RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 KATNAL1Q9BW62 490 aa6.22□□□□□ -1.41
SNHG1-207ENST00000537965 OSBPL7Q9BZF2 842 aa6.22□□□□□ -1.41
SNHG1-207ENST00000537965 GSX1Q9H4S2 264 aaPredicted RBP6.22□□□□□ -1.41
SNHG1-207ENST00000537965 EPHX3Q9H6B9 360 aa6.22□□□□□ -1.41
SNHG1-207ENST00000537965 CERS4Q9HA82 394 aa6.22□□□□□ -1.41
SNHG1-207ENST00000537965 TOMM22Q9NS69 142 aa6.22□□□□□ -1.41
SNHG1-207ENST00000537965 RAPGEFL1Q9UHV5 662 aa6.22□□□□□ -1.41
SNHG1-207ENST00000537965 RCAN3Q9UKA8 241 aa6.22□□□□□ -1.41
SNHG1-207ENST00000537965 FAM50BQ9Y247 325 aa6.22□□□□□ -1.41
SNHG1-207ENST00000537965 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.22□□□□□ -1.41
SNHG1-207ENST00000537965 ACTL7BQ9Y614 415 aa6.22□□□□□ -1.41
SNHG1-207ENST00000537965 COL4A4P53420 1690 aaPredicted RBP6.22□□□□□ -1.41
SNHG1-207ENST00000537965 MYO10Q9HD67 2058 aa6.22□□□□□ -1.41
SNHG1-207ENST00000537965 PRR19A6NJB7 356 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 PI4K2BG5E9Z4 385 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 RFXAPO00287 272 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 NFIBO00712 420 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 TGFB1P01137 390 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 GH1P01241 217 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 P4HBP07237 508 aaKnown RBP6.21□□□□□ -1.42
SNHG1-207ENST00000537965 FGRP09769 529 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 ALADP13716 330 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 EDNRBP24530 442 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 SLC16A2P36021 539 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 CD97P48960 835 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 MFAP1P55081 439 aaKnown RBP6.21□□□□□ -1.42
SNHG1-207ENST00000537965 SNAP25P60880 206 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 ERVK-21P61565 698 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 RPS6P62753 249 aaKnown RBP6.21□□□□□ -1.42
SNHG1-207ENST00000537965 RBL2Q08999 1139 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 GRB10Q13322 594 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 DGKDQ16760 1214 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 PTPROQ16827 1216 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 KCNV1Q6PIU1 500 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 PAOXQ6QHF9 649 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 SND1Q7KZF4 910 aaKnown RBP eCLIP6.21□□□□□ -1.42
SNHG1-207ENST00000537965 LRRC8DQ7L1W4 858 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 DYMQ7RTS9 669 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 MCF2L2Q86YR7 1114 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 C7orf31Q8N865 590 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 SHKBP1Q8TBC3 707 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 NSUN6Q8TEA1 469 aaKnown RBP6.21□□□□□ -1.42
SNHG1-207ENST00000537965 CHMP4CQ96CF2 233 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 EVI5LQ96CN4 794 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 VWCEQ96DN2 955 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 SAMD11Q96NU1 681 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 YIPF2Q9BWQ6 316 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 KCNH6Q9H252 994 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 CCDC86Q9H6F5 360 aaKnown RBP6.21□□□□□ -1.42
SNHG1-207ENST00000537965 IL17RBQ9NRM6 502 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 HELLSQ9NRZ9 838 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 GPN3Q9UHW5 284 aaPredicted RBP6.21□□□□□ -1.42
SNHG1-207ENST00000537965 INSL6Q9Y581 213 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 TTC3P53804 2025 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 XIRP2A4UGR9 3374 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 EMSYQ7Z589 1322 aa6.21□□□□□ -1.42
SNHG1-207ENST00000537965 ZNF318Q5VUA4 2279 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 TRIOO75962 3097 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.2□□□□□ -1.42
SNHG1-207ENST00000537965 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.2□□□□□ -1.42
SNHG1-207ENST00000537965 PRR33A8MZF0 331 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 NCK2O43639 380 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 NMT2O60551 498 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 GJB5O95377 273 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 CXCL10P02778 98 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 GSTP1P09211 210 aaKnown RBP6.2□□□□□ -1.42
SNHG1-207ENST00000537965 PDHBP11177 359 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 GSTT1P30711 240 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 SSTR4P31391 388 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 CHMP4BP1P59074 171 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 WDR5P61964 334 aaKnown RBP6.2□□□□□ -1.42
SNHG1-207ENST00000537965 ZNF543Q08ER8 600 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 TRAF1Q13077 416 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 NFKBIBQ15653 356 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 STXBP2Q15833 593 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 LEXMQ3ZCV2 418 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 RRP12Q5JTH9 1297 aaKnown RBP6.2□□□□□ -1.42
SNHG1-207ENST00000537965 TMEM63BQ5T3F8 832 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 TTBK2Q6IQ55 1244 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 CCDC62Q6P9F0 684 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 MFSD6Q6ZSS7 791 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 PDZD3Q86UT5 571 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 SAMD3Q8N6K7 520 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 CLEC4DQ8WXI8 215 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 WDR89Q96FK6 387 aaPredicted RBP6.2□□□□□ -1.42
SNHG1-207ENST00000537965 MFSD14AQ96MC6 490 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 SEC62Q99442 399 aaKnown RBP6.2□□□□□ -1.42
SNHG1-207ENST00000537965 TMEM47Q9BQJ4 181 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 UPF3BQ9BZI7 483 aaKnown RBP6.2□□□□□ -1.42
SNHG1-207ENST00000537965 RNF41Q9H4P4 317 aaPredicted RBP6.2□□□□□ -1.42
SNHG1-207ENST00000537965 UBE2ZQ9H832 354 aaPredicted RBP6.2□□□□□ -1.42
SNHG1-207ENST00000537965 KRT82Q9NSB4 513 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 FAM105AQ9NUU6 356 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 MAP3K20Q9NYL2 800 aaKnown RBP6.2□□□□□ -1.42
SNHG1-207ENST00000537965 MYH9P35579 1960 aaKnown RBP6.2□□□□□ -1.42
SNHG1-207ENST00000537965 ABCB11O95342 1321 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 EVPLQ92817 2033 aa6.2□□□□□ -1.42
SNHG1-207ENST00000537965 DOCK5Q9H7D0 1870 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 PTPRZ1P23471 2315 aaPredicted RBP6.19□□□□□ -1.42
SNHG1-207ENST00000537965 EPOPA6NHQ4 379 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms