RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 POLR3CQ9BUI4 534 aaPredicted RBP16.63■□□□□ 0.25
RAB40B-202ENST00000538809 NRDE2Q9H7Z3 1164 aa16.63■□□□□ 0.25
RAB40B-202ENST00000538809 PUF60Q9UHX1 559 aaKnown RBP16.63■□□□□ 0.25
RAB40B-202ENST00000538809 C2orf16Q68DN1 1984 aa16.62■□□□□ 0.25
RAB40B-202ENST00000538809 ZNF623O75123 536 aa16.62■□□□□ 0.25
RAB40B-202ENST00000538809 GJB2P29033 226 aa16.62■□□□□ 0.25
RAB40B-202ENST00000538809 CA8P35219 290 aa16.62■□□□□ 0.25
RAB40B-202ENST00000538809 ARL2P36404 184 aa16.62■□□□□ 0.25
RAB40B-202ENST00000538809 KRT17Q04695 432 aa16.62■□□□□ 0.25
RAB40B-202ENST00000538809 RNASELQ05823 741 aaKnown RBP16.62■□□□□ 0.25
RAB40B-202ENST00000538809 ZP2Q05996 745 aa16.62■□□□□ 0.25
RAB40B-202ENST00000538809 MBTD1Q05BQ5 628 aa16.62■□□□□ 0.25
RAB40B-202ENST00000538809 SMAD2Q15796 467 aaKnown RBP16.62■□□□□ 0.25
RAB40B-202ENST00000538809 TMC7Q7Z402 723 aa16.62■□□□□ 0.25
RAB40B-202ENST00000538809 ERMNQ8TAM6 284 aa16.62■□□□□ 0.25
RAB40B-202ENST00000538809 PGBD4Q96DM1 585 aa16.62■□□□□ 0.25
RAB40B-202ENST00000538809 EIF2AQ9BY44 585 aaKnown RBP16.62■□□□□ 0.25
RAB40B-202ENST00000538809 RSAD1Q9HA92 442 aa16.62■□□□□ 0.25
RAB40B-202ENST00000538809 DNAJB4Q9UDY4 337 aa16.62■□□□□ 0.25
RAB40B-202ENST00000538809 KIF3AQ9Y496 699 aa16.62■□□□□ 0.25
RAB40B-202ENST00000538809 PCDHB6Q9Y5E3 794 aa16.62■□□□□ 0.25
RAB40B-202ENST00000538809 LRRIQ4A6NIV6 560 aa16.61■□□□□ 0.25
RAB40B-202ENST00000538809 B4GALT5O43286 388 aa16.61■□□□□ 0.25
RAB40B-202ENST00000538809 XRCC6P12956 609 aaKnown RBP eCLIP16.61■□□□□ 0.25
RAB40B-202ENST00000538809 RPA1P27694 616 aa16.61■□□□□ 0.25
RAB40B-202ENST00000538809 ALDH7A1P49419 539 aaKnown RBP16.61■□□□□ 0.25
RAB40B-202ENST00000538809 FXR2P51116 673 aaKnown RBP eCLIP16.61■□□□□ 0.25
RAB40B-202ENST00000538809 AFF1P51825 1210 aaKnown RBP16.61■□□□□ 0.25
RAB40B-202ENST00000538809 AMHR2Q16671 573 aa16.61■□□□□ 0.25
RAB40B-202ENST00000538809 MCTP1Q6DN14 999 aa16.61■□□□□ 0.25
RAB40B-202ENST00000538809 PDE12Q6L8Q7 609 aaKnown RBP16.61■□□□□ 0.25
RAB40B-202ENST00000538809 LLGL2Q6P1M3 1020 aa16.61■□□□□ 0.25
RAB40B-202ENST00000538809 ZNF280BQ86YH2 543 aa16.61■□□□□ 0.25
RAB40B-202ENST00000538809 IFNLR1Q8IU57 520 aaPredicted RBP16.61■□□□□ 0.25
RAB40B-202ENST00000538809 SMG8Q8ND04 991 aaKnown RBP16.61■□□□□ 0.25
RAB40B-202ENST00000538809 URGCPQ8TCY9 931 aa16.61■□□□□ 0.25
RAB40B-202ENST00000538809 BCL7CQ8WUZ0 217 aaPredicted RBP16.61■□□□□ 0.25
RAB40B-202ENST00000538809 TMEM169Q96HH4 297 aa16.61■□□□□ 0.25
RAB40B-202ENST00000538809 APOL6Q9BWW8 343 aa16.61■□□□□ 0.25
RAB40B-202ENST00000538809 DBR1Q9UK59 544 aaKnown RBP16.61■□□□□ 0.25
RAB40B-202ENST00000538809 HES2Q9Y543 173 aa16.61■□□□□ 0.25
RAB40B-202ENST00000538809 CITO14578 2027 aa16.6■□□□□ 0.25
RAB40B-202ENST00000538809 ARHGEF35A5YM69 484 aa16.6■□□□□ 0.25
RAB40B-202ENST00000538809 ARF4P18085 180 aaPredicted RBP16.6■□□□□ 0.25
RAB40B-202ENST00000538809 NCLP19338 710 aaKnown RBP16.6■□□□□ 0.25
RAB40B-202ENST00000538809 CCT6AP40227 531 aaKnown RBP16.6■□□□□ 0.25
RAB40B-202ENST00000538809 SLC11A1P49279 550 aa16.6■□□□□ 0.25
RAB40B-202ENST00000538809 PTGDRQ13258 359 aa16.6■□□□□ 0.25
RAB40B-202ENST00000538809 CUL4AQ13619 759 aa16.6■□□□□ 0.25
RAB40B-202ENST00000538809 ECM1Q16610 540 aa16.6■□□□□ 0.25
RAB40B-202ENST00000538809 HAUS3Q68CZ6 603 aa16.6■□□□□ 0.25
RAB40B-202ENST00000538809 NOTUMQ6P988 496 aa16.6■□□□□ 0.25
RAB40B-202ENST00000538809 MRPL10Q7Z7H8 261 aaKnown RBP16.6■□□□□ 0.25
RAB40B-202ENST00000538809 CDR2LQ86X02 465 aaPredicted RBP16.6■□□□□ 0.25
RAB40B-202ENST00000538809 ADHFE1Q8IWW8 467 aa16.6■□□□□ 0.25
RAB40B-202ENST00000538809 SMRP1Q8NCR6 262 aa16.6■□□□□ 0.25
RAB40B-202ENST00000538809 AUTS2Q8WXX7 1259 aa16.6■□□□□ 0.25
RAB40B-202ENST00000538809 NACC1Q96RE7 527 aa16.6■□□□□ 0.25
RAB40B-202ENST00000538809 CDCA3Q99618 268 aaPredicted RBP16.6■□□□□ 0.25
RAB40B-202ENST00000538809 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.6■□□□□ 0.25
RAB40B-202ENST00000538809 PRKAG3Q9UGI9 489 aa16.6■□□□□ 0.25
RAB40B-202ENST00000538809 RAPGEFL1Q9UHV5 662 aa16.6■□□□□ 0.25
RAB40B-202ENST00000538809 IPPQ9Y573 584 aa16.6■□□□□ 0.25
RAB40B-202ENST00000538809 CNTNAP2Q9UHC6 1331 aa16.6■□□□□ 0.25
RAB40B-202ENST00000538809 DENND4AQ7Z401 1863 aa16.6■□□□□ 0.25
RAB40B-202ENST00000538809 MYH15Q9Y2K3 1946 aa16.59■□□□□ 0.25
RAB40B-202ENST00000538809 MTCL1Q9Y4B5 1905 aaKnown RBP16.59■□□□□ 0.25
RAB40B-202ENST00000538809 FAM86C2PA6NEL3 165 aa16.59■□□□□ 0.25
RAB40B-202ENST00000538809 DDHD2O94830 711 aa16.59■□□□□ 0.25
RAB40B-202ENST00000538809 EYA4O95677 639 aa16.59■□□□□ 0.25
RAB40B-202ENST00000538809 POMCP01189 267 aa16.59■□□□□ 0.25
RAB40B-202ENST00000538809 GALTP07902 379 aa16.59■□□□□ 0.25
RAB40B-202ENST00000538809 ITGA4P13612 1032 aa16.59■□□□□ 0.25
RAB40B-202ENST00000538809 AXLP30530 894 aa16.59■□□□□ 0.25
RAB40B-202ENST00000538809 POU5F1BQ06416 359 aa16.59■□□□□ 0.25
RAB40B-202ENST00000538809 COASYQ13057 564 aa16.59■□□□□ 0.25
RAB40B-202ENST00000538809 SMC1AQ14683 1233 aaKnown RBP16.59■□□□□ 0.25
RAB40B-202ENST00000538809 PADI6Q6TGC4 694 aa16.59■□□□□ 0.25
RAB40B-202ENST00000538809 VPS52Q8N1B4 723 aa16.59■□□□□ 0.25
RAB40B-202ENST00000538809 IGSF22Q8N9C0 903 aa16.59■□□□□ 0.25
RAB40B-202ENST00000538809 MCPH1Q8NEM0 835 aa16.59■□□□□ 0.25
RAB40B-202ENST00000538809 RSPH1Q8WYR4 309 aa16.59■□□□□ 0.25
RAB40B-202ENST00000538809 BSNDQ8WZ55 320 aa16.59■□□□□ 0.25
RAB40B-202ENST00000538809 IGSF21Q96ID5 467 aa16.59■□□□□ 0.25
RAB40B-202ENST00000538809 APOL5Q9BWW9 433 aa16.59■□□□□ 0.25
RAB40B-202ENST00000538809 C1QTNF1Q9BXJ1 281 aa16.59■□□□□ 0.25
RAB40B-202ENST00000538809 CSRNP2Q9H175 543 aa16.59■□□□□ 0.25
RAB40B-202ENST00000538809 RNF39Q9H2S5 420 aa16.59■□□□□ 0.25
RAB40B-202ENST00000538809 NXF3Q9H4D5 531 aaKnown RBP16.59■□□□□ 0.25
RAB40B-202ENST00000538809 NGRNQ9NPE2 291 aaKnown RBP16.59■□□□□ 0.25
RAB40B-202ENST00000538809 LRWD1Q9UFC0 647 aa16.59■□□□□ 0.25
RAB40B-202ENST00000538809 USP15Q9Y4E8 981 aaPredicted RBP16.59■□□□□ 0.25
RAB40B-202ENST00000538809 PDCD11Q14690 1871 aaKnown RBP16.59■□□□□ 0.25
RAB40B-202ENST00000538809 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.58■□□□□ 0.24
RAB40B-202ENST00000538809 C2orf71A6NGG8 1288 aa16.58■□□□□ 0.24
RAB40B-202ENST00000538809 PP2D1A8MPX8 630 aa16.58■□□□□ 0.24
RAB40B-202ENST00000538809 NPTXRO95502 500 aa16.58■□□□□ 0.24
RAB40B-202ENST00000538809 COL9A1P20849 921 aa16.58■□□□□ 0.24
RAB40B-202ENST00000538809 MUTP22033 750 aa16.58■□□□□ 0.24
RAB40B-202ENST00000538809 MLH1P40692 756 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms