RNA–Protein interactions for RNA: ENST00000523263.1

VIRMA-208, Transcript of vir like m6A methyltransferase associated, human

TSL 3

Gene VIRMA, Length 609 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VIRMA-208	ENST00000523263	RFX1	P22670	979 aa		10.63	□□□□□ -0.71
VIRMA-208	ENST00000523263	EXOSC10	Q01780	885 aa	Known RBP	10.63	□□□□□ -0.71
VIRMA-208	ENST00000523263	DRP2	Q13474	957 aa		10.63	□□□□□ -0.71
VIRMA-208	ENST00000523263	B3GNT9	Q6UX72	402 aa		10.63	□□□□□ -0.71
VIRMA-208	ENST00000523263	CATSPER4	Q7RTX7	472 aa		10.63	□□□□□ -0.71
VIRMA-208	ENST00000523263	MAML2	Q8IZL2	1156 aa	Predicted RBP	10.63	□□□□□ -0.71
VIRMA-208	ENST00000523263	REXO1	Q8N1G1	1221 aa	Known RBP	10.63	□□□□□ -0.71
VIRMA-208	ENST00000523263	CNNM3	Q8NE01	707 aa		10.63	□□□□□ -0.71
VIRMA-208	ENST00000523263	GPR152	Q8TDT2	470 aa		10.63	□□□□□ -0.71
VIRMA-208	ENST00000523263	SLC5A5	Q92911	643 aa		10.63	□□□□□ -0.71
VIRMA-208	ENST00000523263	ZNF707	Q96C28	371 aa	Predicted RBP	10.63	□□□□□ -0.71
VIRMA-208	ENST00000523263	FAM193B	Q96PV7	902 aa	Predicted RBP	10.63	□□□□□ -0.71
VIRMA-208	ENST00000523263	JPH2	Q9BR39	696 aa	Predicted RBP	10.63	□□□□□ -0.71
VIRMA-208	ENST00000523263	DDX23	Q9BUQ8	820 aa	Known RBP	10.63	□□□□□ -0.71
VIRMA-208	ENST00000523263	LRRC2	Q9BYS8	371 aa		10.63	□□□□□ -0.71
VIRMA-208	ENST00000523263	RSAD1	Q9HA92	442 aa		10.63	□□□□□ -0.71
VIRMA-208	ENST00000523263	UBN1	Q9NPG3	1134 aa		10.63	□□□□□ -0.71
VIRMA-208	ENST00000523263	CHST7	Q9NS84	486 aa		10.63	□□□□□ -0.71
VIRMA-208	ENST00000523263	AGPAT5	Q9NUQ2	364 aa		10.63	□□□□□ -0.71
VIRMA-208	ENST00000523263	BRPF3	Q9ULD4	1205 aa		10.63	□□□□□ -0.71
VIRMA-208	ENST00000523263	CA14	Q9ULX7	337 aa		10.63	□□□□□ -0.71
VIRMA-208	ENST00000523263	PIN4	Q9Y237	131 aa	Known RBP	10.63	□□□□□ -0.71
VIRMA-208	ENST00000523263	INPP5F	Q9Y2H2	1132 aa		10.63	□□□□□ -0.71
VIRMA-208	ENST00000523263	PCDHB2	Q9Y5E7	798 aa		10.63	□□□□□ -0.71
VIRMA-208	ENST00000523263	DMD	P11532	3685 aa		10.63	□□□□□ -0.71
VIRMA-208	ENST00000523263	CCDC196	A0A1B0GTZ2	297 aa		10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	PRR5-ARHGAP8	B1AHC4	643 aa		10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	MSH4	O15457	936 aa		10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	TEX28	O15482	410 aa		10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	EDIL3	O43854	480 aa		10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	GAS7	O60861	476 aa		10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	KIN	O60870	393 aa	Known RBP	10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	PSMD10	O75832	226 aa		10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	DCN	P07585	359 aa	Known RBP	10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	MAGEA9	P43362	315 aa		10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	ARHGAP8	P85298	464 aa		10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	DSG1	Q02413	1049 aa		10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	HTR4	Q13639	388 aa		10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	UGCG	Q16739	394 aa		10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	RSPO4	Q2I0M5	234 aa	Predicted RBP	10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	TSGA10IP	Q3SY00	556 aa		10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	DCLRE1A	Q6PJP8	1040 aa		10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	RSPO2	Q6UXX9	243 aa	Predicted RBP	10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	EXOC8	Q8IYI6	725 aa		10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	PJA1	Q8NG27	643 aa		10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	BICD2	Q8TD16	824 aa		10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	RIN2	Q8WYP3	895 aa	Predicted RBP	10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	SMG7	Q92540	1137 aa	Known RBP	10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	CNTNAP3B	Q96NU0	1288 aa		10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	CNTNAP3	Q9BZ76	1288 aa		10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	PRKD2	Q9BZL6	878 aa		10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	NT5C3A	Q9H0P0	336 aa		10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	GBP3	Q9H0R5	595 aa		10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	IFT122	Q9HBG6	1241 aa		10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	FNIP2	Q9P278	1114 aa		10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	SUCLA2	Q9P2R7	463 aa	Predicted RBP	10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	PPME1	Q9Y570	386 aa		10.62	□□□□□ -0.71
VIRMA-208	ENST00000523263	KANSL1L	A0AUZ9	987 aa		10.61	□□□□□ -0.71
VIRMA-208	ENST00000523263	PRPF3	O43395	683 aa	Known RBP	10.61	□□□□□ -0.71
VIRMA-208	ENST00000523263	GLUL	P15104	373 aa		10.61	□□□□□ -0.71
VIRMA-208	ENST00000523263	NCL	P19338	710 aa	Known RBP	10.61	□□□□□ -0.71
VIRMA-208	ENST00000523263	CDC27	P30260	824 aa		10.61	□□□□□ -0.71
VIRMA-208	ENST00000523263	HOXA11	P31270	313 aa	Predicted RBP	10.61	□□□□□ -0.71
VIRMA-208	ENST00000523263	AK2	P54819	239 aa		10.61	□□□□□ -0.71
VIRMA-208	ENST00000523263	PRKCQ	Q04759	706 aa		10.61	□□□□□ -0.71
VIRMA-208	ENST00000523263	DSC1	Q08554	894 aa		10.61	□□□□□ -0.71
VIRMA-208	ENST00000523263	PCBP1	Q15365	356 aa	Known RBP eCLIP	10.61	□□□□□ -0.71
VIRMA-208	ENST00000523263	VARS2	Q5ST30	1063 aa	Known RBP	10.61	□□□□□ -0.71
VIRMA-208	ENST00000523263	RNF20	Q5VTR2	975 aa		10.61	□□□□□ -0.71
VIRMA-208	ENST00000523263	LILRA6	Q6PI73	481 aa		10.61	□□□□□ -0.71
VIRMA-208	ENST00000523263	DHX32	Q7L7V1	743 aa	Known RBP	10.61	□□□□□ -0.71
VIRMA-208	ENST00000523263	SRGAP1	Q7Z6B7	1085 aa		10.61	□□□□□ -0.71
VIRMA-208	ENST00000523263	RHPN2	Q8IUC4	686 aa		10.61	□□□□□ -0.71
VIRMA-208	ENST00000523263	COLGALT2	Q8IYK4	626 aa		10.61	□□□□□ -0.71
VIRMA-208	ENST00000523263	DCLK2	Q8N568	766 aa		10.61	□□□□□ -0.71
VIRMA-208	ENST00000523263	ZBTB44	Q8NCP5	570 aa		10.61	□□□□□ -0.71
VIRMA-208	ENST00000523263	NELL1	Q92832	810 aa		10.61	□□□□□ -0.71
VIRMA-208	ENST00000523263	MBOAT7	Q96N66	472 aa		10.61	□□□□□ -0.71
VIRMA-208	ENST00000523263	HINFP	Q9BQA5	517 aa		10.61	□□□□□ -0.71
VIRMA-208	ENST00000523263	TEKT3	Q9BXF9	490 aa		10.61	□□□□□ -0.71
VIRMA-208	ENST00000523263	UNC45A	Q9H3U1	944 aa		10.61	□□□□□ -0.71
VIRMA-208	ENST00000523263	MARCH5	Q9NX47	278 aa		10.61	□□□□□ -0.71
VIRMA-208	ENST00000523263	PCDHGA2	Q9Y5H1	932 aa		10.61	□□□□□ -0.71
VIRMA-208	ENST00000523263	EP300	Q09472	2414 aa	Predicted RBP	10.6	□□□□□ -0.71
VIRMA-208	ENST00000523263	EVPL	Q92817	2033 aa		10.6	□□□□□ -0.71
VIRMA-208	ENST00000523263	CYP3A7-CYP3A51P	A0A087WV96	503 aa		10.6	□□□□□ -0.71
VIRMA-208	ENST00000523263	POTEM	A6NI47	508 aa		10.6	□□□□□ -0.71
VIRMA-208	ENST00000523263	GOLGA8A	A7E2F4	631 aa		10.6	□□□□□ -0.71
VIRMA-208	ENST00000523263	GOLGA8B	A8MQT2	603 aa		10.6	□□□□□ -0.71
VIRMA-208	ENST00000523263	ADAMTS3	O15072	1205 aa		10.6	□□□□□ -0.71
VIRMA-208	ENST00000523263	GAS2	O43903	313 aa	Known RBP	10.6	□□□□□ -0.71
VIRMA-208	ENST00000523263	RFPL2	O75678	378 aa		10.6	□□□□□ -0.71
VIRMA-208	ENST00000523263	KRT37	O76014	449 aa		10.6	□□□□□ -0.71
VIRMA-208	ENST00000523263	SSB	P05455	408 aa	Known RBP eCLIP	10.6	□□□□□ -0.71
VIRMA-208	ENST00000523263	CYP3A7	P24462	503 aa		10.6	□□□□□ -0.71
VIRMA-208	ENST00000523263	GLUD2	P49448	558 aa		10.6	□□□□□ -0.71
VIRMA-208	ENST00000523263	AFF1	P51825	1210 aa	Known RBP	10.6	□□□□□ -0.71
VIRMA-208	ENST00000523263	CREM	Q03060	361 aa		10.6	□□□□□ -0.71
VIRMA-208	ENST00000523263	LONRF3	Q496Y0	759 aa		10.6	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms