RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 CCDC144CPQ8IYA2 1237 aa8.76□□□□□ -1.01
CASP4-212ENST00000533730 SYNPOQ8N3V7 929 aa8.76□□□□□ -1.01
CASP4-212ENST00000533730 ZNF713Q8N859 430 aaPredicted RBP8.76□□□□□ -1.01
CASP4-212ENST00000533730 NPLOC4Q8TAT6 608 aa8.76□□□□□ -1.01
CASP4-212ENST00000533730 CLEC4DQ8WXI8 215 aa8.76□□□□□ -1.01
CASP4-212ENST00000533730 TRIB2Q92519 343 aa8.76□□□□□ -1.01
CASP4-212ENST00000533730 ZNF274Q96GC6 653 aaPredicted RBP8.76□□□□□ -1.01
CASP4-212ENST00000533730 MAML3Q96JK9 1138 aa8.76□□□□□ -1.01
CASP4-212ENST00000533730 PIGSQ96S52 555 aa8.76□□□□□ -1.01
CASP4-212ENST00000533730 PLVAPQ9BX97 442 aa8.76□□□□□ -1.01
CASP4-212ENST00000533730 C22orf23Q9BZE7 217 aa8.76□□□□□ -1.01
CASP4-212ENST00000533730 CYP39A1Q9NYL5 469 aa8.76□□□□□ -1.01
CASP4-212ENST00000533730 TRIM33Q9UPN9 1127 aa8.76□□□□□ -1.01
CASP4-212ENST00000533730 PCDHA1Q9Y5I3 950 aa8.76□□□□□ -1.01
CASP4-212ENST00000533730 SYNGAP1Q96PV0 1343 aa8.76□□□□□ -1.01
CASP4-212ENST00000533730 CCDC194A0A1B0GVG4 234 aa8.75□□□□□ -1.01
CASP4-212ENST00000533730 PTPDC1A2A3K4 754 aa8.75□□□□□ -1.01
CASP4-212ENST00000533730 RNF225M0QZC1 329 aaPredicted RBP8.75□□□□□ -1.01
CASP4-212ENST00000533730 NFIBO00712 420 aa8.75□□□□□ -1.01
CASP4-212ENST00000533730 MSCO60682 206 aa8.75□□□□□ -1.01
CASP4-212ENST00000533730 PLEKHA8P1O95397 391 aa8.75□□□□□ -1.01
CASP4-212ENST00000533730 PGK2P07205 417 aa8.75□□□□□ -1.01
CASP4-212ENST00000533730 FAM153BP0C7A2 387 aa8.75□□□□□ -1.01
CASP4-212ENST00000533730 CCL5P13501 91 aa8.75□□□□□ -1.01
CASP4-212ENST00000533730 RXRAP19793 462 aa8.75□□□□□ -1.01
CASP4-212ENST00000533730 PDIA3P30101 505 aaKnown RBP8.75□□□□□ -1.01
CASP4-212ENST00000533730 NEK4P51957 841 aa8.75□□□□□ -1.01
CASP4-212ENST00000533730 GHRHRQ02643 423 aa8.75□□□□□ -1.01
CASP4-212ENST00000533730 CCL14Q16627 93 aa8.75□□□□□ -1.01
CASP4-212ENST00000533730 MAP3K21Q5TCX8 1036 aa8.75□□□□□ -1.01
CASP4-212ENST00000533730 MAMDC4Q6UXC1 1216 aa8.75□□□□□ -1.01
CASP4-212ENST00000533730 RNF207Q6ZRF8 634 aa8.75□□□□□ -1.01
CASP4-212ENST00000533730 RAB11FIP4Q86YS3 637 aa8.75□□□□□ -1.01
CASP4-212ENST00000533730 SRBD1Q8N5C6 995 aaKnown RBP8.75□□□□□ -1.01
CASP4-212ENST00000533730 FAM133AQ8N9E0 248 aa8.75□□□□□ -1.01
CASP4-212ENST00000533730 ZSWIM2Q8NEG5 633 aa8.75□□□□□ -1.01
CASP4-212ENST00000533730 DNERQ8NFT8 737 aa8.75□□□□□ -1.01
CASP4-212ENST00000533730 RNF208Q9H0X6 261 aa8.75□□□□□ -1.01
CASP4-212ENST00000533730 GABBR1Q9UBS5 961 aa8.75□□□□□ -1.01
CASP4-212ENST00000533730 CNPY2Q9Y2B0 182 aa8.75□□□□□ -1.01
CASP4-212ENST00000533730 CPLX1O14810 134 aa8.74□□□□□ -1.01
CASP4-212ENST00000533730 CDKL5O76039 1030 aa8.74□□□□□ -1.01
CASP4-212ENST00000533730 GJB1P08034 283 aa8.74□□□□□ -1.01
CASP4-212ENST00000533730 GUCY2CP25092 1073 aa8.74□□□□□ -1.01
CASP4-212ENST00000533730 RPS6P62753 249 aaKnown RBP8.74□□□□□ -1.01
CASP4-212ENST00000533730 AKAP17AQ02040 695 aaKnown RBP8.74□□□□□ -1.01
CASP4-212ENST00000533730 CACNB2Q08289 660 aaPredicted RBP8.74□□□□□ -1.01
CASP4-212ENST00000533730 ZNF252P-AS1Q0IIN9 211 aa8.74□□□□□ -1.01
CASP4-212ENST00000533730 BAATQ14032 418 aaPredicted RBP8.74□□□□□ -1.01
CASP4-212ENST00000533730 SLC35G1Q2M3R5 365 aa8.74□□□□□ -1.01
CASP4-212ENST00000533730 CEP135Q66GS9 1140 aa8.74□□□□□ -1.01
CASP4-212ENST00000533730 VN1R5Q7Z5H4 357 aa8.74□□□□□ -1.01
CASP4-212ENST00000533730 ZNF669Q96BR6 464 aaPredicted RBP8.74□□□□□ -1.01
CASP4-212ENST00000533730 EMILIN2Q9BXX0 1053 aa8.74□□□□□ -1.01
CASP4-212ENST00000533730 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.74□□□□□ -1.01
CASP4-212ENST00000533730 GLT8D2Q9H1C3 349 aa8.74□□□□□ -1.01
CASP4-212ENST00000533730 PAK6Q9NQU5 681 aaPredicted RBP8.74□□□□□ -1.01
CASP4-212ENST00000533730 FLRT1Q9NZU1 646 aa8.74□□□□□ -1.01
CASP4-212ENST00000533730 MYH6P13533 1939 aa8.74□□□□□ -1.01
CASP4-212ENST00000533730 PLXNA1Q9UIW2 1896 aa8.73□□□□□ -1.01
CASP4-212ENST00000533730 MEIS3P2A8K0S8 358 aa8.73□□□□□ -1.01
CASP4-212ENST00000533730 GCOM1H8Y6P7 765 aaPredicted RBP8.73□□□□□ -1.01
CASP4-212ENST00000533730 TPD52L2O43399 206 aaKnown RBP8.73□□□□□ -1.01
CASP4-212ENST00000533730 PPP1R11O60927 126 aaPredicted RBP8.73□□□□□ -1.01
CASP4-212ENST00000533730 SMNDC1O75940 238 aaKnown RBP eCLIP8.73□□□□□ -1.01
CASP4-212ENST00000533730 POLR2MP0CAP2 368 aa8.73□□□□□ -1.01
CASP4-212ENST00000533730 CYBAP13498 195 aa8.73□□□□□ -1.01
CASP4-212ENST00000533730 IFNAR1P17181 557 aa8.73□□□□□ -1.01
CASP4-212ENST00000533730 POU3F3P20264 500 aaPredicted RBP8.73□□□□□ -1.01
CASP4-212ENST00000533730 CALML3P27482 149 aa8.73□□□□□ -1.01
CASP4-212ENST00000533730 CDC27P30260 824 aa8.73□□□□□ -1.01
CASP4-212ENST00000533730 CYP2C19P33261 490 aa8.73□□□□□ -1.01
CASP4-212ENST00000533730 HSD17B4P51659 736 aa8.73□□□□□ -1.01
CASP4-212ENST00000533730 AK2P54819 239 aa8.73□□□□□ -1.01
CASP4-212ENST00000533730 CNTN2Q02246 1040 aa8.73□□□□□ -1.01
CASP4-212ENST00000533730 RABEP1Q15276 862 aa8.73□□□□□ -1.01
CASP4-212ENST00000533730 SLC30A10Q6XR72 485 aa8.73□□□□□ -1.01
CASP4-212ENST00000533730 ARMCX2Q7L311 632 aa8.73□□□□□ -1.01
CASP4-212ENST00000533730 EEPD1Q7L9B9 569 aa8.73□□□□□ -1.01
CASP4-212ENST00000533730 THNSL2Q86YJ6 484 aa8.73□□□□□ -1.01
CASP4-212ENST00000533730 CACTIN-AS1Q8N1I8 211 aa8.73□□□□□ -1.01
CASP4-212ENST00000533730 NSUN6Q8TEA1 469 aaKnown RBP8.73□□□□□ -1.01
CASP4-212ENST00000533730 CCDC12Q8WUD4 166 aaPredicted RBP8.73□□□□□ -1.01
CASP4-212ENST00000533730 PIBF1Q8WXW3 757 aa8.73□□□□□ -1.01
CASP4-212ENST00000533730 CUL5Q93034 780 aa8.73□□□□□ -1.01
CASP4-212ENST00000533730 MFSD3Q96ES6 412 aa8.73□□□□□ -1.01
CASP4-212ENST00000533730 CEP89Q96ST8 783 aa8.73□□□□□ -1.01
CASP4-212ENST00000533730 TM9SF2Q99805 663 aa8.73□□□□□ -1.01
CASP4-212ENST00000533730 RNF26Q9BY78 433 aaPredicted RBP8.73□□□□□ -1.01
CASP4-212ENST00000533730 ADAM19Q9H013 955 aa8.73□□□□□ -1.01
CASP4-212ENST00000533730 ABHD16BQ9H3Z7 469 aa8.73□□□□□ -1.01
CASP4-212ENST00000533730 SOX13Q9UN79 622 aa8.73□□□□□ -1.01
CASP4-212ENST00000533730 ATP8A1Q9Y2Q0 1164 aa8.73□□□□□ -1.01
CASP4-212ENST00000533730 ZNFX1Q9P2E3 1918 aaKnown RBP8.73□□□□□ -1.01
CASP4-212ENST00000533730 RBBP6Q7Z6E9 1792 aaKnown RBP8.73□□□□□ -1.01
CASP4-212ENST00000533730 SEPT4O43236 478 aa8.72□□□□□ -1.01
CASP4-212ENST00000533730 PRPF3O43395 683 aaKnown RBP8.72□□□□□ -1.01
CASP4-212ENST00000533730 PFKFB2O60825 505 aa8.72□□□□□ -1.01
CASP4-212ENST00000533730 SGPL1O95470 568 aa8.72□□□□□ -1.01
CASP4-212ENST00000533730 CFBP00751 764 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms