RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 ZNF365Q70YC5 407 aa11.06□□□□□ -0.64
LDLRAD3-206ENST00000534091 SERINC5Q86VE9 423 aa11.06□□□□□ -0.64
LDLRAD3-206ENST00000534091 VSTM4Q8IW00 320 aa11.06□□□□□ -0.64
LDLRAD3-206ENST00000534091 EXOC8Q8IYI6 725 aa11.06□□□□□ -0.64
LDLRAD3-206ENST00000534091 ATP8B4Q8TF62 1192 aa11.06□□□□□ -0.64
LDLRAD3-206ENST00000534091 TMEM174Q8WUU8 243 aa11.06□□□□□ -0.64
LDLRAD3-206ENST00000534091 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.06□□□□□ -0.64
LDLRAD3-206ENST00000534091 WNT8AQ9H1J5 351 aa11.06□□□□□ -0.64
LDLRAD3-206ENST00000534091 DHX33Q9H6R0 707 aaKnown RBP11.06□□□□□ -0.64
LDLRAD3-206ENST00000534091 XPNPEP1Q9NQW7 623 aa11.06□□□□□ -0.64
LDLRAD3-206ENST00000534091 INTS13Q9NVM9 706 aa11.06□□□□□ -0.64
LDLRAD3-206ENST00000534091 TBC1D7Q9P0N9 293 aa11.06□□□□□ -0.64
LDLRAD3-206ENST00000534091 MAGEC2Q9UBF1 373 aaPredicted RBP11.06□□□□□ -0.64
LDLRAD3-206ENST00000534091 PCDHB13Q9Y5F0 798 aa11.06□□□□□ -0.64
LDLRAD3-206ENST00000534091 TMEM150BA6NC51 233 aa11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 SOX1O00570 391 aaPredicted RBP11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 CALUO43852 315 aaPredicted RBP11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 SORBS3O60504 671 aa11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 PRPF6O94906 941 aaKnown RBP11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 GCNT3O95395 438 aa11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 GNA14O95837 355 aa11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 CXCL10P02778 98 aa11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 SMIM10L2AP0DMW4 78 aa11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 SMIM10L2BP0DMW5 78 aa11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 MYBP10242 640 aa11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 HOXD13P35453 343 aa11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 PBX1P40424 430 aa11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 COPB1P53618 953 aaKnown RBP11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 EPHB4P54760 987 aa11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 GSDMDP57764 484 aa11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 ADAM17P78536 824 aa11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 GTF2BQ00403 316 aa11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 DMP1Q13316 513 aaPredicted RBP11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 MYBPC2Q14324 1141 aa11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 EMC2Q15006 297 aa11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 LRRC8DQ7L1W4 858 aa11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 C16orf59Q7L2K0 433 aa11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 FILIP1Q7Z7B0 1213 aa11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 GOLGA5Q8TBA6 731 aa11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 PHOSPHO2Q8TCD6 241 aa11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 CNOT6LQ96LI5 555 aaKnown RBP11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 NAP1L5Q96NT1 182 aaPredicted RBP11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 NTPCRQ9BSD7 190 aaKnown RBP11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 TMEM206Q9H813 350 aa11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 CGNQ9P2M7 1197 aaKnown RBP11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 ITIH6Q6UXX5 1313 aa11.05□□□□□ -0.64
LDLRAD3-206ENST00000534091 COL1A2P08123 1366 aa11.04□□□□□ -0.64
LDLRAD3-206ENST00000534091 ZMYM2Q9UBW7 1377 aa11.04□□□□□ -0.64
LDLRAD3-206ENST00000534091 SFI1A8K8P3 1242 aa11.04□□□□□ -0.64
LDLRAD3-206ENST00000534091 LGALS16A8MUM7 142 aa11.04□□□□□ -0.64
LDLRAD3-206ENST00000534091 H0YCG3 227 aa11.04□□□□□ -0.64
LDLRAD3-206ENST00000534091 K7ENM7 598 aa11.04□□□□□ -0.64
LDLRAD3-206ENST00000534091 HBP1O60381 514 aa11.04□□□□□ -0.64
LDLRAD3-206ENST00000534091 PTMAP06454 111 aaKnown RBP11.04□□□□□ -0.64
LDLRAD3-206ENST00000534091 CKBP12277 381 aa11.04□□□□□ -0.64
LDLRAD3-206ENST00000534091 NMT1P30419 496 aaKnown RBP11.04□□□□□ -0.64
LDLRAD3-206ENST00000534091 SMTNP53814 917 aa11.04□□□□□ -0.64
LDLRAD3-206ENST00000534091 POLGP54098 1239 aaPredicted RBP11.04□□□□□ -0.64
LDLRAD3-206ENST00000534091 CCL23P55773 120 aa11.04□□□□□ -0.64
LDLRAD3-206ENST00000534091 PLCB4Q15147 1175 aa11.04□□□□□ -0.64
LDLRAD3-206ENST00000534091 RAB30Q15771 203 aa11.04□□□□□ -0.64
LDLRAD3-206ENST00000534091 TRIM71Q2Q1W2 868 aaKnown RBP11.04□□□□□ -0.64
LDLRAD3-206ENST00000534091 MTERF2Q49AM1 385 aa11.04□□□□□ -0.64
LDLRAD3-206ENST00000534091 ZNF697Q5TEC3 545 aa11.04□□□□□ -0.64
LDLRAD3-206ENST00000534091 NELFCDQ8IXH7 590 aa11.04□□□□□ -0.64
LDLRAD3-206ENST00000534091 C12orf56Q8IXR9 622 aa11.04□□□□□ -0.64
LDLRAD3-206ENST00000534091 DRC7Q8IY82 874 aa11.04□□□□□ -0.64
LDLRAD3-206ENST00000534091 LRCH3Q96II8 777 aa11.04□□□□□ -0.64
LDLRAD3-206ENST00000534091 JPH2Q9BR39 696 aaPredicted RBP11.04□□□□□ -0.64
LDLRAD3-206ENST00000534091 RNPEPQ9H4A4 650 aa11.04□□□□□ -0.64
LDLRAD3-206ENST00000534091 UMODL1Q5DID0 1318 aa11.04□□□□□ -0.64
LDLRAD3-206ENST00000534091 RANBP2P49792 3224 aaKnown RBP11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 IGKV6-21A0A0C4DH24 114 aa11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 A0A1W2PQC6 194 aa11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 MBLAC1A4D2B0 266 aaPredicted RBP11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 CETN3O15182 167 aa11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 SLC16A3O15427 465 aaKnown RBP11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 MAFO75444 373 aaPredicted RBP11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 TPM2P07951 284 aa11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 RPL13P26373 211 aaKnown RBP11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 ARL2P36404 184 aa11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 CHMP4BP1P59074 171 aa11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 PPP2R5AQ15172 486 aa11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 MAN2A1Q16706 1144 aa11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 HSP90AA4PQ58FG1 418 aa11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 FAM102BQ5T8I3 360 aa11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 CNKSR3Q6P9H4 555 aa11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 HS2ST1Q7LGA3 356 aa11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 TMC6Q7Z403 805 aa11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 RSPH3Q86UC2 560 aa11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 SLC9A9Q8IVB4 645 aa11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 ZNF710Q8N1W2 664 aa11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 SPC24Q8NBT2 197 aa11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 SLC7A3Q8WY07 619 aa11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 DHX38Q92620 1227 aaKnown RBP11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 GLG1Q92896 1179 aa11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 ACCSQ96QU6 501 aa11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 SLC9A7Q96T83 725 aa11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 MKNK1Q9BUB5 465 aa11.03□□□□□ -0.64
LDLRAD3-206ENST00000534091 GBP3Q9H0R5 595 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms