RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 ZCWPW2Q504Y3 356 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 FAM109BQ6ICB4 259 aaPredicted RBP7.79□□□□□ -1.16
VPS11-201ENST00000524454 KLHL10Q6JEL2 608 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 NFRKBQ6P4R8 1299 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 KCNV1Q6PIU1 500 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 METTL7BQ6UX53 244 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 STXBP4Q6ZWJ1 553 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 ZNF365Q70YC5 407 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 FILIP1Q7Z7B0 1213 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 DEFB128Q7Z7B8 93 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 MYOCDQ8IZQ8 938 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 TMEM199Q8N511 208 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 CSGALNACT2Q8N6G5 542 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 C7orf31Q8N865 590 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 KIAA0895Q8NCT3 520 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 DHX38Q92620 1227 aaKnown RBP7.79□□□□□ -1.16
VPS11-201ENST00000524454 FAM161BQ96MY7 647 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 NAP1L5Q96NT1 182 aaPredicted RBP7.79□□□□□ -1.16
VPS11-201ENST00000524454 EIF2AK1Q9BQI3 630 aaKnown RBP7.79□□□□□ -1.16
VPS11-201ENST00000524454 ZNF577Q9BSK1 485 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 C16orf70Q9BSU1 422 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 NUP58Q9BVL2 599 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 EDEM3Q9BZQ6 932 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 JADE2Q9NQC1 790 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 HCSTQ9UBK5 93 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 GTF2IRD1Q9UHL9 959 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 TCEAL9Q9UHQ7 104 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 DBR1Q9UK59 544 aaKnown RBP7.79□□□□□ -1.16
VPS11-201ENST00000524454 NOD1Q9Y239 953 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 GDAQ9Y2T3 454 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 DAAM1Q9Y4D1 1078 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 PCDHA2Q9Y5H9 948 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 COL4A3BPQ9Y5P4 624 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 RANBP2P49792 3224 aaKnown RBP7.79□□□□□ -1.16
VPS11-201ENST00000524454 NFASCO94856 1347 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 A0A1W2PQJ5 194 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 GSTTP1A0A1W2PQM5 241 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 GRXCR1A8MXD5 290 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 H3BRB1 525 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 N4BP3O15049 544 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 ZSCAN12O43309 604 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 PPFIA4O75335 1185 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 MED24O75448 989 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 P4HBP07237 508 aaKnown RBP7.78□□□□□ -1.16
VPS11-201ENST00000524454 SMIM10L2AP0DMW4 78 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 SMIM10L2BP0DMW5 78 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 HOXD8P13378 290 aaPredicted RBP7.78□□□□□ -1.16
VPS11-201ENST00000524454 CASP1P29466 404 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 TCF7P36402 384 aaPredicted RBP7.78□□□□□ -1.16
VPS11-201ENST00000524454 SNRPFP62306 86 aaKnown RBP7.78□□□□□ -1.16
VPS11-201ENST00000524454 FKBP3Q00688 224 aaKnown RBP7.78□□□□□ -1.16
VPS11-201ENST00000524454 COASYQ13057 564 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 ITGB3BPQ13352 177 aaPredicted RBP7.78□□□□□ -1.16
VPS11-201ENST00000524454 PPIGQ13427 754 aaKnown RBP eCLIP7.78□□□□□ -1.16
VPS11-201ENST00000524454 MYBPC2Q14324 1141 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 TMEM240Q5SV17 173 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 NCAPH2Q6IBW4 605 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 ZNF746Q6NUN9 644 aaPredicted RBP7.78□□□□□ -1.16
VPS11-201ENST00000524454 ARMCX5Q6P1M9 558 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 EPM2AIP1Q7L775 607 aaPredicted RBP7.78□□□□□ -1.16
VPS11-201ENST00000524454 OTOP2Q7RTS6 562 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 KCNK18Q7Z418 384 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 PPFIBP1Q86W92 1011 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 GPBP1Q86WP2 473 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 IRF2BP1Q8IU81 584 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 SMAP1Q8IYB5 467 aaPredicted RBP7.78□□□□□ -1.16
VPS11-201ENST00000524454 SMYD4Q8IYR2 804 aaPredicted RBP7.78□□□□□ -1.16
VPS11-201ENST00000524454 GOLGA5Q8TBA6 731 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 STAMQ92783 540 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 KCNN1Q92952 543 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 GJA10Q969M2 543 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 VWCEQ96DN2 955 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 ZBTB10Q96DT7 871 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 ERGIC2Q96RQ1 377 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 DUSP9Q99956 384 aaKnown RBP7.78□□□□□ -1.16
VPS11-201ENST00000524454 TUT1Q9H6E5 874 aaKnown RBP7.78□□□□□ -1.16
VPS11-201ENST00000524454 ZSWIM4Q9H7M6 989 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 AGO4Q9HCK5 861 aaKnown RBP7.78□□□□□ -1.16
VPS11-201ENST00000524454 IL23AQ9NPF7 189 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 KCNH7Q9NS40 1196 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 PANK4Q9NVE7 773 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 CGNQ9P2M7 1197 aaKnown RBP7.78□□□□□ -1.16
VPS11-201ENST00000524454 KCNG1Q9UIX4 513 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 TRAF3IP3Q9Y228 551 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 TET1Q8NFU7 2136 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 KAT6AQ92794 2004 aa7.78□□□□□ -1.16
VPS11-201ENST00000524454 WDR64B1ANS9 1081 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 AKR1B15C9JRZ8 316 aaPredicted RBP7.77□□□□□ -1.17
VPS11-201ENST00000524454 PDXKO00764 312 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 SLC16A3O15427 465 aaKnown RBP7.77□□□□□ -1.17
VPS11-201ENST00000524454 DHX15O43143 795 aaKnown RBP7.77□□□□□ -1.17
VPS11-201ENST00000524454 TREHO43280 583 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 MFAP3LO75121 409 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 TBCAO75347 108 aaKnown RBP7.77□□□□□ -1.17
VPS11-201ENST00000524454 SLITRK3O94933 977 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 SUPT20HL2P0C7V6 817 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 CDK17Q00537 523 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 PTPN11Q06124 597 aaPredicted RBP7.77□□□□□ -1.17
VPS11-201ENST00000524454 GIT2Q14161 759 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 ECM1Q16610 540 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms