RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 DKC1O60832 514 aaKnown RBP eCLIP23.18■■□□□ 1.3
TSPAN4-219ENST00000530404 SSBP05455 408 aaKnown RBP eCLIP23.18■■□□□ 1.3
TSPAN4-219ENST00000530404 GCFC2P16383 781 aaKnown RBP23.18■■□□□ 1.3
TSPAN4-219ENST00000530404 YWHABP31946 246 aaKnown RBP23.18■■□□□ 1.3
TSPAN4-219ENST00000530404 ITIH3Q06033 890 aa23.18■■□□□ 1.3
TSPAN4-219ENST00000530404 LAMTOR4Q0VGL1 99 aa23.18■■□□□ 1.3
TSPAN4-219ENST00000530404 EMC2Q15006 297 aa23.18■■□□□ 1.3
TSPAN4-219ENST00000530404 EPHA7Q15375 998 aa23.18■■□□□ 1.3
TSPAN4-219ENST00000530404 UBXN11Q5T124 520 aa23.18■■□□□ 1.3
TSPAN4-219ENST00000530404 KREMEN2Q8NCW0 462 aa23.18■■□□□ 1.3
TSPAN4-219ENST00000530404 PGBD4Q96DM1 585 aa23.18■■□□□ 1.3
TSPAN4-219ENST00000530404 ORC3Q9UBD5 711 aaPredicted RBP23.18■■□□□ 1.3
TSPAN4-219ENST00000530404 TRIP11Q15643 1979 aa23.18■■□□□ 1.3
TSPAN4-219ENST00000530404 DOCK6Q96HP0 2047 aa23.17■■□□□ 1.3
TSPAN4-219ENST00000530404 POMCP01189 267 aa23.17■■□□□ 1.3
TSPAN4-219ENST00000530404 XBP1P17861 261 aa23.17■■□□□ 1.3
TSPAN4-219ENST00000530404 RFC5P40937 340 aa23.17■■□□□ 1.3
TSPAN4-219ENST00000530404 TCF15Q12870 199 aa23.17■■□□□ 1.3
TSPAN4-219ENST00000530404 NR5A1Q13285 461 aa23.17■■□□□ 1.3
TSPAN4-219ENST00000530404 XKR9Q5GH70 373 aa23.17■■□□□ 1.3
TSPAN4-219ENST00000530404 SRGAP1Q7Z6B7 1085 aa23.17■■□□□ 1.3
TSPAN4-219ENST00000530404 C4orf19Q8IY42 314 aa23.17■■□□□ 1.3
TSPAN4-219ENST00000530404 RNF149Q8NC42 400 aa23.17■■□□□ 1.3
TSPAN4-219ENST00000530404 URGCPQ8TCY9 931 aa23.17■■□□□ 1.3
TSPAN4-219ENST00000530404 SLC22A17Q8WUG5 538 aa23.17■■□□□ 1.3
TSPAN4-219ENST00000530404 RSAD1Q9HA92 442 aa23.17■■□□□ 1.3
TSPAN4-219ENST00000530404 HOXA11P31270 313 aaPredicted RBP23.16■■□□□ 1.3
TSPAN4-219ENST00000530404 MTHFRP42898 656 aa23.16■■□□□ 1.3
TSPAN4-219ENST00000530404 FOSBP53539 338 aa23.16■■□□□ 1.3
TSPAN4-219ENST00000530404 SPIRE1Q08AE8 756 aa23.16■■□□□ 1.3
TSPAN4-219ENST00000530404 PTPN14Q15678 1187 aa23.16■■□□□ 1.3
TSPAN4-219ENST00000530404 FERMT3Q86UX7 667 aa23.16■■□□□ 1.3
TSPAN4-219ENST00000530404 NECTIN4Q96NY8 510 aa23.16■■□□□ 1.3
TSPAN4-219ENST00000530404 MYO15AQ9UKN7 3530 aa23.16■■□□□ 1.3
TSPAN4-219ENST00000530404 VPS13AQ96RL7 3174 aa23.16■■□□□ 1.3
TSPAN4-219ENST00000530404 TBX3O15119 743 aa23.15■■□□□ 1.3
TSPAN4-219ENST00000530404 LARGE1O95461 756 aa23.15■■□□□ 1.3
TSPAN4-219ENST00000530404 BRD1O95696 1058 aa23.15■■□□□ 1.3
TSPAN4-219ENST00000530404 ASGR2P07307 311 aa23.15■■□□□ 1.3
TSPAN4-219ENST00000530404 AK2P54819 239 aa23.15■■□□□ 1.3
TSPAN4-219ENST00000530404 PTPN5P54829 565 aa23.15■■□□□ 1.3
TSPAN4-219ENST00000530404 KIAA1841Q6NSI8 718 aa23.15■■□□□ 1.3
TSPAN4-219ENST00000530404 TMC5Q6UXY8 1006 aa23.15■■□□□ 1.3
TSPAN4-219ENST00000530404 MRPL10Q7Z7H8 261 aaKnown RBP23.15■■□□□ 1.3
TSPAN4-219ENST00000530404 TPH2Q8IWU9 490 aa23.15■■□□□ 1.3
TSPAN4-219ENST00000530404 NECAB1Q8N987 351 aa23.15■■□□□ 1.3
TSPAN4-219ENST00000530404 RSPH1Q8WYR4 309 aa23.15■■□□□ 1.3
TSPAN4-219ENST00000530404 RIPOR3Q96MK2 946 aa23.15■■□□□ 1.3
TSPAN4-219ENST00000530404 FAM193BQ96PV7 902 aaPredicted RBP23.15■■□□□ 1.3
TSPAN4-219ENST00000530404 MTRQ99707 1265 aa23.15■■□□□ 1.3
TSPAN4-219ENST00000530404 FAM86C1Q9NVL1 165 aa23.15■■□□□ 1.3
TSPAN4-219ENST00000530404 DZANK1Q9NVP4 752 aa23.15■■□□□ 1.3
TSPAN4-219ENST00000530404 DBR1Q9UK59 544 aaKnown RBP23.15■■□□□ 1.3
TSPAN4-219ENST00000530404 IRAK3Q9Y616 596 aa23.15■■□□□ 1.3
TSPAN4-219ENST00000530404 DOCK8Q8NF50 2099 aa23.15■■□□□ 1.3
TSPAN4-219ENST00000530404 FDPSP14324 419 aaKnown RBP23.14■■□□□ 1.29
TSPAN4-219ENST00000530404 KRT2P35908 639 aa23.14■■□□□ 1.29
TSPAN4-219ENST00000530404 GIT2Q14161 759 aa23.14■■□□□ 1.29
TSPAN4-219ENST00000530404 OTUD6AQ7L8S5 288 aa23.14■■□□□ 1.29
TSPAN4-219ENST00000530404 SMG8Q8ND04 991 aaKnown RBP23.14■■□□□ 1.29
TSPAN4-219ENST00000530404 TCP11Q8WWU5 503 aa23.14■■□□□ 1.29
TSPAN4-219ENST00000530404 CPB2Q96IY4 423 aa23.14■■□□□ 1.29
TSPAN4-219ENST00000530404 EIF2AQ9BY44 585 aaKnown RBP23.14■■□□□ 1.29
TSPAN4-219ENST00000530404 ZSWIM4Q9H7M6 989 aa23.14■■□□□ 1.29
TSPAN4-219ENST00000530404 XPNPEP1Q9NQW7 623 aa23.14■■□□□ 1.29
TSPAN4-219ENST00000530404 PPME1Q9Y570 386 aa23.14■■□□□ 1.29
TSPAN4-219ENST00000530404 CFAP54Q96N23 3096 aa23.14■■□□□ 1.29
TSPAN4-219ENST00000530404 NRP1O14786 923 aa23.13■■□□□ 1.29
TSPAN4-219ENST00000530404 BAG4O95429 457 aaKnown RBP23.13■■□□□ 1.29
TSPAN4-219ENST00000530404 AVPR2P30518 371 aa23.13■■□□□ 1.29
TSPAN4-219ENST00000530404 MTMR3Q13615 1198 aa23.13■■□□□ 1.29
TSPAN4-219ENST00000530404 CABP7Q86V35 215 aa23.13■■□□□ 1.29
TSPAN4-219ENST00000530404 EXOC8Q8IYI6 725 aa23.13■■□□□ 1.29
TSPAN4-219ENST00000530404 TDRD5Q8NAT2 981 aaKnown RBP23.13■■□□□ 1.29
TSPAN4-219ENST00000530404 TNFRSF25Q93038 417 aa23.13■■□□□ 1.29
TSPAN4-219ENST00000530404 KLHL5Q96PQ7 755 aa23.13■■□□□ 1.29
TSPAN4-219ENST00000530404 NAP1L4Q99733 375 aaKnown RBP23.13■■□□□ 1.29
TSPAN4-219ENST00000530404 SORCS3Q9UPU3 1222 aa23.13■■□□□ 1.29
TSPAN4-219ENST00000530404 FAN1Q9Y2M0 1017 aa23.13■■□□□ 1.29
TSPAN4-219ENST00000530404 PRG3Q9Y2Y8 225 aaPredicted RBP23.13■■□□□ 1.29
TSPAN4-219ENST00000530404 CNTNAP2Q9UHC6 1331 aa23.12■■□□□ 1.29
TSPAN4-219ENST00000530404 SPDYE4A6NLX3 237 aa23.12■■□□□ 1.29
TSPAN4-219ENST00000530404 WNT7AO00755 349 aa23.12■■□□□ 1.29
TSPAN4-219ENST00000530404 C2CD2LO14523 706 aa23.12■■□□□ 1.29
TSPAN4-219ENST00000530404 ERLIN2O94905 339 aa23.12■■□□□ 1.29
TSPAN4-219ENST00000530404 SLITRK3O94933 977 aa23.12■■□□□ 1.29
TSPAN4-219ENST00000530404 NCLP19338 710 aaKnown RBP23.12■■□□□ 1.29
TSPAN4-219ENST00000530404 ATAT1Q5SQI0 421 aa23.12■■□□□ 1.29
TSPAN4-219ENST00000530404 SLFN12Q8IYM2 578 aa23.12■■□□□ 1.29
TSPAN4-219ENST00000530404 EIF2AK1Q9BQI3 630 aaKnown RBP23.12■■□□□ 1.29
TSPAN4-219ENST00000530404 RNF39Q9H2S5 420 aa23.12■■□□□ 1.29
TSPAN4-219ENST00000530404 LIMD1Q9UGP4 676 aa23.12■■□□□ 1.29
TSPAN4-219ENST00000530404 HES2Q9Y543 173 aa23.12■■□□□ 1.29
TSPAN4-219ENST00000530404 IPPQ9Y573 584 aa23.12■■□□□ 1.29
TSPAN4-219ENST00000530404 CACNA1HO95180 2353 aa23.12■■□□□ 1.29
TSPAN4-219ENST00000530404 A0A087WWV3 80 aa23.11■■□□□ 1.29
TSPAN4-219ENST00000530404 CARNS1A5YM72 827 aa23.11■■□□□ 1.29
TSPAN4-219ENST00000530404 ASAP2O43150 1006 aa23.11■■□□□ 1.29
TSPAN4-219ENST00000530404 GAS2O43903 313 aaKnown RBP23.11■■□□□ 1.29
TSPAN4-219ENST00000530404 TSPAN1O60635 241 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms