RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 MAP3K12Q12852 859 aa9.64□□□□□ -0.87
CSDE1-213ENST00000530784 ICAM4Q14773 271 aa9.64□□□□□ -0.87
CSDE1-213ENST00000530784 MYBPC3Q14896 1274 aa9.64□□□□□ -0.87
CSDE1-213ENST00000530784 SART3Q15020 963 aaKnown RBP9.64□□□□□ -0.87
CSDE1-213ENST00000530784 AGBL4Q5VU57 503 aa9.64□□□□□ -0.87
CSDE1-213ENST00000530784 ST6GALNAC2Q9UJ37 374 aa9.64□□□□□ -0.87
CSDE1-213ENST00000530784 NR2E1Q9Y466 385 aa9.64□□□□□ -0.87
CSDE1-213ENST00000530784 IGSF3O75054 1194 aa9.63□□□□□ -0.87
CSDE1-213ENST00000530784 ATF3P18847 181 aa9.63□□□□□ -0.87
CSDE1-213ENST00000530784 ANTXR2P58335 489 aa9.63□□□□□ -0.87
CSDE1-213ENST00000530784 SMAD3P84022 425 aaKnown RBP9.63□□□□□ -0.87
CSDE1-213ENST00000530784 USP30Q70CQ3 517 aa9.63□□□□□ -0.87
CSDE1-213ENST00000530784 OR2W6PQ8NHA6 318 aa9.63□□□□□ -0.87
CSDE1-213ENST00000530784 C8orf49Q96NF6 230 aa9.63□□□□□ -0.87
CSDE1-213ENST00000530784 SPTLC3Q9NUV7 552 aa9.63□□□□□ -0.87
CSDE1-213ENST00000530784 ARHGAP6O43182 974 aa9.62□□□□□ -0.87
CSDE1-213ENST00000530784 KRTAP10-2P60368 255 aa9.62□□□□□ -0.87
CSDE1-213ENST00000530784 NFKB2Q00653 900 aa9.62□□□□□ -0.87
CSDE1-213ENST00000530784 PHYKPLQ8IUZ5 450 aa9.62□□□□□ -0.87
CSDE1-213ENST00000530784 PASD1Q8IV76 773 aa9.62□□□□□ -0.87
CSDE1-213ENST00000530784 ZZZ3Q8IYH5 903 aa9.62□□□□□ -0.87
CSDE1-213ENST00000530784 C7orf31Q8N865 590 aa9.62□□□□□ -0.87
CSDE1-213ENST00000530784 OR10A2Q9H208 303 aa9.62□□□□□ -0.87
CSDE1-213ENST00000530784 POFUT1Q9H488 388 aa9.62□□□□□ -0.87
CSDE1-213ENST00000530784 FAM184BQ9ULE4 1060 aa9.62□□□□□ -0.87
CSDE1-213ENST00000530784 MAPRE3Q9UPY8 281 aa9.62□□□□□ -0.87
CSDE1-213ENST00000530784 AHDC1Q5TGY3 1603 aaPredicted RBP9.62□□□□□ -0.87
CSDE1-213ENST00000530784 SETBP1Q9Y6X0 1596 aa9.62□□□□□ -0.87
CSDE1-213ENST00000530784 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.62□□□□□ -0.87
CSDE1-213ENST00000530784 SPATA31A6Q5VVP1 1343 aa9.61□□□□□ -0.87
CSDE1-213ENST00000530784 MATN2O00339 956 aa9.61□□□□□ -0.87
CSDE1-213ENST00000530784 APOL3O95236 402 aa9.61□□□□□ -0.87
CSDE1-213ENST00000530784 ADCYAP1R1P41586 468 aa9.61□□□□□ -0.87
CSDE1-213ENST00000530784 IL2P60568 153 aa9.61□□□□□ -0.87
CSDE1-213ENST00000530784 NFYCQ13952 458 aa9.61□□□□□ -0.87
CSDE1-213ENST00000530784 TAF7LQ5H9L4 462 aa9.61□□□□□ -0.87
CSDE1-213ENST00000530784 TAX1BP1Q86VP1 789 aa9.61□□□□□ -0.87
CSDE1-213ENST00000530784 TTC9BQ8N6N2 239 aa9.61□□□□□ -0.87
CSDE1-213ENST00000530784 CHST13Q8NET6 341 aa9.61□□□□□ -0.87
CSDE1-213ENST00000530784 DNERQ8NFT8 737 aa9.61□□□□□ -0.87
CSDE1-213ENST00000530784 OR5AN1Q8NGI8 311 aa9.61□□□□□ -0.87
CSDE1-213ENST00000530784 DPYSL5Q9BPU6 564 aa9.61□□□□□ -0.87
CSDE1-213ENST00000530784 MYL10Q9BUA6 226 aa9.61□□□□□ -0.87
CSDE1-213ENST00000530784 SAE1Q9UBE0 346 aaPredicted RBP9.61□□□□□ -0.87
CSDE1-213ENST00000530784 DCCP43146 1447 aa9.61□□□□□ -0.87
CSDE1-213ENST00000530784 PTPRUQ92729 1446 aa9.61□□□□□ -0.87
CSDE1-213ENST00000530784 SPHKAPQ2M3C7 1700 aa9.61□□□□□ -0.87
CSDE1-213ENST00000530784 LRP6O75581 1613 aa9.6□□□□□ -0.87
CSDE1-213ENST00000530784 NRXN3Q9Y4C0 1643 aa9.6□□□□□ -0.87
CSDE1-213ENST00000530784 XRN1Q8IZH2 1706 aaKnown RBP9.6□□□□□ -0.87
CSDE1-213ENST00000530784 PRPF6O94906 941 aaKnown RBP9.6□□□□□ -0.87
CSDE1-213ENST00000530784 FKBP9O95302 570 aa9.6□□□□□ -0.87
CSDE1-213ENST00000530784 LSSP48449 732 aa9.6□□□□□ -0.87
CSDE1-213ENST00000530784 ADCY2Q08462 1091 aa9.6□□□□□ -0.87
CSDE1-213ENST00000530784 LRRC32Q14392 662 aa9.6□□□□□ -0.87
CSDE1-213ENST00000530784 MEX3CQ5U5Q3 659 aaKnown RBP9.6□□□□□ -0.87
CSDE1-213ENST00000530784 TIGD7Q6NT04 549 aaPredicted RBP9.6□□□□□ -0.87
CSDE1-213ENST00000530784 TCTN3Q6NUS6 607 aa9.6□□□□□ -0.87
CSDE1-213ENST00000530784 UNQ6494/PRO21346Q6UXR6 183 aa9.6□□□□□ -0.87
CSDE1-213ENST00000530784 FKBP9P1Q75LS8 142 aa9.6□□□□□ -0.87
CSDE1-213ENST00000530784 KANSL1Q7Z3B3 1105 aa9.6□□□□□ -0.87
CSDE1-213ENST00000530784 THNSL2Q86YJ6 484 aa9.6□□□□□ -0.87
CSDE1-213ENST00000530784 OR14K1Q8NGZ2 314 aa9.6□□□□□ -0.87
CSDE1-213ENST00000530784 CFHR4Q92496 578 aa9.6□□□□□ -0.87
CSDE1-213ENST00000530784 SLKQ9H2G2 1235 aaPredicted RBP9.6□□□□□ -0.87
CSDE1-213ENST00000530784 SEMA4AQ9H3S1 761 aa9.6□□□□□ -0.87
CSDE1-213ENST00000530784 KCMF1Q9P0J7 381 aa9.6□□□□□ -0.87
CSDE1-213ENST00000530784 OAZ3Q9UMX2 235 aa9.6□□□□□ -0.87
CSDE1-213ENST00000530784 PATE3B3GLJ2 98 aa9.59□□□□□ -0.87
CSDE1-213ENST00000530784 FOXS1O43638 330 aa9.59□□□□□ -0.87
CSDE1-213ENST00000530784 ADRB1P08588 477 aa9.59□□□□□ -0.87
CSDE1-213ENST00000530784 CR2P20023 1033 aa9.59□□□□□ -0.87
CSDE1-213ENST00000530784 CD40P25942 277 aa9.59□□□□□ -0.87
CSDE1-213ENST00000530784 ADAM17P78536 824 aa9.59□□□□□ -0.87
CSDE1-213ENST00000530784 ADAM15Q13444 863 aa9.59□□□□□ -0.87
CSDE1-213ENST00000530784 DGKDQ16760 1214 aa9.59□□□□□ -0.87
CSDE1-213ENST00000530784 RNF180Q86T96 592 aa9.59□□□□□ -0.87
CSDE1-213ENST00000530784 GIMAP8Q8ND71 665 aaPredicted RBP9.59□□□□□ -0.87
CSDE1-213ENST00000530784 RPGRQ92834 1020 aaKnown RBP9.59□□□□□ -0.87
CSDE1-213ENST00000530784 KRTAP3-1Q9BYR8 98 aa9.59□□□□□ -0.87
CSDE1-213ENST00000530784 C12orf65Q9H3J6 166 aaKnown RBP9.59□□□□□ -0.87
CSDE1-213ENST00000530784 CD248Q9HCU0 757 aa9.59□□□□□ -0.87
CSDE1-213ENST00000530784 SHPRHQ149N8 1683 aa9.58□□□□□ -0.88
CSDE1-213ENST00000530784 ASXL1Q8IXJ9 1541 aa9.58□□□□□ -0.88
CSDE1-213ENST00000530784 CLTCL1P53675 1640 aa9.58□□□□□ -0.88
CSDE1-213ENST00000530784 BCAR1P56945 870 aa9.58□□□□□ -0.88
CSDE1-213ENST00000530784 OCRLQ01968 901 aa9.58□□□□□ -0.88
CSDE1-213ENST00000530784 BRINP3Q76B58 766 aa9.58□□□□□ -0.88
CSDE1-213ENST00000530784 UBR7Q8N806 425 aa9.58□□□□□ -0.88
CSDE1-213ENST00000530784 ZNF496Q96IT1 587 aaPredicted RBP9.58□□□□□ -0.88
CSDE1-213ENST00000530784 MS4A5Q9H3V2 200 aa9.58□□□□□ -0.88
CSDE1-213ENST00000530784 PUF60Q9UHX1 559 aaKnown RBP9.58□□□□□ -0.88
CSDE1-213ENST00000530784 DENND2AQ9ULE3 1009 aa9.58□□□□□ -0.88
CSDE1-213ENST00000530784 VWA7Q9Y334 891 aa9.58□□□□□ -0.88
CSDE1-213ENST00000530784 METP08581 1390 aa9.58□□□□□ -0.88
CSDE1-213ENST00000530784 NEXMIFQ5QGS0 1516 aa9.57□□□□□ -0.88
CSDE1-213ENST00000530784 SETD1AO15047 1707 aaKnown RBP9.57□□□□□ -0.88
CSDE1-213ENST00000530784 LCHNA4D1U4 455 aa9.57□□□□□ -0.88
CSDE1-213ENST00000530784 ELL2O00472 640 aaPredicted RBP9.57□□□□□ -0.88
CSDE1-213ENST00000530784 CDC14BO60729 498 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms