RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 HAS1Q92839 578 aa12.26□□□□□ -0.45
NEDD8-204ENST00000526430 ADAM2Q99965 735 aa12.26□□□□□ -0.45
NEDD8-204ENST00000526430 EPC1Q9H2F5 836 aa12.26□□□□□ -0.45
NEDD8-204ENST00000526430 TMEM60Q9H2L4 133 aa12.26□□□□□ -0.45
NEDD8-204ENST00000526430 SFXN1Q9H9B4 322 aa12.26□□□□□ -0.45
NEDD8-204ENST00000526430 ATP6V0A4Q9HBG4 840 aa12.26□□□□□ -0.45
NEDD8-204ENST00000526430 KCNMB3Q9NPA1 279 aa12.26□□□□□ -0.45
NEDD8-204ENST00000526430 PCDHA2Q9Y5H9 948 aa12.26□□□□□ -0.45
NEDD8-204ENST00000526430 GREB1Q4ZG55 1949 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 MSH4O15457 936 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 MAFGO15525 162 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 HOXA2O43364 376 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 FGFR1P11362 822 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 PDCP20941 246 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 FAM189BP81408 668 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 KRT76Q01546 638 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 TMEM62Q0P6H9 643 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 GIT2Q14161 759 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 BECN1Q14457 450 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 SAFBQ15424 915 aaKnown RBP eCLIP12.25□□□□□ -0.45
NEDD8-204ENST00000526430 LETM2Q2VYF4 491 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 PRR16Q569H4 304 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 SPECC1Q5M775 1068 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 KANK3Q6NY19 840 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 C15orf39Q6ZRI6 1047 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 LRRC55Q6ZSA7 311 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 SLC39A11Q8N1S5 342 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 NME8Q8N427 588 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 PJA1Q8NG27 643 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 SLC22A17Q8WUG5 538 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 GLG1Q92896 1179 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 SLC5A5Q92911 643 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 NXPE3Q969Y0 559 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 MTMR9Q96QG7 549 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 SMARCAD1Q9H4L7 1026 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.25□□□□□ -0.45
NEDD8-204ENST00000526430 KIF3AQ9Y496 699 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 PCDHB6Q9Y5E3 794 aa12.25□□□□□ -0.45
NEDD8-204ENST00000526430 SMIM35A0A1B0GVV1 85 aa12.24□□□□□ -0.45
NEDD8-204ENST00000526430 GSTTP1A0A1W2PQM5 241 aa12.24□□□□□ -0.45
NEDD8-204ENST00000526430 POTEMA6NI47 508 aa12.24□□□□□ -0.45
NEDD8-204ENST00000526430 H3BQV1 296 aa12.24□□□□□ -0.45
NEDD8-204ENST00000526430 SLC30A4O14863 429 aa12.24□□□□□ -0.45
NEDD8-204ENST00000526430 PSMD10O75832 226 aa12.24□□□□□ -0.45
NEDD8-204ENST00000526430 CCNE2O96020 404 aa12.24□□□□□ -0.45
NEDD8-204ENST00000526430 INSRRP14616 1297 aa12.24□□□□□ -0.45
NEDD8-204ENST00000526430 EPCAMP16422 314 aa12.24□□□□□ -0.45
NEDD8-204ENST00000526430 MARK3P27448 753 aa12.24□□□□□ -0.45
NEDD8-204ENST00000526430 SP4Q02446 784 aa12.24□□□□□ -0.45
NEDD8-204ENST00000526430 NFX1Q12986 1120 aaKnown RBP12.24□□□□□ -0.45
NEDD8-204ENST00000526430 MTMR1Q13613 665 aa12.24□□□□□ -0.45
NEDD8-204ENST00000526430 ZNF174Q15697 407 aa12.24□□□□□ -0.45
NEDD8-204ENST00000526430 IL17AQ16552 155 aa12.24□□□□□ -0.45
NEDD8-204ENST00000526430 TMEM266Q2M3C6 531 aa12.24□□□□□ -0.45
NEDD8-204ENST00000526430 POTEGQ6S5H5 508 aa12.24□□□□□ -0.45
NEDD8-204ENST00000526430 TMC5Q6UXY8 1006 aa12.24□□□□□ -0.45
NEDD8-204ENST00000526430 NLRX1Q86UT6 975 aa12.24□□□□□ -0.45
NEDD8-204ENST00000526430 CABP7Q86V35 215 aa12.24□□□□□ -0.45
NEDD8-204ENST00000526430 ZBTB44Q8NCP5 570 aa12.24□□□□□ -0.45
NEDD8-204ENST00000526430 SEPT1Q8WYJ6 367 aa12.24□□□□□ -0.45
NEDD8-204ENST00000526430 TNPO1Q92973 898 aaKnown RBP12.24□□□□□ -0.45
NEDD8-204ENST00000526430 DOCK6Q96HP0 2047 aa12.24□□□□□ -0.45
NEDD8-204ENST00000526430 CASD1Q96PB1 797 aa12.24□□□□□ -0.45
NEDD8-204ENST00000526430 BRMS1Q9HCU9 246 aa12.24□□□□□ -0.45
NEDD8-204ENST00000526430 ARHGEF3Q9NR81 526 aa12.24□□□□□ -0.45
NEDD8-204ENST00000526430 ANGPTL2Q9UKU9 493 aa12.24□□□□□ -0.45
NEDD8-204ENST00000526430 CA14Q9ULX7 337 aa12.24□□□□□ -0.45
NEDD8-204ENST00000526430 SMG5Q9UPR3 1016 aaKnown RBP12.24□□□□□ -0.45
NEDD8-204ENST00000526430 GCN1Q92616 2671 aaKnown RBP12.23□□□□□ -0.45
NEDD8-204ENST00000526430 NFASCO94856 1347 aa12.23□□□□□ -0.45
NEDD8-204ENST00000526430 VPS37CA5D8V6 355 aaPredicted RBP12.23□□□□□ -0.45
NEDD8-204ENST00000526430 CCNT1O60563 726 aaKnown RBP12.23□□□□□ -0.45
NEDD8-204ENST00000526430 LILRB5O75023 590 aa12.23□□□□□ -0.45
NEDD8-204ENST00000526430 RPS6KA5O75582 802 aa12.23□□□□□ -0.45
NEDD8-204ENST00000526430 ATG7O95352 703 aa12.23□□□□□ -0.45
NEDD8-204ENST00000526430 ZSCAN22P10073 491 aaPredicted RBP12.23□□□□□ -0.45
NEDD8-204ENST00000526430 HOXB3P14651 431 aaPredicted RBP12.23□□□□□ -0.45
NEDD8-204ENST00000526430 GLULP15104 373 aa12.23□□□□□ -0.45
NEDD8-204ENST00000526430 IBSPP21815 317 aaPredicted RBP12.23□□□□□ -0.45
NEDD8-204ENST00000526430 PBX3P40426 434 aa12.23□□□□□ -0.45
NEDD8-204ENST00000526430 IGBP1P78318 339 aa12.23□□□□□ -0.45
NEDD8-204ENST00000526430 SHC2P98077 582 aa12.23□□□□□ -0.45
NEDD8-204ENST00000526430 SPIRE1Q08AE8 756 aa12.23□□□□□ -0.45
NEDD8-204ENST00000526430 MCTP1Q6DN14 999 aa12.23□□□□□ -0.45
NEDD8-204ENST00000526430 PPFIBP1Q86W92 1011 aa12.23□□□□□ -0.45
NEDD8-204ENST00000526430 POTEDQ86YR6 584 aa12.23□□□□□ -0.45
NEDD8-204ENST00000526430 SLC44A3Q8N4M1 653 aa12.23□□□□□ -0.45
NEDD8-204ENST00000526430 NETO1Q8TDF5 533 aa12.23□□□□□ -0.45
NEDD8-204ENST00000526430 ATRIPQ8WXE1 791 aa12.23□□□□□ -0.45
NEDD8-204ENST00000526430 NELL1Q92832 810 aa12.23□□□□□ -0.45
NEDD8-204ENST00000526430 ZBTB10Q96DT7 871 aa12.23□□□□□ -0.45
NEDD8-204ENST00000526430 PCYT2Q99447 389 aa12.23□□□□□ -0.45
NEDD8-204ENST00000526430 ZBP1Q9H171 429 aa12.23□□□□□ -0.45
NEDD8-204ENST00000526430 PKD2L1Q9P0L9 805 aa12.23□□□□□ -0.45
NEDD8-204ENST00000526430 EPS15L1Q9UBC2 864 aa12.23□□□□□ -0.45
NEDD8-204ENST00000526430 USP18Q9UMW8 372 aa12.23□□□□□ -0.45
NEDD8-204ENST00000526430 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.22□□□□□ -0.45
NEDD8-204ENST00000526430 IPO5O00410 1097 aaKnown RBP12.22□□□□□ -0.45
NEDD8-204ENST00000526430 GPR182O15218 404 aa12.22□□□□□ -0.45
NEDD8-204ENST00000526430 TBC1D4O60343 1298 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms