RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 STK17AQ9UEE5 414 aa15.9■□□□□ 0.14
NXF1-204ENST00000527064 ATP6V1DQ9Y5K8 247 aa15.9■□□□□ 0.14
NXF1-204ENST00000527064 CNTNAP2Q9UHC6 1331 aa15.9■□□□□ 0.14
NXF1-204ENST00000527064 CCDC169A6NNP5 214 aa15.89■□□□□ 0.13
NXF1-204ENST00000527064 BRD1O95696 1058 aa15.89■□□□□ 0.13
NXF1-204ENST00000527064 PRKCBP05771 671 aa15.89■□□□□ 0.13
NXF1-204ENST00000527064 LINC00271P0C7V0 271 aa15.89■□□□□ 0.13
NXF1-204ENST00000527064 ARF4P18085 180 aaPredicted RBP15.89■□□□□ 0.13
NXF1-204ENST00000527064 LAG3P18627 525 aa15.89■□□□□ 0.13
NXF1-204ENST00000527064 GPM6BQ13491 265 aa15.89■□□□□ 0.13
NXF1-204ENST00000527064 CSPP1Q1MSJ5 1256 aa15.89■□□□□ 0.13
NXF1-204ENST00000527064 SPECC1Q5M775 1068 aa15.89■□□□□ 0.13
NXF1-204ENST00000527064 SLC27A1Q6PCB7 646 aa15.89■□□□□ 0.13
NXF1-204ENST00000527064 GLB1LQ6UWU2 654 aa15.89■□□□□ 0.13
NXF1-204ENST00000527064 CCDC73Q6ZRK6 1079 aa15.89■□□□□ 0.13
NXF1-204ENST00000527064 GPBP1Q86WP2 473 aa15.89■□□□□ 0.13
NXF1-204ENST00000527064 LARP4BQ92615 738 aaKnown RBP15.89■□□□□ 0.13
NXF1-204ENST00000527064 P2RX5Q93086 422 aa15.89■□□□□ 0.13
NXF1-204ENST00000527064 CPB2Q96IY4 423 aa15.89■□□□□ 0.13
NXF1-204ENST00000527064 CASD1Q96PB1 797 aa15.89■□□□□ 0.13
NXF1-204ENST00000527064 FZD8Q9H461 694 aa15.89■□□□□ 0.13
NXF1-204ENST00000527064 UBN1Q9NPG3 1134 aa15.89■□□□□ 0.13
NXF1-204ENST00000527064 RNF19AQ9NV58 838 aa15.89■□□□□ 0.13
NXF1-204ENST00000527064 TFIP11Q9UBB9 837 aaKnown RBP15.89■□□□□ 0.13
NXF1-204ENST00000527064 ODF2LQ9ULJ1 636 aa15.89■□□□□ 0.13
NXF1-204ENST00000527064 PCDHB12Q9Y5F1 795 aa15.89■□□□□ 0.13
NXF1-204ENST00000527064 MTCH2Q9Y6C9 303 aa15.89■□□□□ 0.13
NXF1-204ENST00000527064 FNDC1Q4ZHG4 1894 aaPredicted RBP15.88■□□□□ 0.13
NXF1-204ENST00000527064 CARNS1A5YM72 827 aa15.88■□□□□ 0.13
NXF1-204ENST00000527064 H0YCG3 227 aa15.88■□□□□ 0.13
NXF1-204ENST00000527064 N4BP3O15049 544 aa15.88■□□□□ 0.13
NXF1-204ENST00000527064 LPXNO60711 386 aa15.88■□□□□ 0.13
NXF1-204ENST00000527064 KRT18P05783 430 aaKnown RBP15.88■□□□□ 0.13
NXF1-204ENST00000527064 PLS3P13797 630 aa15.88■□□□□ 0.13
NXF1-204ENST00000527064 NCLP19338 710 aaKnown RBP15.88■□□□□ 0.13
NXF1-204ENST00000527064 NPTX2P47972 431 aa15.88■□□□□ 0.13
NXF1-204ENST00000527064 SMTNP53814 917 aa15.88■□□□□ 0.13
NXF1-204ENST00000527064 PEX3P56589 373 aa15.88■□□□□ 0.13
NXF1-204ENST00000527064 RAD51AP2Q09MP3 1159 aa15.88■□□□□ 0.13
NXF1-204ENST00000527064 MAPK7Q13164 816 aa15.88■□□□□ 0.13
NXF1-204ENST00000527064 PRPF4BQ13523 1007 aaKnown RBP15.88■□□□□ 0.13
NXF1-204ENST00000527064 FOXD4L6Q3SYB3 417 aaPredicted RBP15.88■□□□□ 0.13
NXF1-204ENST00000527064 CLLU1OSQ5K130 101 aa15.88■□□□□ 0.13
NXF1-204ENST00000527064 UBXN11Q5T124 520 aa15.88■□□□□ 0.13
NXF1-204ENST00000527064 RRAGBQ5VZM2 374 aa15.88■□□□□ 0.13
NXF1-204ENST00000527064 FOXD4L3Q6VB84 417 aaPredicted RBP15.88■□□□□ 0.13
NXF1-204ENST00000527064 APBB1IPQ7Z5R6 666 aaPredicted RBP15.88■□□□□ 0.13
NXF1-204ENST00000527064 DAW1Q8N136 415 aa15.88■□□□□ 0.13
NXF1-204ENST00000527064 MICALL1Q8N3F8 863 aa15.88■□□□□ 0.13
NXF1-204ENST00000527064 HELQQ8TDG4 1101 aa15.88■□□□□ 0.13
NXF1-204ENST00000527064 ADPGKQ9BRR6 497 aa15.88■□□□□ 0.13
NXF1-204ENST00000527064 KIFC3Q9BVG8 833 aa15.88■□□□□ 0.13
NXF1-204ENST00000527064 CCDC113Q9H0I3 377 aa15.88■□□□□ 0.13
NXF1-204ENST00000527064 LMAN2LQ9H0V9 348 aa15.88■□□□□ 0.13
NXF1-204ENST00000527064 KMT5AQ9NQR1 393 aa15.88■□□□□ 0.13
NXF1-204ENST00000527064 BLOC1S4Q9NUP1 217 aa15.88■□□□□ 0.13
NXF1-204ENST00000527064 LARSQ9P2J5 1176 aaKnown RBP15.88■□□□□ 0.13
NXF1-204ENST00000527064 RBM19Q9Y4C8 960 aaKnown RBP15.88■□□□□ 0.13
NXF1-204ENST00000527064 COL6A3P12111 3177 aa15.87■□□□□ 0.13
NXF1-204ENST00000527064 A0A1B0GUA9 196 aa15.87■□□□□ 0.13
NXF1-204ENST00000527064 ACKR2O00590 384 aa15.87■□□□□ 0.13
NXF1-204ENST00000527064 B4GALT5O43286 388 aa15.87■□□□□ 0.13
NXF1-204ENST00000527064 CUTAO60888 179 aa15.87■□□□□ 0.13
NXF1-204ENST00000527064 LIG1P18858 919 aa15.87■□□□□ 0.13
NXF1-204ENST00000527064 SCP2P22307 547 aa15.87■□□□□ 0.13
NXF1-204ENST00000527064 DDIT3P35638 169 aa15.87■□□□□ 0.13
NXF1-204ENST00000527064 DHX8Q14562 1220 aaKnown RBP15.87■□□□□ 0.13
NXF1-204ENST00000527064 MCM6Q14566 821 aa15.87■□□□□ 0.13
NXF1-204ENST00000527064 USP49Q70CQ1 688 aa15.87■□□□□ 0.13
NXF1-204ENST00000527064 MRPL10Q7Z7H8 261 aaKnown RBP15.87■□□□□ 0.13
NXF1-204ENST00000527064 URGCPQ8TCY9 931 aa15.87■□□□□ 0.13
NXF1-204ENST00000527064 SPIRE2Q8WWL2 714 aa15.87■□□□□ 0.13
NXF1-204ENST00000527064 LPPQ93052 612 aa15.87■□□□□ 0.13
NXF1-204ENST00000527064 MRPL38Q96DV4 380 aaKnown RBP15.87■□□□□ 0.13
NXF1-204ENST00000527064 TMEM134Q9H6X4 195 aa15.87■□□□□ 0.13
NXF1-204ENST00000527064 RSAD1Q9HA92 442 aa15.87■□□□□ 0.13
NXF1-204ENST00000527064 POLD4Q9HCU8 107 aa15.87■□□□□ 0.13
NXF1-204ENST00000527064 TYW1Q9NV66 732 aaKnown RBP15.87■□□□□ 0.13
NXF1-204ENST00000527064 ARHGAP28Q9P2N2 729 aa15.87■□□□□ 0.13
NXF1-204ENST00000527064 IPPQ9Y573 584 aa15.87■□□□□ 0.13
NXF1-204ENST00000527064 TRANK1O15050 2925 aa15.87■□□□□ 0.13
NXF1-204ENST00000527064 KIAA1671Q9BY89 1806 aa15.87■□□□□ 0.13
NXF1-204ENST00000527064 K7ERI5 159 aa15.86■□□□□ 0.13
NXF1-204ENST00000527064 TBCAO75347 108 aaKnown RBP15.86■□□□□ 0.13
NXF1-204ENST00000527064 ITGA4P13612 1032 aa15.86■□□□□ 0.13
NXF1-204ENST00000527064 STAT6P42226 847 aa15.86■□□□□ 0.13
NXF1-204ENST00000527064 DNM1Q05193 864 aaKnown RBP15.86■□□□□ 0.13
NXF1-204ENST00000527064 TIGD5Q53EQ6 642 aa15.86■□□□□ 0.13
NXF1-204ENST00000527064 NOMO2Q5JPE7 1267 aa15.86■□□□□ 0.13
NXF1-204ENST00000527064 COLGALT1Q8NBJ5 622 aa15.86■□□□□ 0.13
NXF1-204ENST00000527064 REEP2Q9BRK0 252 aa15.86■□□□□ 0.13
NXF1-204ENST00000527064 EIF2AQ9BY44 585 aaKnown RBP15.86■□□□□ 0.13
NXF1-204ENST00000527064 CWH43Q9H720 699 aa15.86■□□□□ 0.13
NXF1-204ENST00000527064 ZMYM2Q9UBW7 1377 aa15.86■□□□□ 0.13
NXF1-204ENST00000527064 FAM13AO94988 1023 aa15.85■□□□□ 0.13
NXF1-204ENST00000527064 NPTXRO95502 500 aa15.85■□□□□ 0.13
NXF1-204ENST00000527064 ABCD1P33897 745 aa15.85■□□□□ 0.13
NXF1-204ENST00000527064 PPM1AP35813 382 aa15.85■□□□□ 0.13
NXF1-204ENST00000527064 ME1P48163 572 aa15.85■□□□□ 0.13
NXF1-204ENST00000527064 KRT85P78386 507 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms