RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 NECTIN4Q96NY8 510 aa21.97■■□□□ 1.11
TNFRSF1B-204ENST00000536782 MINDY3Q9H8M7 445 aa21.97■■□□□ 1.11
TNFRSF1B-204ENST00000536782 USP34Q70CQ2 3546 aa21.97■■□□□ 1.11
TNFRSF1B-204ENST00000536782 FAM205CA6NFA0 338 aa21.96■■□□□ 1.11
TNFRSF1B-204ENST00000536782 SP100P23497 879 aaPredicted RBP21.96■■□□□ 1.11
TNFRSF1B-204ENST00000536782 CYP4A11Q02928 519 aa21.96■■□□□ 1.11
TNFRSF1B-204ENST00000536782 NR5A1Q13285 461 aa21.96■■□□□ 1.11
TNFRSF1B-204ENST00000536782 AGMOQ6ZNB7 445 aa21.96■■□□□ 1.11
TNFRSF1B-204ENST00000536782 FERMT3Q86UX7 667 aa21.96■■□□□ 1.11
TNFRSF1B-204ENST00000536782 TPH2Q8IWU9 490 aa21.96■■□□□ 1.11
TNFRSF1B-204ENST00000536782 SUGP1Q8IWZ8 645 aaKnown RBP21.96■■□□□ 1.11
TNFRSF1B-204ENST00000536782 RNF149Q8NC42 400 aa21.96■■□□□ 1.11
TNFRSF1B-204ENST00000536782 BCL7CQ8WUZ0 217 aaPredicted RBP21.96■■□□□ 1.11
TNFRSF1B-204ENST00000536782 RSAD1Q9HA92 442 aa21.96■■□□□ 1.11
TNFRSF1B-204ENST00000536782 TSHZ2Q9NRE2 1034 aa21.96■■□□□ 1.11
TNFRSF1B-204ENST00000536782 KANSL3Q9P2N6 904 aa21.96■■□□□ 1.11
TNFRSF1B-204ENST00000536782 DNAJB4Q9UDY4 337 aa21.96■■□□□ 1.11
TNFRSF1B-204ENST00000536782 CDH22Q9UJ99 828 aa21.96■■□□□ 1.11
TNFRSF1B-204ENST00000536782 FDPSP14324 419 aaKnown RBP21.95■■□□□ 1.1
TNFRSF1B-204ENST00000536782 HOXA11P31270 313 aaPredicted RBP21.95■■□□□ 1.1
TNFRSF1B-204ENST00000536782 SLC11A1P49279 550 aa21.95■■□□□ 1.1
TNFRSF1B-204ENST00000536782 MRE11P49959 708 aa21.95■■□□□ 1.1
TNFRSF1B-204ENST00000536782 ZBTB33Q86T24 672 aa21.95■■□□□ 1.1
TNFRSF1B-204ENST00000536782 ZNF280BQ86YH2 543 aa21.95■■□□□ 1.1
TNFRSF1B-204ENST00000536782 RIPOR3Q96MK2 946 aa21.95■■□□□ 1.1
TNFRSF1B-204ENST00000536782 MTRQ99707 1265 aa21.95■■□□□ 1.1
TNFRSF1B-204ENST00000536782 DZANK1Q9NVP4 752 aa21.95■■□□□ 1.1
TNFRSF1B-204ENST00000536782 STK39Q9UEW8 545 aa21.95■■□□□ 1.1
TNFRSF1B-204ENST00000536782 CNTNAP2Q9UHC6 1331 aa21.95■■□□□ 1.1
TNFRSF1B-204ENST00000536782 ZBTB39O15060 712 aa21.94■■□□□ 1.1
TNFRSF1B-204ENST00000536782 ERLIN2O94905 339 aa21.94■■□□□ 1.1
TNFRSF1B-204ENST00000536782 SLITRK3O94933 977 aa21.94■■□□□ 1.1
TNFRSF1B-204ENST00000536782 MTHFRP42898 656 aa21.94■■□□□ 1.1
TNFRSF1B-204ENST00000536782 UBXN11Q5T124 520 aa21.94■■□□□ 1.1
TNFRSF1B-204ENST00000536782 IER5LQ5T953 404 aa21.94■■□□□ 1.1
TNFRSF1B-204ENST00000536782 FBXL6Q8N531 539 aa21.94■■□□□ 1.1
TNFRSF1B-204ENST00000536782 NECAB1Q8N987 351 aa21.94■■□□□ 1.1
TNFRSF1B-204ENST00000536782 TNFRSF25Q93038 417 aa21.94■■□□□ 1.1
TNFRSF1B-204ENST00000536782 FAM193BQ96PV7 902 aaPredicted RBP21.94■■□□□ 1.1
TNFRSF1B-204ENST00000536782 POMKQ9H5K3 350 aa21.94■■□□□ 1.1
TNFRSF1B-204ENST00000536782 PCDHA12Q9UN75 941 aa21.94■■□□□ 1.1
TNFRSF1B-204ENST00000536782 B4GALT3O60512 393 aa21.93■■□□□ 1.1
TNFRSF1B-204ENST00000536782 DDHD2O94830 711 aa21.93■■□□□ 1.1
TNFRSF1B-204ENST00000536782 ALDH2P05091 517 aa21.93■■□□□ 1.1
TNFRSF1B-204ENST00000536782 EPCAMP16422 314 aa21.93■■□□□ 1.1
TNFRSF1B-204ENST00000536782 NCLP19338 710 aaKnown RBP21.93■■□□□ 1.1
TNFRSF1B-204ENST00000536782 MXD4Q14582 209 aaPredicted RBP21.93■■□□□ 1.1
TNFRSF1B-204ENST00000536782 PCBP1Q15365 356 aaKnown RBP eCLIP21.93■■□□□ 1.1
TNFRSF1B-204ENST00000536782 ME3Q16798 604 aa21.93■■□□□ 1.1
TNFRSF1B-204ENST00000536782 RARS2Q5T160 578 aaKnown RBP21.93■■□□□ 1.1
TNFRSF1B-204ENST00000536782 CNNM3Q8NE01 707 aa21.93■■□□□ 1.1
TNFRSF1B-204ENST00000536782 PRSS33Q8NF86 280 aa21.93■■□□□ 1.1
TNFRSF1B-204ENST00000536782 GTF3C6Q969F1 213 aa21.93■■□□□ 1.1
TNFRSF1B-204ENST00000536782 ASIC4Q96FT7 647 aa21.93■■□□□ 1.1
TNFRSF1B-204ENST00000536782 EIF2AK1Q9BQI3 630 aaKnown RBP21.93■■□□□ 1.1
TNFRSF1B-204ENST00000536782 TMEM175Q9BSA9 504 aa21.93■■□□□ 1.1
TNFRSF1B-204ENST00000536782 UBN1Q9NPG3 1134 aa21.93■■□□□ 1.1
TNFRSF1B-204ENST00000536782 TFDP1Q14186 410 aa21.92■■□□□ 1.1
TNFRSF1B-204ENST00000536782 PTPN14Q15678 1187 aa21.92■■□□□ 1.1
TNFRSF1B-204ENST00000536782 CALCRLQ16602 461 aa21.92■■□□□ 1.1
TNFRSF1B-204ENST00000536782 ATAT1Q5SQI0 421 aa21.92■■□□□ 1.1
TNFRSF1B-204ENST00000536782 PPFIBP1Q86W92 1011 aa21.92■■□□□ 1.1
TNFRSF1B-204ENST00000536782 C12orf76Q8N812 135 aaPredicted RBP21.92■■□□□ 1.1
TNFRSF1B-204ENST00000536782 SLC22A17Q8WUG5 538 aa21.92■■□□□ 1.1
TNFRSF1B-204ENST00000536782 PHOX2BQ99453 314 aa21.92■■□□□ 1.1
TNFRSF1B-204ENST00000536782 PRRX2Q99811 253 aa21.92■■□□□ 1.1
TNFRSF1B-204ENST00000536782 HSD17B14Q9BPX1 270 aa21.92■■□□□ 1.1
TNFRSF1B-204ENST00000536782 VN1R3Q9BXE9 311 aa21.92■■□□□ 1.1
TNFRSF1B-204ENST00000536782 XPNPEP1Q9NQW7 623 aa21.92■■□□□ 1.1
TNFRSF1B-204ENST00000536782 FAN1Q9Y2M0 1017 aa21.92■■□□□ 1.1
TNFRSF1B-204ENST00000536782 C2CD4DB7Z1M9 353 aa21.91■■□□□ 1.1
TNFRSF1B-204ENST00000536782 LYPLA2O95372 231 aa21.91■■□□□ 1.1
TNFRSF1B-204ENST00000536782 LARGE1O95461 756 aa21.91■■□□□ 1.1
TNFRSF1B-204ENST00000536782 POMCP01189 267 aa21.91■■□□□ 1.1
TNFRSF1B-204ENST00000536782 WEE2P0C1S8 567 aa21.91■■□□□ 1.1
TNFRSF1B-204ENST00000536782 ITGA4P13612 1032 aa21.91■■□□□ 1.1
TNFRSF1B-204ENST00000536782 AXLP30530 894 aa21.91■■□□□ 1.1
TNFRSF1B-204ENST00000536782 AFF1P51825 1210 aaKnown RBP21.91■■□□□ 1.1
TNFRSF1B-204ENST00000536782 PTENP60484 403 aa21.91■■□□□ 1.1
TNFRSF1B-204ENST00000536782 NCBP1Q09161 790 aaKnown RBP21.91■■□□□ 1.1
TNFRSF1B-204ENST00000536782 CABP7Q86V35 215 aa21.91■■□□□ 1.1
TNFRSF1B-204ENST00000536782 SMG8Q8ND04 991 aaKnown RBP21.91■■□□□ 1.1
TNFRSF1B-204ENST00000536782 EMILIN2Q9BXX0 1053 aa21.91■■□□□ 1.1
TNFRSF1B-204ENST00000536782 TTC12Q9H892 705 aaPredicted RBP21.91■■□□□ 1.1
TNFRSF1B-204ENST00000536782 ANKEF1Q9NU02 776 aa21.91■■□□□ 1.1
TNFRSF1B-204ENST00000536782 PPP4R2Q9NY27 417 aa21.91■■□□□ 1.1
TNFRSF1B-204ENST00000536782 BTBD18B2RXH4 712 aa21.9■■□□□ 1.1
TNFRSF1B-204ENST00000536782 NRP1O14786 923 aa21.9■■□□□ 1.1
TNFRSF1B-204ENST00000536782 TSPAN1O60635 241 aa21.9■■□□□ 1.1
TNFRSF1B-204ENST00000536782 DGAT1O75907 488 aa21.9■■□□□ 1.1
TNFRSF1B-204ENST00000536782 POU5F1BQ06416 359 aa21.9■■□□□ 1.1
TNFRSF1B-204ENST00000536782 TRIM29Q14134 588 aa21.9■■□□□ 1.1
TNFRSF1B-204ENST00000536782 KIAA1841Q6NSI8 718 aa21.9■■□□□ 1.1
TNFRSF1B-204ENST00000536782 NOTUMQ6P988 496 aa21.9■■□□□ 1.1
TNFRSF1B-204ENST00000536782 KREMEN2Q8NCW0 462 aa21.9■■□□□ 1.1
TNFRSF1B-204ENST00000536782 NSUN7Q8NE18 718 aaKnown RBP21.9■■□□□ 1.1
TNFRSF1B-204ENST00000536782 CCDC51Q96ER9 411 aa21.9■■□□□ 1.1
TNFRSF1B-204ENST00000536782 CCDC43Q96MW1 224 aaKnown RBP21.9■■□□□ 1.1
TNFRSF1B-204ENST00000536782 DBR1Q9UK59 544 aaKnown RBP21.9■■□□□ 1.1
TNFRSF1B-204ENST00000536782 SORCS3Q9UPU3 1222 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms