RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 XRCC6P12956 609 aaKnown RBP eCLIP9.84□□□□□ -0.83
CHD4-204ENST00000535810 LAG3P18627 525 aa9.84□□□□□ -0.83
CHD4-204ENST00000535810 KCNA5P22460 613 aa9.84□□□□□ -0.83
CHD4-204ENST00000535810 GJB2P29033 226 aa9.84□□□□□ -0.83
CHD4-204ENST00000535810 PHKA2P46019 1235 aa9.84□□□□□ -0.83
CHD4-204ENST00000535810 MXD4Q14582 209 aaPredicted RBP9.84□□□□□ -0.83
CHD4-204ENST00000535810 TWF2Q6IBS0 349 aaKnown RBP9.84□□□□□ -0.83
CHD4-204ENST00000535810 POTEGQ6S5H5 508 aa9.84□□□□□ -0.83
CHD4-204ENST00000535810 LRRC55Q6ZSA7 311 aa9.84□□□□□ -0.83
CHD4-204ENST00000535810 SRGAP1Q7Z6B7 1085 aa9.84□□□□□ -0.83
CHD4-204ENST00000535810 ABI1Q8IZP0 508 aa9.84□□□□□ -0.83
CHD4-204ENST00000535810 C4orf32Q8N8J7 132 aa9.84□□□□□ -0.83
CHD4-204ENST00000535810 COLGALT1Q8NBJ5 622 aa9.84□□□□□ -0.83
CHD4-204ENST00000535810 SPPL3Q8TCT6 385 aa9.84□□□□□ -0.83
CHD4-204ENST00000535810 HELQQ8TDG4 1101 aa9.84□□□□□ -0.83
CHD4-204ENST00000535810 ASAP3Q8TDY4 903 aa9.84□□□□□ -0.83
CHD4-204ENST00000535810 CCDC43Q96MW1 224 aaKnown RBP9.84□□□□□ -0.83
CHD4-204ENST00000535810 POLR3CQ9BUI4 534 aaPredicted RBP9.84□□□□□ -0.83
CHD4-204ENST00000535810 CWH43Q9H720 699 aa9.84□□□□□ -0.83
CHD4-204ENST00000535810 TUFT1Q9NNX1 390 aa9.84□□□□□ -0.83
CHD4-204ENST00000535810 AAASQ9NRG9 546 aa9.84□□□□□ -0.83
CHD4-204ENST00000535810 PCDHB6Q9Y5E3 794 aa9.84□□□□□ -0.83
CHD4-204ENST00000535810 PCDHB12Q9Y5F1 795 aa9.84□□□□□ -0.83
CHD4-204ENST00000535810 TCF20Q9UGU0 1960 aaKnown RBP9.83□□□□□ -0.84
CHD4-204ENST00000535810 USO1O60763 962 aaKnown RBP9.83□□□□□ -0.84
CHD4-204ENST00000535810 FGF18O76093 207 aa9.83□□□□□ -0.84
CHD4-204ENST00000535810 RPA1P27694 616 aa9.83□□□□□ -0.84
CHD4-204ENST00000535810 HOXA11P31270 313 aaPredicted RBP9.83□□□□□ -0.84
CHD4-204ENST00000535810 IRS1P35568 1242 aa9.83□□□□□ -0.84
CHD4-204ENST00000535810 ARL2P36404 184 aa9.83□□□□□ -0.84
CHD4-204ENST00000535810 RAB27AP51159 221 aa9.83□□□□□ -0.84
CHD4-204ENST00000535810 PTENP60484 403 aa9.83□□□□□ -0.84
CHD4-204ENST00000535810 NHLH1Q02575 133 aa9.83□□□□□ -0.84
CHD4-204ENST00000535810 HYAL1Q12794 435 aa9.83□□□□□ -0.84
CHD4-204ENST00000535810 PTGDRQ13258 359 aa9.83□□□□□ -0.84
CHD4-204ENST00000535810 CAPSQ13938 189 aa9.83□□□□□ -0.84
CHD4-204ENST00000535810 CSPP1Q1MSJ5 1256 aa9.83□□□□□ -0.84
CHD4-204ENST00000535810 LEXMQ3ZCV2 418 aa9.83□□□□□ -0.84
CHD4-204ENST00000535810 SPOUT1Q5T280 376 aaKnown RBP9.83□□□□□ -0.84
CHD4-204ENST00000535810 HAUS3Q68CZ6 603 aa9.83□□□□□ -0.84
CHD4-204ENST00000535810 ERMNQ8TAM6 284 aa9.83□□□□□ -0.84
CHD4-204ENST00000535810 POF1BQ8WVV4 589 aa9.83□□□□□ -0.84
CHD4-204ENST00000535810 LPPQ93052 612 aa9.83□□□□□ -0.84
CHD4-204ENST00000535810 PABPC5Q96DU9 382 aaKnown RBP9.83□□□□□ -0.84
CHD4-204ENST00000535810 NACC1Q96RE7 527 aa9.83□□□□□ -0.84
CHD4-204ENST00000535810 POLR3FQ9H1D9 316 aaPredicted RBP9.83□□□□□ -0.84
CHD4-204ENST00000535810 FAM105AQ9NUU6 356 aa9.83□□□□□ -0.84
CHD4-204ENST00000535810 USP34Q70CQ2 3546 aa9.83□□□□□ -0.84
CHD4-204ENST00000535810 MEIS3P2A8K0S8 358 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 H3BQ06 376 aaPredicted RBP9.82□□□□□ -0.84
CHD4-204ENST00000535810 LAD1O00515 517 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 TSPAN1O60635 241 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 ZNF623O75123 536 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 SKIP12755 728 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 GLRA2P23416 452 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 PBX3P40426 434 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 UBE3AQ05086 875 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 MBTD1Q05BQ5 628 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 POU5F1BQ06416 359 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 TFDP1Q14186 410 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 PCBP1Q15365 356 aaKnown RBP eCLIP9.82□□□□□ -0.84
CHD4-204ENST00000535810 CTC1Q2NKJ3 1217 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 RILPL1Q5EBL4 403 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 UBXN11Q5T124 520 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 MCTP1Q6DN14 999 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 ADGRD2Q7Z7M1 963 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 THNSL1Q8IYQ7 743 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 IGSF22Q8N9C0 903 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 RSPH1Q8WYR4 309 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 MRPL9Q9BYD2 267 aaKnown RBP9.82□□□□□ -0.84
CHD4-204ENST00000535810 NFKBIZQ9BYH8 718 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 BACH2Q9BYV9 841 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 GPRC5CQ9NQ84 441 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.82□□□□□ -0.84
CHD4-204ENST00000535810 CLDND1Q9NY35 253 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 LRWD1Q9UFC0 647 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 DBR1Q9UK59 544 aaKnown RBP9.82□□□□□ -0.84
CHD4-204ENST00000535810 SMC3Q9UQE7 1217 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 PCDHB2Q9Y5E7 798 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 PCDHGC5Q9Y5F6 944 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 PCDHGA10Q9Y5H3 936 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 PLXNA4Q9HCM2 1894 aa9.82□□□□□ -0.84
CHD4-204ENST00000535810 H3BQV1 296 aa9.81□□□□□ -0.84
CHD4-204ENST00000535810 INO80B-WBP1J3KQ70 363 aa9.81□□□□□ -0.84
CHD4-204ENST00000535810 NCK2O43639 380 aa9.81□□□□□ -0.84
CHD4-204ENST00000535810 ERLIN2O94905 339 aa9.81□□□□□ -0.84
CHD4-204ENST00000535810 MUTP22033 750 aa9.81□□□□□ -0.84
CHD4-204ENST00000535810 GTF2F1P35269 517 aaKnown RBP eCLIP9.81□□□□□ -0.84
CHD4-204ENST00000535810 PPM1AP35813 382 aa9.81□□□□□ -0.84
CHD4-204ENST00000535810 LTBRP36941 435 aa9.81□□□□□ -0.84
CHD4-204ENST00000535810 CCT6AP40227 531 aaKnown RBP9.81□□□□□ -0.84
CHD4-204ENST00000535810 PRPHP41219 470 aa9.81□□□□□ -0.84
CHD4-204ENST00000535810 PLCB3Q01970 1234 aa9.81□□□□□ -0.84
CHD4-204ENST00000535810 IL17AQ16552 155 aa9.81□□□□□ -0.84
CHD4-204ENST00000535810 ECM1Q16610 540 aa9.81□□□□□ -0.84
CHD4-204ENST00000535810 AMHR2Q16671 573 aa9.81□□□□□ -0.84
CHD4-204ENST00000535810 LONRF3Q496Y0 759 aa9.81□□□□□ -0.84
CHD4-204ENST00000535810 PADI6Q6TGC4 694 aa9.81□□□□□ -0.84
CHD4-204ENST00000535810 KCNT2Q6UVM3 1135 aa9.81□□□□□ -0.84
CHD4-204ENST00000535810 GLB1LQ6UWU2 654 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms