 1154 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms