RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 TUFT1Q9NNX1 390 aa14.17□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 NGRNQ9NPE2 291 aaKnown RBP14.17□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 GPRC5CQ9NQ84 441 aa14.17□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 DNAJB4Q9UDY4 337 aa14.17□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 NOL7Q9UMY1 257 aaKnown RBP14.17□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 MUC3AQ02505 3323 aa14.16□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 LRRIQ4A6NIV6 560 aa14.16□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 ST18O60284 1047 aa14.16□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 POMCP01189 267 aa14.16□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 GLRA2P23416 452 aa14.16□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 ARL2P36404 184 aa14.16□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 SMC1AQ14683 1233 aaKnown RBP14.16□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 TMEM31Q5JXX7 168 aa14.16□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 NOTUMQ6P988 496 aa14.16□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 ZNF280BQ86YH2 543 aa14.16□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 SMRP1Q8NCR6 262 aa14.16□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 AUTS2Q8WXX7 1259 aa14.16□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 APOL6Q9BWW8 343 aa14.16□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 EIF2AQ9BY44 585 aaKnown RBP14.16□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 UPF2Q9HAU5 1272 aaKnown RBP14.16□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 USP15Q9Y4E8 981 aaPredicted RBP14.16□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 PI4K2BG5E9Z4 385 aa14.15□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 B4GALT3O60512 393 aa14.15□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 EYA4O95677 639 aa14.15□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 SRGAP2BP0DMP2 458 aa14.15□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 ITGA4P13612 1032 aa14.15□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 SLC11A1P49279 550 aa14.15□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 AFF1P51825 1210 aaKnown RBP14.15□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 MBTD1Q05BQ5 628 aa14.15□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 NCBP1Q09161 790 aaKnown RBP14.15□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 COASYQ13057 564 aa14.15□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 ORC2Q13416 577 aaPredicted RBP14.15□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 MCTP1Q6DN14 999 aa14.15□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 MRPL10Q7Z7H8 261 aaKnown RBP14.15□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 CDR2LQ86X02 465 aaPredicted RBP14.15□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 VPS52Q8N1B4 723 aa14.15□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 TMEM87AQ8NBN3 555 aa14.15□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 SMG8Q8ND04 991 aaKnown RBP14.15□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 BCL7CQ8WUZ0 217 aaPredicted RBP14.15□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 FAM193BQ96PV7 902 aaPredicted RBP14.15□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 NACC1Q96RE7 527 aa14.15□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 POP1Q99575 1024 aaKnown RBP14.15□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 LRFN3Q9BTN0 628 aa14.15□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 POLR3CQ9BUI4 534 aaPredicted RBP14.15□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 TRIM6Q9C030 488 aaPredicted RBP14.15□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 HES2Q9Y543 173 aa14.15□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 IPPQ9Y573 584 aa14.15□□□□□ -0.14
TSPAN9-IT1-201ENST00000539784 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.14□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 FSD2A1L4K1 749 aa14.14□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 ARHGEF35A5YM69 484 aa14.14□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 C2orf71A6NGG8 1288 aa14.14□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 C19orf67A6NJJ6 358 aa14.14□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 B4GALT5O43286 388 aa14.14□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 DDHD2O94830 711 aa14.14□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 CXCL14O95715 111 aa14.14□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 GALTP07902 379 aa14.14□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 XRCC6P12956 609 aaKnown RBP eCLIP14.14□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 ARF4P18085 180 aaPredicted RBP14.14□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 NCLP19338 710 aaKnown RBP14.14□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 AXLP30530 894 aa14.14□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 CCT6AP40227 531 aaKnown RBP14.14□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 BMS1Q14692 1282 aaKnown RBP14.14□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 MRPL43Q8N983 215 aaKnown RBP14.14□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 RSPH1Q8WYR4 309 aa14.14□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 IGSF21Q96ID5 467 aa14.14□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 CSRNP2Q9H175 543 aa14.14□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 RNF39Q9H2S5 420 aa14.14□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 C11orf16Q9NQ32 467 aa14.14□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 DBR1Q9UK59 544 aaKnown RBP14.14□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 PCDHB6Q9Y5E3 794 aa14.14□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 CNTNAP2Q9UHC6 1331 aa14.14□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 DCXO43602 365 aa14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 CD2BP2O95400 341 aaKnown RBP14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 NPTXRO95502 500 aa14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 SSBP05455 408 aaKnown RBP eCLIP14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 ALADP13716 330 aa14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 LIG1P18858 919 aa14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 U2AF2P26368 475 aaKnown RBP eCLIP14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 RPA1P27694 616 aa14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 MLH1P40692 756 aa14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 TRAPPC10P48553 1259 aa14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 TOB1P50616 345 aaPredicted RBP14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 POU5F1BQ06416 359 aa14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 PTGDRQ13258 359 aa14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 PCBP1Q15365 356 aaKnown RBP eCLIP14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 AMHR2Q16671 573 aa14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 TMEM132AQ24JP5 1023 aa14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 HAUS3Q68CZ6 603 aa14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 ANKRD54Q6NXT1 300 aa14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 PADI6Q6TGC4 694 aa14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 IFNLR1Q8IU57 520 aaPredicted RBP14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 C4orf32Q8N8J7 132 aa14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 CNNM3Q8NE01 707 aa14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 MCPH1Q8NEM0 835 aa14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 GAD1Q99259 594 aa14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 ZBP1Q9H171 429 aa14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 NXF3Q9H4D5 531 aaKnown RBP14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 POLD4Q9HCU8 107 aa14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 KANSL3Q9P2N6 904 aa14.13□□□□□ -0.15
TSPAN9-IT1-201ENST00000539784 LRWD1Q9UFC0 647 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms