RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 NPR3P17342 541 aa11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 KRT2P35908 639 aa11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 NEK4P51957 841 aa11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 NPEPPSP55786 919 aa11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 PLCB3Q01970 1234 aa11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 RSPO4Q2I0M5 234 aaPredicted RBP11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 CLLU1OSQ5K130 101 aa11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 RARS2Q5T160 578 aaKnown RBP11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 PLA2G4FQ68DD2 849 aa11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 TMC7Q7Z402 723 aa11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 POTEDQ86YR6 584 aa11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 ZDHHC14Q8IZN3 488 aa11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 PLCD3Q8N3E9 789 aa11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 ZNF579Q8NAF0 562 aaKnown RBP11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 NLRP7Q8WX94 980 aa11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 MRPS27Q92552 414 aaKnown RBP11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 FDXACB1Q9BRP7 624 aaPredicted RBP11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 GCOM2Q9BZD3 368 aaPredicted RBP11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 DHX33Q9H6R0 707 aaKnown RBP11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 IFT122Q9HBG6 1241 aa11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 NGRNQ9NPE2 291 aaKnown RBP11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 CYP26B1Q9NR63 512 aa11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 LZTS1Q9Y250 596 aa11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 HCFC2Q9Y5Z7 792 aa11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 BTBD18B2RXH4 712 aa11.26□□□□□ -0.61
CLSTN3-203ENST00000534830 WNT7AO00755 349 aa11.26□□□□□ -0.61
CLSTN3-203ENST00000534830 DKC1O60832 514 aaKnown RBP eCLIP11.26□□□□□ -0.61
CLSTN3-203ENST00000534830 SLITRK3O94933 977 aa11.26□□□□□ -0.61
CLSTN3-203ENST00000534830 LAG3P18627 525 aa11.26□□□□□ -0.61
CLSTN3-203ENST00000534830 RFX1P22670 979 aa11.26□□□□□ -0.61
CLSTN3-203ENST00000534830 CA8P35219 290 aa11.26□□□□□ -0.61
CLSTN3-203ENST00000534830 DNM2P50570 870 aa11.26□□□□□ -0.61
CLSTN3-203ENST00000534830 SLFN12Q8IYM2 578 aa11.26□□□□□ -0.61
CLSTN3-203ENST00000534830 SIX5Q8N196 739 aa11.26□□□□□ -0.61
CLSTN3-203ENST00000534830 DCLK2Q8N568 766 aa11.26□□□□□ -0.61
CLSTN3-203ENST00000534830 C12orf76Q8N812 135 aaPredicted RBP11.26□□□□□ -0.61
CLSTN3-203ENST00000534830 RIN2Q8WYP3 895 aaPredicted RBP11.26□□□□□ -0.61
CLSTN3-203ENST00000534830 RUBCNQ92622 972 aa11.26□□□□□ -0.61
CLSTN3-203ENST00000534830 JPH2Q9BR39 696 aaPredicted RBP11.26□□□□□ -0.61
CLSTN3-203ENST00000534830 INO80BQ9C086 356 aaPredicted RBP11.26□□□□□ -0.61
CLSTN3-203ENST00000534830 DACT1Q9NYF0 836 aa11.26□□□□□ -0.61
CLSTN3-203ENST00000534830 RGL1Q9NZL6 768 aa11.26□□□□□ -0.61
CLSTN3-203ENST00000534830 SUCLA2Q9P2R7 463 aaPredicted RBP11.26□□□□□ -0.61
CLSTN3-203ENST00000534830 OTOGLQ3ZCN5 2332 aa11.25□□□□□ -0.61
CLSTN3-203ENST00000534830 ZBTB39O15060 712 aa11.25□□□□□ -0.61
CLSTN3-203ENST00000534830 JAK2O60674 1132 aa11.25□□□□□ -0.61
CLSTN3-203ENST00000534830 ZNF623O75123 536 aa11.25□□□□□ -0.61
CLSTN3-203ENST00000534830 LYPLA2O95372 231 aa11.25□□□□□ -0.61
CLSTN3-203ENST00000534830 YWHABP31946 246 aaKnown RBP11.25□□□□□ -0.61
CLSTN3-203ENST00000534830 PHKA2P46019 1235 aa11.25□□□□□ -0.61
CLSTN3-203ENST00000534830 KRT17Q04695 432 aa11.25□□□□□ -0.61
CLSTN3-203ENST00000534830 TDGQ13569 410 aa11.25□□□□□ -0.61
CLSTN3-203ENST00000534830 ST3GAL2Q16842 350 aa11.25□□□□□ -0.61
CLSTN3-203ENST00000534830 ATAT1Q5SQI0 421 aa11.25□□□□□ -0.61
CLSTN3-203ENST00000534830 KANK3Q6NY19 840 aa11.25□□□□□ -0.61
CLSTN3-203ENST00000534830 ZC3H14Q6PJT7 736 aaKnown RBP11.25□□□□□ -0.61
CLSTN3-203ENST00000534830 KCNT2Q6UVM3 1135 aa11.25□□□□□ -0.61
CLSTN3-203ENST00000534830 RHPN2Q8IUC4 686 aa11.25□□□□□ -0.61
CLSTN3-203ENST00000534830 KSR1Q8IVT5 923 aa11.25□□□□□ -0.61
CLSTN3-203ENST00000534830 EXOC8Q8IYI6 725 aa11.25□□□□□ -0.61
CLSTN3-203ENST00000534830 DYDC2Q96IM9 177 aa11.25□□□□□ -0.61
CLSTN3-203ENST00000534830 CEP170P1Q96L14 293 aa11.25□□□□□ -0.61
CLSTN3-203ENST00000534830 MTMR9Q96QG7 549 aa11.25□□□□□ -0.61
CLSTN3-203ENST00000534830 HSD17B14Q9BPX1 270 aa11.25□□□□□ -0.61
CLSTN3-203ENST00000534830 LXNQ9BS40 222 aa11.25□□□□□ -0.61
CLSTN3-203ENST00000534830 ZFHX4Q86UP3 3567 aa11.25□□□□□ -0.61
CLSTN3-203ENST00000534830 MAP1BP46821 2468 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-203ENST00000534830 CFAP47Q6ZTR5 3102 aa11.24□□□□□ -0.61
CLSTN3-203ENST00000534830 GAS2O43903 313 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-203ENST00000534830 BAG4O95429 457 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-203ENST00000534830 SFPQP23246 707 aaKnown RBP eCLIP11.24□□□□□ -0.61
CLSTN3-203ENST00000534830 PBX3P40426 434 aa11.24□□□□□ -0.61
CLSTN3-203ENST00000534830 RFC5P40937 340 aa11.24□□□□□ -0.61
CLSTN3-203ENST00000534830 CTTNQ14247 550 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-203ENST00000534830 SMC1AQ14683 1233 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-203ENST00000534830 KIAA1841Q6NSI8 718 aa11.24□□□□□ -0.61
CLSTN3-203ENST00000534830 DIS3L2Q8IYB7 885 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-203ENST00000534830 LRRC43Q8N309 656 aa11.24□□□□□ -0.61
CLSTN3-203ENST00000534830 TMEM87AQ8NBN3 555 aa11.24□□□□□ -0.61
CLSTN3-203ENST00000534830 PRPF31Q8WWY3 499 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-203ENST00000534830 RSPH1Q8WYR4 309 aa11.24□□□□□ -0.61
CLSTN3-203ENST00000534830 KIF2CQ99661 725 aa11.24□□□□□ -0.61
CLSTN3-203ENST00000534830 EIF2AK1Q9BQI3 630 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-203ENST00000534830 ZSWIM4Q9H7M6 989 aa11.24□□□□□ -0.61
CLSTN3-203ENST00000534830 MINDY3Q9H8M7 445 aa11.24□□□□□ -0.61
CLSTN3-203ENST00000534830 BRMS1Q9HCU9 246 aa11.24□□□□□ -0.61
CLSTN3-203ENST00000534830 USTQ9Y2C2 406 aa11.24□□□□□ -0.61
CLSTN3-203ENST00000534830 COL4A3BPQ9Y5P4 624 aa11.24□□□□□ -0.61
CLSTN3-203ENST00000534830 C2orf71A6NGG8 1288 aa11.23□□□□□ -0.61
CLSTN3-203ENST00000534830 ASAP2O43150 1006 aa11.23□□□□□ -0.61
CLSTN3-203ENST00000534830 CLASP2O75122 1294 aaKnown RBP11.23□□□□□ -0.61
CLSTN3-203ENST00000534830 SKIP12755 728 aa11.23□□□□□ -0.61
CLSTN3-203ENST00000534830 HOXA11P31270 313 aaPredicted RBP11.23□□□□□ -0.61
CLSTN3-203ENST00000534830 LAMTOR4Q0VGL1 99 aa11.23□□□□□ -0.61
CLSTN3-203ENST00000534830 NCAPH2Q6IBW4 605 aa11.23□□□□□ -0.61
CLSTN3-203ENST00000534830 OTUD6AQ7L8S5 288 aa11.23□□□□□ -0.61
CLSTN3-203ENST00000534830 SRGAP1Q7Z6B7 1085 aa11.23□□□□□ -0.61
CLSTN3-203ENST00000534830 SLC39A11Q8N1S5 342 aa11.23□□□□□ -0.61
CLSTN3-203ENST00000534830 MRPL43Q8N983 215 aaKnown RBP11.23□□□□□ -0.61
CLSTN3-203ENST00000534830 HELQQ8TDG4 1101 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms