RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 NAGPAQ9UK23 515 aa18.97■□□□□ 0.63
SNX17-210ENST00000537606 BZW2Q9Y6E2 419 aaKnown RBP18.97■□□□□ 0.63
SNX17-210ENST00000537606 GSTTP1A0A1W2PQM5 241 aa18.96■□□□□ 0.63
SNX17-210ENST00000537606 PALMO75781 387 aa18.96■□□□□ 0.63
SNX17-210ENST00000537606 ATG7O95352 703 aa18.96■□□□□ 0.63
SNX17-210ENST00000537606 OATP04181 439 aa18.96■□□□□ 0.63
SNX17-210ENST00000537606 EDNRBP24530 442 aa18.96■□□□□ 0.63
SNX17-210ENST00000537606 SOX5P35711 763 aa18.96■□□□□ 0.63
SNX17-210ENST00000537606 PRKCIP41743 596 aa18.96■□□□□ 0.63
SNX17-210ENST00000537606 MRPS25P82663 173 aaKnown RBP18.96■□□□□ 0.63
SNX17-210ENST00000537606 EMC2Q15006 297 aa18.96■□□□□ 0.63
SNX17-210ENST00000537606 NAB2Q15742 525 aa18.96■□□□□ 0.63
SNX17-210ENST00000537606 CREG2Q8IUH2 290 aa18.96■□□□□ 0.63
SNX17-210ENST00000537606 ARHGEF19Q8IW93 802 aa18.96■□□□□ 0.63
SNX17-210ENST00000537606 SPIRE2Q8WWL2 714 aa18.96■□□□□ 0.63
SNX17-210ENST00000537606 POMGNT1Q8WZA1 660 aa18.96■□□□□ 0.63
SNX17-210ENST00000537606 FAM84AQ96KN4 292 aa18.96■□□□□ 0.63
SNX17-210ENST00000537606 PCYT2Q99447 389 aa18.96■□□□□ 0.63
SNX17-210ENST00000537606 ZCCHC17Q9NP64 241 aaKnown RBP18.96■□□□□ 0.63
SNX17-210ENST00000537606 UBE2TQ9NPD8 197 aaPredicted RBP18.96■□□□□ 0.63
SNX17-210ENST00000537606 LUC7LQ9NQ29 371 aaKnown RBP18.96■□□□□ 0.63
SNX17-210ENST00000537606 HNRNPDLO14979 420 aaKnown RBP18.96■□□□□ 0.63
SNX17-210ENST00000537606 POLR3GO15318 223 aaPredicted RBP18.96■□□□□ 0.63
SNX17-210ENST00000537606 ARIH2O95376 493 aa18.96■□□□□ 0.63
SNX17-210ENST00000537606 GGPS1O95749 300 aa18.96■□□□□ 0.63
SNX17-210ENST00000537606 CYP2C8P10632 490 aa18.96■□□□□ 0.63
SNX17-210ENST00000537606 MAP2K1Q02750 393 aaPredicted RBP18.96■□□□□ 0.63
SNX17-210ENST00000537606 MKRN3Q13064 507 aaKnown RBP18.96■□□□□ 0.63
SNX17-210ENST00000537606 TAS1R3Q7RTX0 852 aa18.96■□□□□ 0.63
SNX17-210ENST00000537606 ZC3H15Q8WU90 426 aaKnown RBP18.96■□□□□ 0.63
SNX17-210ENST00000537606 BICD1Q96G01 975 aa18.96■□□□□ 0.63
SNX17-210ENST00000537606 TMCO5BA8MYB1 307 aa18.95■□□□□ 0.62
SNX17-210ENST00000537606 FOXN3O00409 490 aaPredicted RBP18.95■□□□□ 0.62
SNX17-210ENST00000537606 DDX3XO00571 662 aaKnown RBP eCLIP18.95■□□□□ 0.621e-10■■■□□ 17.5
SNX17-210ENST00000537606 FTCDO95954 541 aa18.95■□□□□ 0.62
SNX17-210ENST00000537606 GPAT2Q6NUI2 795 aa18.95■□□□□ 0.62
SNX17-210ENST00000537606 ARMC9Q7Z3E5 817 aa18.95■□□□□ 0.62
SNX17-210ENST00000537606 SLC17A8Q8NDX2 589 aa18.95■□□□□ 0.62
SNX17-210ENST00000537606 IFT74Q96LB3 600 aa18.95■□□□□ 0.62
SNX17-210ENST00000537606 TMEM117Q9H0C3 514 aa18.95■□□□□ 0.62
SNX17-210ENST00000537606 TAF1DQ9H5J8 278 aaPredicted RBP18.95■□□□□ 0.62
SNX17-210ENST00000537606 TOPORSQ9NS56 1045 aaPredicted RBP18.95■□□□□ 0.62
SNX17-210ENST00000537606 PACSIN2Q9UNF0 486 aaPredicted RBP18.95■□□□□ 0.62
SNX17-210ENST00000537606 CLEC11AQ9Y240 323 aa18.95■□□□□ 0.62
SNX17-210ENST00000537606 FERP16591 822 aa18.95■□□□□ 0.62
SNX17-210ENST00000537606 GPR162Q16538 588 aa18.95■□□□□ 0.62
SNX17-210ENST00000537606 PTPROQ16827 1216 aa18.95■□□□□ 0.62
SNX17-210ENST00000537606 TMEM63BQ5T3F8 832 aa18.95■□□□□ 0.62
SNX17-210ENST00000537606 GLYCTKQ8IVS8 523 aa18.95■□□□□ 0.62
SNX17-210ENST00000537606 TXLNBQ8N3L3 684 aa18.95■□□□□ 0.62
SNX17-210ENST00000537606 U2AF1L4Q8WU68 220 aaKnown RBP18.95■□□□□ 0.62
SNX17-210ENST00000537606 KAT5Q92993 513 aa18.95■□□□□ 0.62
SNX17-210ENST00000537606 FGD4Q96M96 766 aa18.95■□□□□ 0.62
SNX17-210ENST00000537606 OSBPL9Q96SU4 736 aa18.95■□□□□ 0.62
SNX17-210ENST00000537606 GOLPH3Q9H4A6 298 aa18.95■□□□□ 0.62
SNX17-210ENST00000537606 C17orf75Q9HAS0 396 aa18.95■□□□□ 0.62
SNX17-210ENST00000537606 LOC285556D6RIA3 1793 aa18.94■□□□□ 0.62
SNX17-210ENST00000537606 ATP8B1O43520 1251 aa18.94■□□□□ 0.62
SNX17-210ENST00000537606 MARK3P27448 753 aa18.94■□□□□ 0.62
SNX17-210ENST00000537606 TCF7P36402 384 aaPredicted RBP18.94■□□□□ 0.62
SNX17-210ENST00000537606 RNF10Q8N5U6 811 aaKnown RBP18.94■□□□□ 0.62
SNX17-210ENST00000537606 LNX1Q8TBB1 728 aaPredicted RBP18.94■□□□□ 0.62
SNX17-210ENST00000537606 ASAP3Q8TDY4 903 aa18.94■□□□□ 0.62
SNX17-210ENST00000537606 TLR10Q9BXR5 811 aa18.94■□□□□ 0.62
SNX17-210ENST00000537606 MAF1Q9H063 256 aa18.94■□□□□ 0.62
SNX17-210ENST00000537606 A0A0G2JMZ2 1700 aa18.94■□□□□ 0.62
SNX17-210ENST00000537606 GLTPD2A6NH11 291 aa18.94■□□□□ 0.62
SNX17-210ENST00000537606 SOCS7O14512 581 aa18.94■□□□□ 0.62
SNX17-210ENST00000537606 MATR3P43243 847 aaKnown RBP eCLIP18.94■□□□□ 0.62
SNX17-210ENST00000537606 MXI1P50539 228 aa18.94■□□□□ 0.62
SNX17-210ENST00000537606 CKAP4Q07065 602 aaKnown RBP18.94■□□□□ 0.62
SNX17-210ENST00000537606 DMTNQ08495 405 aa18.94■□□□□ 0.62
SNX17-210ENST00000537606 SMC1AQ14683 1233 aaKnown RBP18.94■□□□□ 0.62
SNX17-210ENST00000537606 TMEM174Q8WUU8 243 aa18.94■□□□□ 0.62
SNX17-210ENST00000537606 HNRNPLLQ8WVV9 542 aaKnown RBP18.94■□□□□ 0.62
SNX17-210ENST00000537606 L1RE1Q9UN81 338 aa18.94■□□□□ 0.62
SNX17-210ENST00000537606 ARID2Q68CP9 1835 aa18.94■□□□□ 0.62
SNX17-210ENST00000537606 DLATP10515 647 aaKnown RBP18.93■□□□□ 0.62
SNX17-210ENST00000537606 OSBPP22059 807 aa18.93■□□□□ 0.62
SNX17-210ENST00000537606 STAT5BP51692 787 aa18.93■□□□□ 0.62
SNX17-210ENST00000537606 TUBB4BP68371 445 aa18.93■□□□□ 0.62
SNX17-210ENST00000537606 CETN1Q12798 172 aa18.93■□□□□ 0.62
SNX17-210ENST00000537606 KCTD2Q14681 263 aa18.93■□□□□ 0.62
SNX17-210ENST00000537606 EPC2Q52LR7 807 aa18.93■□□□□ 0.62
SNX17-210ENST00000537606 MAP1SQ66K74 1059 aaPredicted RBP18.93■□□□□ 0.62
SNX17-210ENST00000537606 TRIM50Q86XT4 487 aa18.93■□□□□ 0.62
SNX17-210ENST00000537606 MMP19Q99542 508 aa18.93■□□□□ 0.62
SNX17-210ENST00000537606 FAM213AQ9BRX8 229 aa18.93■□□□□ 0.62
SNX17-210ENST00000537606 SEPT11Q9NVA2 429 aaKnown RBP18.93■□□□□ 0.62
SNX17-210ENST00000537606 LRRIQ4A6NIV6 560 aa18.93■□□□□ 0.62
SNX17-210ENST00000537606 LRRIQ3A6PVS8 624 aaPredicted RBP18.93■□□□□ 0.62
SNX17-210ENST00000537606 MAP2K7O14733 419 aa18.93■□□□□ 0.62
SNX17-210ENST00000537606 SLC25A27O95847 323 aa18.93■□□□□ 0.62
SNX17-210ENST00000537606 NOP2P46087 812 aaKnown RBP18.93■□□□□ 0.62
SNX17-210ENST00000537606 SNRPFP62306 86 aaKnown RBP18.93■□□□□ 0.62
SNX17-210ENST00000537606 TERF2Q15554 542 aa18.93■□□□□ 0.62
SNX17-210ENST00000537606 HSDL1Q3SXM5 330 aa18.93■□□□□ 0.62
SNX17-210ENST00000537606 FASTKD5Q7L8L6 764 aaKnown RBP18.93■□□□□ 0.62
SNX17-210ENST00000537606 FBXO16Q8IX29 292 aaPredicted RBP18.93■□□□□ 0.62
SNX17-210ENST00000537606 GSPT2Q8IYD1 628 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms