RNA–Protein interactions for RNA: ENST00000525124.1

DEPDC1-205, Transcript of DEP domain containing 1, humanhuman

TSL 3

Gene DEPDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-205ENST00000525124 HFE2Q6ZVN8 426 aa9.46□□□□□ -0.9
DEPDC1-205ENST00000525124 COLGALT1Q8NBJ5 622 aa9.46□□□□□ -0.9
DEPDC1-205ENST00000525124 BICD2Q8TD16 824 aa9.46□□□□□ -0.9
DEPDC1-205ENST00000525124 MRPS27Q92552 414 aaKnown RBP9.46□□□□□ -0.9
DEPDC1-205ENST00000525124 FBXL18Q96ME1 805 aa9.46□□□□□ -0.9
DEPDC1-205ENST00000525124 PHF7Q9BWX1 381 aaPredicted RBP9.46□□□□□ -0.9
DEPDC1-205ENST00000525124 TMEM117Q9H0C3 514 aa9.46□□□□□ -0.9
DEPDC1-205ENST00000525124 ATP6V0A4Q9HBG4 840 aa9.46□□□□□ -0.9
DEPDC1-205ENST00000525124 TCEAL9Q9UHQ7 104 aa9.46□□□□□ -0.9
DEPDC1-205ENST00000525124 MUTYHQ9UIF7 546 aa9.46□□□□□ -0.9
DEPDC1-205ENST00000525124 SLC35F4A4IF30 521 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 TBKBP1A7MCY6 615 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 DDX39AO00148 427 aaKnown RBP9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 EOMESO95936 686 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 SRGAP2BP0DMP2 458 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 TMOD1P28289 359 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 SFNP31947 248 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 PPM1AP35813 382 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 GATMP50440 423 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 USP11P51784 963 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 EVCP57679 992 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 ZXDAP98168 799 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 CDC42EP1Q00587 391 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 NTRK3Q16288 839 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 RNFT1Q5M7Z0 435 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 FAM102BQ5T8I3 360 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 CENPQQ7L2Z9 268 aaPredicted RBP9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 FAM177A1Q8N128 213 aaPredicted RBP9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 REXO1Q8N1G1 1221 aaKnown RBP9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 CCDC148Q8NFR7 591 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 RDM1Q8NG50 284 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 LENG9Q96B70 501 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 TCEANC2Q96MN5 208 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 CASD1Q96PB1 797 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 UIMC1Q96RL1 719 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 RIT2Q99578 217 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 OSMRQ99650 979 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 RNF26Q9BY78 433 aaPredicted RBP9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 ADAMTS10Q9H324 1103 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 TLE6Q9H808 572 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 NGRNQ9NPE2 291 aaKnown RBP9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 SH3GLB2Q9NR46 395 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 RNF19AQ9NV58 838 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 TYW1Q9NV66 732 aaKnown RBP9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 USP15Q9Y4E8 981 aaPredicted RBP9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 PLXNA3P51805 1871 aa9.45□□□□□ -0.9
DEPDC1-205ENST00000525124 USP34Q70CQ2 3546 aa9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 WDR64B1ANS9 1081 aa9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 EPB41L2O43491 1005 aaKnown RBP9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 CDC45O75419 566 aa9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 VTNP04004 478 aa9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 ZSCAN20P17040 1043 aaPredicted RBP9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 IFNAR1P17181 557 aa9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 HOXB8P17481 243 aaPredicted RBP9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 EIF4BP23588 611 aaKnown RBP9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 ERVFC1P60507 584 aa9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 IRX6P78412 446 aaPredicted RBP9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 KIZQ2M2Z5 673 aa9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 SPOUT1Q5T280 376 aaKnown RBP9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 ZNF385CQ66K41 422 aaPredicted RBP9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 EFCAB12Q6NXP0 572 aa9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 ALYREFQ86V81 257 aaKnown RBP9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 ECHDC2Q86YB7 292 aa9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 CKAP2LQ8IYA6 745 aa9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 THNSL1Q8IYQ7 743 aa9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 LRRC43Q8N309 656 aa9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 TMEM151AQ8N4L1 468 aa9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 MAP7D2Q96T17 732 aa9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 TRAIPQ9BWF2 469 aa9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 C22orf23Q9BZE7 217 aa9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 S1PR5Q9H228 398 aa9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 NRBP2Q9NSY0 501 aa9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 PGPEP1Q9NXJ5 209 aa9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 GABBR1Q9UBS5 961 aa9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 PUF60Q9UHX1 559 aaKnown RBP9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 BARX2Q9UMQ3 279 aaPredicted RBP9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 GINS2Q9Y248 185 aa9.44□□□□□ -0.9
DEPDC1-205ENST00000525124 A0A0U1RQF3 1178 aa9.43□□□□□ -0.9
DEPDC1-205ENST00000525124 TMEM221A6NGB7 291 aa9.43□□□□□ -0.9
DEPDC1-205ENST00000525124 M0R296 226 aa9.43□□□□□ -0.9
DEPDC1-205ENST00000525124 EDIL3O43854 480 aa9.43□□□□□ -0.9
DEPDC1-205ENST00000525124 ZNF862O60290 1169 aa9.43□□□□□ -0.9
DEPDC1-205ENST00000525124 HSPA4P34932 840 aa9.43□□□□□ -0.9
DEPDC1-205ENST00000525124 MRE11P49959 708 aa9.43□□□□□ -0.9
DEPDC1-205ENST00000525124 GPC3P51654 580 aa9.43□□□□□ -0.9
DEPDC1-205ENST00000525124 CLCN3P51790 818 aa9.43□□□□□ -0.9
DEPDC1-205ENST00000525124 JAK3P52333 1124 aa9.43□□□□□ -0.9
DEPDC1-205ENST00000525124 NLRP11P59045 1033 aaKnown RBP9.43□□□□□ -0.9
DEPDC1-205ENST00000525124 SIGLEC14Q08ET2 396 aa9.43□□□□□ -0.9
DEPDC1-205ENST00000525124 APOBRQ0VD83 1088 aa9.43□□□□□ -0.9
DEPDC1-205ENST00000525124 TARBP2Q15633 366 aaKnown RBP9.43□□□□□ -0.9
DEPDC1-205ENST00000525124 Q4G0T1 1027 aa9.43□□□□□ -0.9
DEPDC1-205ENST00000525124 ANKRD54Q6NXT1 300 aa9.43□□□□□ -0.9
DEPDC1-205ENST00000525124 BLOC1S2Q6QNY1 142 aa9.43□□□□□ -0.9
DEPDC1-205ENST00000525124 KCNT2Q6UVM3 1135 aa9.43□□□□□ -0.9
DEPDC1-205ENST00000525124 B3GNT9Q6UX72 402 aa9.43□□□□□ -0.9
DEPDC1-205ENST00000525124 LRRC55Q6ZSA7 311 aa9.43□□□□□ -0.9
DEPDC1-205ENST00000525124 Q6ZUG5 572 aa9.43□□□□□ -0.9
DEPDC1-205ENST00000525124 RBM23Q86U06 439 aaKnown RBP9.43□□□□□ -0.9
DEPDC1-205ENST00000525124 METTL13Q8N6R0 699 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms