RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 CCDC113Q9H0I3 377 aa18.94■□□□□ 0.62
CLN6-202ENST00000538696 MINDY3Q9H8M7 445 aa18.94■□□□□ 0.62
CLN6-202ENST00000538696 FANCLQ9NW38 375 aa18.94■□□□□ 0.62
CLN6-202ENST00000538696 RWDD2AQ9UIY3 292 aa18.94■□□□□ 0.62
CLN6-202ENST00000538696 NFE2L3Q9Y4A8 694 aa18.94■□□□□ 0.62
CLN6-202ENST00000538696 PHLPP2Q6ZVD8 1323 aa18.94■□□□□ 0.62
CLN6-202ENST00000538696 EVI5O60447 810 aa18.93■□□□□ 0.62
CLN6-202ENST00000538696 TIMP1P01033 207 aa18.93■□□□□ 0.62
CLN6-202ENST00000538696 IQCF3P0C7M6 154 aa18.93■□□□□ 0.62
CLN6-202ENST00000538696 MYBP10242 640 aa18.93■□□□□ 0.62
CLN6-202ENST00000538696 ZNF75DP51815 510 aa18.93■□□□□ 0.62
CLN6-202ENST00000538696 CASP5P51878 434 aa18.93■□□□□ 0.62
CLN6-202ENST00000538696 SMTNP53814 917 aa18.93■□□□□ 0.62
CLN6-202ENST00000538696 CCL23P55773 120 aa18.93■□□□□ 0.62
CLN6-202ENST00000538696 STIM1Q13586 685 aa18.93■□□□□ 0.62
CLN6-202ENST00000538696 LPIN1Q14693 890 aa18.93■□□□□ 0.62
CLN6-202ENST00000538696 GPNMBQ14956 572 aa18.93■□□□□ 0.62
CLN6-202ENST00000538696 COBLL1Q53SF7 1204 aa18.93■□□□□ 0.62
CLN6-202ENST00000538696 SPATA1Q5VX52 437 aa18.93■□□□□ 0.62
CLN6-202ENST00000538696 TAS1R3Q7RTX0 852 aa18.93■□□□□ 0.62
CLN6-202ENST00000538696 SRGAP1Q7Z6B7 1085 aa18.93■□□□□ 0.62
CLN6-202ENST00000538696 C2orf40Q9H1Z8 148 aa18.93■□□□□ 0.62
CLN6-202ENST00000538696 MRPL44Q9H9J2 332 aaKnown RBP18.93■□□□□ 0.62
CLN6-202ENST00000538696 NOC2LQ9Y3T9 749 aaKnown RBP18.93■□□□□ 0.62
CLN6-202ENST00000538696 NBNO60934 754 aa18.92■□□□□ 0.62
CLN6-202ENST00000538696 CSDE1O75534 798 aaKnown RBP18.92■□□□□ 0.62
CLN6-202ENST00000538696 PPP1R37O75864 691 aa18.92■□□□□ 0.62
CLN6-202ENST00000538696 EDN1P05305 212 aa18.92■□□□□ 0.62
CLN6-202ENST00000538696 GHRP10912 638 aa18.92■□□□□ 0.62
CLN6-202ENST00000538696 ATP1A3P13637 1013 aa18.92■□□□□ 0.62
CLN6-202ENST00000538696 FGFR4P22455 802 aa18.92■□□□□ 0.62
CLN6-202ENST00000538696 EIF4BP23588 611 aaKnown RBP18.92■□□□□ 0.62
CLN6-202ENST00000538696 PSMD2Q13200 908 aa18.92■□□□□ 0.62
CLN6-202ENST00000538696 ZNF720Q7Z2F6 126 aa18.92■□□□□ 0.62
CLN6-202ENST00000538696 HAUS6Q7Z4H7 955 aa18.92■□□□□ 0.62
CLN6-202ENST00000538696 FAM228AQ86W67 206 aa18.92■□□□□ 0.62
CLN6-202ENST00000538696 DPF3Q92784 378 aa18.92■□□□□ 0.62
CLN6-202ENST00000538696 KCNN1Q92952 543 aa18.92■□□□□ 0.62
CLN6-202ENST00000538696 STRA6Q9BX79 667 aa18.92■□□□□ 0.62
CLN6-202ENST00000538696 TRIM5Q9C035 493 aa18.92■□□□□ 0.62
CLN6-202ENST00000538696 ST6GALNAC4Q9H4F1 302 aa18.92■□□□□ 0.62
CLN6-202ENST00000538696 KCNG1Q9UIX4 513 aa18.92■□□□□ 0.62
CLN6-202ENST00000538696 MICAL3Q7RTP6 2002 aa18.91■□□□□ 0.62
CLN6-202ENST00000538696 DENND3A2RUS2 1198 aa18.91■□□□□ 0.62
CLN6-202ENST00000538696 TRIM49BA6NDI0 452 aa18.91■□□□□ 0.62
CLN6-202ENST00000538696 INO80B-WBP1J3KQ70 363 aa18.91■□□□□ 0.62
CLN6-202ENST00000538696 PSMA7O14818 248 aa18.91■□□□□ 0.62
CLN6-202ENST00000538696 GCNT3O95395 438 aa18.91■□□□□ 0.62
CLN6-202ENST00000538696 RAG1P15918 1043 aa18.91■□□□□ 0.62
CLN6-202ENST00000538696 PMS1P54277 932 aaKnown RBP18.91■□□□□ 0.62
CLN6-202ENST00000538696 AMHR2Q16671 573 aa18.91■□□□□ 0.62
CLN6-202ENST00000538696 ZC2HC1CQ53FD0 456 aaPredicted RBP18.91■□□□□ 0.62
CLN6-202ENST00000538696 DHTKD1Q96HY7 919 aaPredicted RBP18.91■□□□□ 0.62
CLN6-202ENST00000538696 INO80BQ9C086 356 aaPredicted RBP18.91■□□□□ 0.62
CLN6-202ENST00000538696 TMEM134Q9H6X4 195 aa18.91■□□□□ 0.62
CLN6-202ENST00000538696 AGO3Q9H9G7 860 aaKnown RBP18.91■□□□□ 0.62
CLN6-202ENST00000538696 SAMSN1Q9NSI8 373 aaKnown RBP18.91■□□□□ 0.62
CLN6-202ENST00000538696 ZMYND8Q9ULU4 1186 aaPredicted RBP18.91■□□□□ 0.62
CLN6-202ENST00000538696 H0YCG3 227 aa18.9■□□□□ 0.62
CLN6-202ENST00000538696 PRKCBP05771 671 aa18.9■□□□□ 0.62
CLN6-202ENST00000538696 ZNF18P17022 549 aa18.9■□□□□ 0.62
CLN6-202ENST00000538696 SYN1P17600 705 aa18.9■□□□□ 0.62
CLN6-202ENST00000538696 CCNE1P24864 410 aa18.9■□□□□ 0.62
CLN6-202ENST00000538696 EFNA5P52803 228 aa18.9■□□□□ 0.62
CLN6-202ENST00000538696 GTF2BQ00403 316 aa18.9■□□□□ 0.62
CLN6-202ENST00000538696 HSP90AA4PQ58FG1 418 aa18.9■□□□□ 0.62
CLN6-202ENST00000538696 PPP4R3CPQ6ZMV5 832 aa18.9■□□□□ 0.62
CLN6-202ENST00000538696 TSHZ1Q6ZSZ6 1077 aa18.9■□□□□ 0.62
CLN6-202ENST00000538696 EPM2AIP1Q7L775 607 aaPredicted RBP18.9■□□□□ 0.62
CLN6-202ENST00000538696 SLC17A8Q8NDX2 589 aa18.9■□□□□ 0.62
CLN6-202ENST00000538696 P2RX5Q93086 422 aa18.9■□□□□ 0.62
CLN6-202ENST00000538696 FZD8Q9H461 694 aa18.9■□□□□ 0.62
CLN6-202ENST00000538696 ERVK-5Q9HDB9 667 aa18.9■□□□□ 0.62
CLN6-202ENST00000538696 PRKAG2Q9UGJ0 569 aa18.9■□□□□ 0.62
CLN6-202ENST00000538696 SQORQ9Y6N5 450 aa18.9■□□□□ 0.62
CLN6-202ENST00000538696 RPS6KA5O75582 802 aa18.89■□□□□ 0.61
CLN6-202ENST00000538696 CAPN15O75808 1086 aa18.89■□□□□ 0.61
CLN6-202ENST00000538696 PRPF6O94906 941 aaKnown RBP18.89■□□□□ 0.61
CLN6-202ENST00000538696 SFPQP23246 707 aaKnown RBP eCLIP18.89■□□□□ 0.61
CLN6-202ENST00000538696 CD52P31358 61 aa18.89■□□□□ 0.61
CLN6-202ENST00000538696 PPP1R2P41236 205 aa18.89■□□□□ 0.61
CLN6-202ENST00000538696 FANCCQ00597 558 aa18.89■□□□□ 0.61
CLN6-202ENST00000538696 ALCAMQ13740 583 aa18.89■□□□□ 0.61
CLN6-202ENST00000538696 MAPK6Q16659 721 aa18.89■□□□□ 0.61
CLN6-202ENST00000538696 FAM187BQ17R55 369 aa18.89■□□□□ 0.61
CLN6-202ENST00000538696 MFSD5Q6N075 450 aa18.89■□□□□ 0.61
CLN6-202ENST00000538696 TTI2Q6NXR4 508 aa18.89■□□□□ 0.61
CLN6-202ENST00000538696 GUF1Q8N442 669 aaKnown RBP18.89■□□□□ 0.61
CLN6-202ENST00000538696 HVCN1Q96D96 273 aa18.89■□□□□ 0.61
CLN6-202ENST00000538696 VWCEQ96DN2 955 aa18.89■□□□□ 0.61
CLN6-202ENST00000538696 SEMA6BQ9H3T3 888 aa18.89■□□□□ 0.61
CLN6-202ENST00000538696 PRMT7Q9NVM4 692 aaPredicted RBP18.89■□□□□ 0.61
CLN6-202ENST00000538696 ZMYM2Q9UBW7 1377 aa18.88■□□□□ 0.61
CLN6-202ENST00000538696 UBE4BO95155 1302 aa18.88■□□□□ 0.61
CLN6-202ENST00000538696 TTLL13PA6NNM8 815 aa18.88■□□□□ 0.61
CLN6-202ENST00000538696 K7ERI5 159 aa18.88■□□□□ 0.61
CLN6-202ENST00000538696 EIF3DO15371 548 aaKnown RBP eCLIP18.88■□□□□ 0.61
CLN6-202ENST00000538696 B4GALT5O43286 388 aa18.88■□□□□ 0.61
CLN6-202ENST00000538696 TSPAN1O60635 241 aa18.88■□□□□ 0.61
CLN6-202ENST00000538696 PARNO95453 639 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms