RNA–Protein interactions for RNA: ENST00000540849.5

PRICKLE3-205, Transcript of prickle planar cell polarity protein 3, humanhuman

TSL 2

Gene PRICKLE3, Length 2,246 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3-205ENST00000540849 SYNGAP1Q96PV0 1343 aa14.34□□□□□ -0.11
PRICKLE3-205ENST00000540849 COL2A1P02458 1487 aaPredicted RBP14.34□□□□□ -0.11
PRICKLE3-205ENST00000540849 TRIM37O94972 964 aa14.34□□□□□ -0.11
PRICKLE3-205ENST00000540849 FTLP02792 175 aaPredicted RBP14.34□□□□□ -0.11
PRICKLE3-205ENST00000540849 NUDT17P0C025 328 aa14.34□□□□□ -0.11
PRICKLE3-205ENST00000540849 BCRP11274 1271 aa14.34□□□□□ -0.11
PRICKLE3-205ENST00000540849 PMS2P54278 862 aa14.34□□□□□ -0.11
PRICKLE3-205ENST00000540849 MYBPC2Q14324 1141 aa14.34□□□□□ -0.11
PRICKLE3-205ENST00000540849 EPC2Q52LR7 807 aa14.34□□□□□ -0.11
PRICKLE3-205ENST00000540849 UBAP2Q5T6F2 1119 aaKnown RBP14.34□□□□□ -0.11
PRICKLE3-205ENST00000540849 MEX3CQ5U5Q3 659 aaKnown RBP14.34□□□□□ -0.11
PRICKLE3-205ENST00000540849 TTC27Q6P3X3 843 aa14.34□□□□□ -0.11
PRICKLE3-205ENST00000540849 MAEAQ7L5Y9 396 aa14.34□□□□□ -0.11
PRICKLE3-205ENST00000540849 ZDHHC14Q8IZN3 488 aa14.34□□□□□ -0.11
PRICKLE3-205ENST00000540849 PRELID2Q8N945 189 aa14.34□□□□□ -0.11
PRICKLE3-205ENST00000540849 MDM1Q8TC05 714 aa14.34□□□□□ -0.11
PRICKLE3-205ENST00000540849 FBXO25Q8TCJ0 367 aa14.34□□□□□ -0.11
PRICKLE3-205ENST00000540849 IPO4Q8TEX9 1081 aaKnown RBP14.34□□□□□ -0.11
PRICKLE3-205ENST00000540849 TATDN2Q93075 761 aa14.34□□□□□ -0.11
PRICKLE3-205ENST00000540849 ZNF622Q969S3 477 aaKnown RBP eCLIP14.34□□□□□ -0.11
PRICKLE3-205ENST00000540849 RNF25Q96BH1 459 aaPredicted RBP14.34□□□□□ -0.11
PRICKLE3-205ENST00000540849 SEC16BQ96JE7 1060 aa14.34□□□□□ -0.11
PRICKLE3-205ENST00000540849 ZSWIM1Q9BR11 485 aa14.34□□□□□ -0.11
PRICKLE3-205ENST00000540849 RANBP17Q9H2T7 1088 aaKnown RBP14.34□□□□□ -0.11
PRICKLE3-205ENST00000540849 ARHGEF10LQ9HCE6 1279 aa14.34□□□□□ -0.11
PRICKLE3-205ENST00000540849 GOPCQ9HD26 462 aa14.34□□□□□ -0.11
PRICKLE3-205ENST00000540849 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.34□□□□□ -0.11
PRICKLE3-205ENST00000540849 DDX39AO00148 427 aaKnown RBP14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 DRD4P21917 467 aa14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 PLTPP55058 493 aa14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 C1orf220Q5T0J3 134 aa14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 HOOK3Q86VS8 718 aa14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 NEK9Q8TD19 979 aa14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 KAT5Q92993 513 aa14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 VTI1AQ96AJ9 217 aa14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 CABS1Q96KC9 395 aa14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 CHORDC1Q9UHD1 332 aaPredicted RBP14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 RASAL2Q9UJF2 1139 aa14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 RPTORQ8N122 1335 aa14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 MIF4GDA9UHW6 222 aaKnown RBP14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 CTNNA2P26232 953 aa14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 GCLMP48507 274 aa14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 VAMP7P51809 220 aa14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 SETQ01105 290 aaPredicted RBP14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 CETN1Q12798 172 aa14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 DRP2Q13474 957 aa14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 PLCB4Q15147 1175 aa14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 TCEAL1Q15170 157 aa14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 PADI6Q6TGC4 694 aa14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 CCDC121Q6ZUS5 278 aa14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 UBL4BQ8N7F7 174 aa14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 ZSWIM2Q8NEG5 633 aa14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 PLEKHO2Q8TD55 490 aa14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 PCDHB18PQ96TA0 734 aa14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 CBWD1Q9BRT8 395 aa14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 OSBPL7Q9BZF2 842 aa14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 PABPC3Q9H361 631 aaKnown RBP14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 CNOT10Q9H9A5 744 aaKnown RBP14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 MRPL11Q9Y3B7 192 aaKnown RBP14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 PFASO15067 1338 aa14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 AFF2P51816 1311 aa14.33□□□□□ -0.12
PRICKLE3-205ENST00000540849 PHF20L1A8MW92 1017 aa14.32□□□□□ -0.12
PRICKLE3-205ENST00000540849 IPO5O00410 1097 aaKnown RBP14.32□□□□□ -0.12
PRICKLE3-205ENST00000540849 ATMINO43313 823 aaPredicted RBP14.32□□□□□ -0.12
PRICKLE3-205ENST00000540849 ALAS1P13196 640 aa14.32□□□□□ -0.12
PRICKLE3-205ENST00000540849 CHRNB2P17787 502 aa14.32□□□□□ -0.12
PRICKLE3-205ENST00000540849 COMTP21964 271 aa14.32□□□□□ -0.12
PRICKLE3-205ENST00000540849 USP8P40818 1118 aa14.32□□□□□ -0.12
PRICKLE3-205ENST00000540849 RPL21P46778 160 aaKnown RBP14.32□□□□□ -0.12
PRICKLE3-205ENST00000540849 DRG2P55039 364 aaKnown RBP14.32□□□□□ -0.12
PRICKLE3-205ENST00000540849 GPC5P78333 572 aa14.32□□□□□ -0.12
PRICKLE3-205ENST00000540849 DENND2CQ68D51 928 aa14.32□□□□□ -0.12
PRICKLE3-205ENST00000540849 INTS8Q75QN2 995 aaKnown RBP14.32□□□□□ -0.12
PRICKLE3-205ENST00000540849 COL23A1Q86Y22 540 aaPredicted RBP14.32□□□□□ -0.12
PRICKLE3-205ENST00000540849 CPNE8Q86YQ8 564 aa14.32□□□□□ -0.12
PRICKLE3-205ENST00000540849 PRMT6Q96LA8 375 aaPredicted RBP14.32□□□□□ -0.12
PRICKLE3-205ENST00000540849 XPO6Q96QU8 1125 aaKnown RBP14.32□□□□□ -0.12
PRICKLE3-205ENST00000540849 CEP89Q96ST8 783 aa14.32□□□□□ -0.12
PRICKLE3-205ENST00000540849 FAM129AQ9BZQ8 928 aa14.32□□□□□ -0.12
PRICKLE3-205ENST00000540849 PKD2L1Q9P0L9 805 aa14.32□□□□□ -0.12
PRICKLE3-205ENST00000540849 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.32□□□□□ -0.12
PRICKLE3-205ENST00000540849 ZNF219Q9P2Y4 722 aaPredicted RBP14.32□□□□□ -0.12
PRICKLE3-205ENST00000540849 TMX2Q9Y320 296 aa14.32□□□□□ -0.12
PRICKLE3-205ENST00000540849 SGPL1O95470 568 aa14.31□□□□□ -0.12
PRICKLE3-205ENST00000540849 HSPA6P17066 643 aa14.31□□□□□ -0.12
PRICKLE3-205ENST00000540849 HMGB2P26583 209 aaKnown RBP14.31□□□□□ -0.12
PRICKLE3-205ENST00000540849 CHRNA3P32297 505 aa14.31□□□□□ -0.12
PRICKLE3-205ENST00000540849 PEX5P50542 639 aa14.31□□□□□ -0.12
PRICKLE3-205ENST00000540849 CDR1P51861 262 aa14.31□□□□□ -0.12
PRICKLE3-205ENST00000540849 MESDQ14696 234 aa14.31□□□□□ -0.12
PRICKLE3-205ENST00000540849 SWT1Q5T5J6 900 aaKnown RBP14.31□□□□□ -0.12
PRICKLE3-205ENST00000540849 ERMARDQ5T6L9 678 aa14.31□□□□□ -0.12
PRICKLE3-205ENST00000540849 NOP9Q86U38 636 aaKnown RBP14.31□□□□□ -0.12
PRICKLE3-205ENST00000540849 CACNA2D3Q8IZS8 1091 aa14.31□□□□□ -0.12
PRICKLE3-205ENST00000540849 AZI2Q9H6S1 392 aa14.31□□□□□ -0.12
PRICKLE3-205ENST00000540849 PCDHA3Q9Y5H8 950 aa14.31□□□□□ -0.12
PRICKLE3-205ENST00000540849 TCRBV7S2A1N4TA0A589 114 aa14.31□□□□□ -0.12
PRICKLE3-205ENST00000540849 ANKRD63C9JTQ0 380 aa14.31□□□□□ -0.12
PRICKLE3-205ENST00000540849 MMP10P09238 476 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms