RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 ECM1Q16610 540 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 CDO1Q16878 200 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 EDRF1Q3B7T1 1238 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 FIGNQ5HY92 759 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 PRAMEF18Q5VWM3 479 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 RFX8Q6ZV50 586 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 PODNQ7Z5L7 613 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 GRK7Q8WTQ7 553 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 SEC16BQ96JE7 1060 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 AGBL1Q96MI9 1066 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 CBWD1Q9BRT8 395 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 STK33Q9BYT3 514 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 RIOX1Q9H6W3 641 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 CNOT10Q9H9A5 744 aaKnown RBP10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 SYNGAP1Q96PV0 1343 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 ADCY2Q08462 1091 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 SPP2Q13103 211 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 SWSAP1Q6NVH7 229 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 MAIP1Q8WWC4 291 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 SLC7A3Q8WY07 619 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 SLITRK6Q9H5Y7 841 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 ZNF277Q9NRM2 450 aaPredicted RBP10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 GABBR1Q9UBS5 961 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 PODXLO00592 558 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 TXNDC9O14530 226 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 CALCAP01258 141 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 SCP2P22307 547 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 QARSP47897 775 aaKnown RBP10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 KRT17Q04695 432 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 SEZ6Q53EL9 994 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 ZNF354CQ86Y25 554 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 MCF2L2Q86YR7 1114 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 PPFIBP2Q8ND30 876 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 CNKSR1Q969H4 720 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 ACSF2Q96CM8 615 aaPredicted RBP10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 FAM84AQ96KN4 292 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 ISCUQ9H1K1 167 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 TRPC6Q9Y210 931 aa10.62□□□□□ -0.71
CCDC90B-214ENST00000529689 CAMTA1Q9Y6Y1 1673 aa10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 ESYT2A0FGR8 921 aa10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 ZNF233A6NK53 670 aa10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 SAT1P21673 171 aa10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 CCDC62Q6P9F0 684 aa10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 PPP1R9AQ9ULJ8 1098 aa10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 CACNA1FO60840 1977 aa10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 A0A0G2JND7 137 aa10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 MIF4GDA9UHW6 222 aaKnown RBP10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 PIK3R2O00459 728 aa10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 ARP10275 920 aa10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 MAN1A1P33908 653 aa10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 TTMPQ5BVD1 217 aa10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 SLC10A5Q5PT55 438 aa10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 DNAJC24Q6P3W2 148 aa10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 SYT2Q8N9I0 419 aaPredicted RBP10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 KLF6Q99612 283 aaPredicted RBP10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 ERP44Q9BS26 406 aa10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 GINM1Q9NU53 330 aa10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 FGFR1OP2Q9NVK5 253 aa10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 FAM86B1E9PN63 330 aa10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 STAM2O75886 525 aa10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 FAM86B2P0C5J1 330 aa10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 TROVE2P10155 538 aaKnown RBP eCLIP10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 GNPTABQ3T906 1256 aa10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 ARHGEF18Q6ZSZ5 1173 aa10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 NCAPG2Q86XI2 1143 aa10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 EPS8L3Q8TE67 593 aaKnown RBP10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 HAS1Q92839 578 aa10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 ZNF408Q9H9D4 720 aa10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 HSPBP1Q9NZL4 362 aa10.61□□□□□ -0.71
CCDC90B-214ENST00000529689 MYO3BQ8WXR4 1341 aa10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 ARHGAP42A6NI28 874 aa10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 EML1O00423 815 aa10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 P4HBP07237 508 aaKnown RBP10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 SLC8A1P32418 973 aa10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 SOX10P56693 466 aa10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 ORC2Q13416 577 aaPredicted RBP10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 MUM1Q2TAK8 710 aa10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 CFAP157Q5JU67 520 aa10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 MEI1Q5TIA1 1274 aa10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 RFX6Q8HWS3 928 aa10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 ANKMY2Q8IV38 441 aa10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 C4orf33Q8N1A6 199 aa10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 AENQ8WTP8 325 aaKnown RBP10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 RAPGEF5Q92565 580 aa10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 ATP6V0A1Q93050 837 aa10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 MASTLQ96GX5 879 aa10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 TMEM117Q9H0C3 514 aa10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 SEMA4AQ9H3S1 761 aa10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 ACTR5Q9H9F9 607 aaPredicted RBP10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 ETNK1Q9HBU6 452 aa10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 SLC24A3Q9HC58 644 aa10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 AGPAT3Q9NRZ7 376 aa10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 DKC1O60832 514 aaKnown RBP eCLIP10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 RNF8O76064 485 aa10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 PLS3P13797 630 aa10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 CHRNA3P32297 505 aa10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 GBP1P32455 592 aa10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 ITIH3Q06033 890 aa10.6□□□□□ -0.71
CCDC90B-214ENST00000529689 LRRC55Q6ZSA7 311 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms