RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 DHX33Q9H6R0 707 aaKnown RBP12.72□□□□□ -0.37
TMEM258-205ENST00000540434 PADI3Q9ULW8 664 aa12.72□□□□□ -0.37
TMEM258-205ENST00000540434 CEP131Q9UPN4 1083 aa12.72□□□□□ -0.37
TMEM258-205ENST00000540434 ZDHHC9Q9Y397 364 aa12.72□□□□□ -0.37
TMEM258-205ENST00000540434 MAP1BP46821 2468 aaKnown RBP12.72□□□□□ -0.37
TMEM258-205ENST00000540434 CEP250Q9BV73 2442 aa12.71□□□□□ -0.37
TMEM258-205ENST00000540434 SPTBN2O15020 2390 aa12.71□□□□□ -0.37
TMEM258-205ENST00000540434 MAGEB2O15479 319 aa12.71□□□□□ -0.37
TMEM258-205ENST00000540434 DGKIO75912 1065 aa12.71□□□□□ -0.37
TMEM258-205ENST00000540434 ATF7P17544 494 aaPredicted RBP12.71□□□□□ -0.37
TMEM258-205ENST00000540434 RPA1P27694 616 aa12.71□□□□□ -0.37
TMEM258-205ENST00000540434 RARRES1P49788 294 aa12.71□□□□□ -0.37
TMEM258-205ENST00000540434 GPC3P51654 580 aa12.71□□□□□ -0.37
TMEM258-205ENST00000540434 CEBPZQ03701 1054 aaKnown RBP12.71□□□□□ -0.37
TMEM258-205ENST00000540434 PDIA5Q14554 519 aa12.71□□□□□ -0.37
TMEM258-205ENST00000540434 RSPH3Q86UC2 560 aa12.71□□□□□ -0.37
TMEM258-205ENST00000540434 FAM228AQ86W67 206 aa12.71□□□□□ -0.37
TMEM258-205ENST00000540434 CRIPAKQ8N1N5 446 aa12.71□□□□□ -0.37
TMEM258-205ENST00000540434 USP28Q96RU2 1077 aa12.71□□□□□ -0.37
TMEM258-205ENST00000540434 ERVK-5Q9HDB9 667 aa12.71□□□□□ -0.37
TMEM258-205ENST00000540434 SUCLA2Q9P2R7 463 aaPredicted RBP12.71□□□□□ -0.37
TMEM258-205ENST00000540434 LRWD1Q9UFC0 647 aa12.71□□□□□ -0.37
TMEM258-205ENST00000540434 AKT3Q9Y243 479 aa12.71□□□□□ -0.37
TMEM258-205ENST00000540434 A0A087WZ62 844 aa12.7□□□□□ -0.38
TMEM258-205ENST00000540434 VWA3AA6NCI4 1184 aa12.7□□□□□ -0.38
TMEM258-205ENST00000540434 E9PMD0 336 aa12.7□□□□□ -0.38
TMEM258-205ENST00000540434 PDCP20941 246 aa12.7□□□□□ -0.38
TMEM258-205ENST00000540434 CCT6AP40227 531 aaKnown RBP12.7□□□□□ -0.38
TMEM258-205ENST00000540434 PRPHP41219 470 aa12.7□□□□□ -0.38
TMEM258-205ENST00000540434 CRYBB1P53674 252 aaPredicted RBP12.7□□□□□ -0.38
TMEM258-205ENST00000540434 BTG3Q14201 252 aaPredicted RBP12.7□□□□□ -0.38
TMEM258-205ENST00000540434 FOXD4L6Q3SYB3 417 aaPredicted RBP12.7□□□□□ -0.38
TMEM258-205ENST00000540434 NAALADL2Q58DX5 795 aa12.7□□□□□ -0.38
TMEM258-205ENST00000540434 SPECC1Q5M775 1068 aa12.7□□□□□ -0.38
TMEM258-205ENST00000540434 FOXD4L3Q6VB84 417 aaPredicted RBP12.7□□□□□ -0.38
TMEM258-205ENST00000540434 DTHD1Q6ZMT9 781 aa12.7□□□□□ -0.38
TMEM258-205ENST00000540434 TSHZ1Q6ZSZ6 1077 aa12.7□□□□□ -0.38
TMEM258-205ENST00000540434 BRAPQ7Z569 592 aa12.7□□□□□ -0.38
TMEM258-205ENST00000540434 FLCNQ8NFG4 579 aa12.7□□□□□ -0.38
TMEM258-205ENST00000540434 POF1BQ8WVV4 589 aa12.7□□□□□ -0.38
TMEM258-205ENST00000540434 PRPF31Q8WWY3 499 aaKnown RBP12.7□□□□□ -0.38
TMEM258-205ENST00000540434 PLIN2Q99541 437 aa12.7□□□□□ -0.38
TMEM258-205ENST00000540434 FDXACB1Q9BRP7 624 aaPredicted RBP12.7□□□□□ -0.38
TMEM258-205ENST00000540434 MINDY3Q9H8M7 445 aa12.7□□□□□ -0.38
TMEM258-205ENST00000540434 TUFT1Q9NNX1 390 aa12.7□□□□□ -0.38
TMEM258-205ENST00000540434 GPRC5CQ9NQ84 441 aa12.7□□□□□ -0.38
TMEM258-205ENST00000540434 TSHZ2Q9NRE2 1034 aa12.7□□□□□ -0.38
TMEM258-205ENST00000540434 ANKEF1Q9NU02 776 aa12.7□□□□□ -0.38
TMEM258-205ENST00000540434 TFIP11Q9UBB9 837 aaKnown RBP12.7□□□□□ -0.38
TMEM258-205ENST00000540434 ST3GAL5Q9UNP4 418 aa12.7□□□□□ -0.38
TMEM258-205ENST00000540434 MRPL42Q9Y6G3 142 aaKnown RBP12.7□□□□□ -0.38
TMEM258-205ENST00000540434 R4GN57 208 aa12.7□□□□□ -0.38
TMEM258-205ENST00000540434 MYH15Q9Y2K3 1946 aa12.7□□□□□ -0.38
TMEM258-205ENST00000540434 CHD8Q9HCK8 2581 aa12.7□□□□□ -0.38
TMEM258-205ENST00000540434 MARCKSP29966 332 aaPredicted RBP12.69□□□□□ -0.38
TMEM258-205ENST00000540434 NFX1Q12986 1120 aaKnown RBP12.69□□□□□ -0.38
TMEM258-205ENST00000540434 DSC3Q14574 896 aa12.69□□□□□ -0.38
TMEM258-205ENST00000540434 EMC2Q15006 297 aa12.69□□□□□ -0.38
TMEM258-205ENST00000540434 ANGPT1Q15389 498 aa12.69□□□□□ -0.38
TMEM258-205ENST00000540434 RSPO4Q2I0M5 234 aaPredicted RBP12.69□□□□□ -0.38
TMEM258-205ENST00000540434 CWF19L1Q69YN2 538 aaKnown RBP12.69□□□□□ -0.38
TMEM258-205ENST00000540434 MAEAQ7L5Y9 396 aa12.69□□□□□ -0.38
TMEM258-205ENST00000540434 RHPN2Q8IUC4 686 aa12.69□□□□□ -0.38
TMEM258-205ENST00000540434 KLHL23Q8NBE8 558 aa12.69□□□□□ -0.38
TMEM258-205ENST00000540434 ASAP3Q8TDY4 903 aa12.69□□□□□ -0.38
TMEM258-205ENST00000540434 PPP2R3CQ969Q6 453 aa12.69□□□□□ -0.38
TMEM258-205ENST00000540434 CLIC6Q96NY7 704 aa12.69□□□□□ -0.38
TMEM258-205ENST00000540434 IFT122Q9HBG6 1241 aa12.69□□□□□ -0.38
TMEM258-205ENST00000540434 DDX19AQ9NUU7 478 aaKnown RBP12.69□□□□□ -0.38
TMEM258-205ENST00000540434 DLL3Q9NYJ7 618 aa12.69□□□□□ -0.38
TMEM258-205ENST00000540434 KIAA1024Q9UPX6 916 aa12.69□□□□□ -0.38
TMEM258-205ENST00000540434 FNDC1Q4ZHG4 1894 aaPredicted RBP12.69□□□□□ -0.38
TMEM258-205ENST00000540434 LAD1O00515 517 aa12.68□□□□□ -0.38
TMEM258-205ENST00000540434 RPS6KA5O75582 802 aa12.68□□□□□ -0.38
TMEM258-205ENST00000540434 LMNAP02545 664 aaKnown RBP12.68□□□□□ -0.38
TMEM258-205ENST00000540434 ASGR2P07307 311 aa12.68□□□□□ -0.38
TMEM258-205ENST00000540434 ARL2P36404 184 aa12.68□□□□□ -0.38
TMEM258-205ENST00000540434 GATMP50440 423 aa12.68□□□□□ -0.38
TMEM258-205ENST00000540434 POLGP54098 1239 aaPredicted RBP12.68□□□□□ -0.38
TMEM258-205ENST00000540434 OTUD6AQ7L8S5 288 aa12.68□□□□□ -0.38
TMEM258-205ENST00000540434 SNX29Q8TEQ0 813 aa12.68□□□□□ -0.38
TMEM258-205ENST00000540434 BSNDQ8WZ55 320 aa12.68□□□□□ -0.38
TMEM258-205ENST00000540434 HINFPQ9BQA5 517 aa12.68□□□□□ -0.38
TMEM258-205ENST00000540434 S1PR5Q9H228 398 aa12.68□□□□□ -0.38
TMEM258-205ENST00000540434 MFSD1Q9H3U5 465 aa12.68□□□□□ -0.38
TMEM258-205ENST00000540434 FBXO2Q9UK22 296 aaPredicted RBP12.68□□□□□ -0.38
TMEM258-205ENST00000540434 SQORQ9Y6N5 450 aa12.68□□□□□ -0.38
TMEM258-205ENST00000540434 ATRXP46100 2492 aa12.67□□□□□ -0.38
TMEM258-205ENST00000540434 C2CD4DB7Z1M9 353 aa12.67□□□□□ -0.38
TMEM258-205ENST00000540434 USO1O60763 962 aaKnown RBP12.67□□□□□ -0.38
TMEM258-205ENST00000540434 DKC1O60832 514 aaKnown RBP eCLIP12.67□□□□□ -0.38
TMEM258-205ENST00000540434 SRGAP2CP0DJJ0 459 aa12.67□□□□□ -0.38
TMEM258-205ENST00000540434 ZSCAN22P10073 491 aaPredicted RBP12.67□□□□□ -0.38
TMEM258-205ENST00000540434 XRCC6P12956 609 aaKnown RBP eCLIP12.67□□□□□ -0.38
TMEM258-205ENST00000540434 HOXB3P14651 431 aaPredicted RBP12.67□□□□□ -0.38
TMEM258-205ENST00000540434 DARSP14868 501 aaKnown RBP12.67□□□□□ -0.38
TMEM258-205ENST00000540434 GLRA2P23416 452 aa12.67□□□□□ -0.38
TMEM258-205ENST00000540434 EIF4BP23588 611 aaKnown RBP12.67□□□□□ -0.38
TMEM258-205ENST00000540434 TMOD1P28289 359 aa12.67□□□□□ -0.38
TMEM258-205ENST00000540434 RFC5P40937 340 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms