RNA–Protein interactions for RNA: ENST00000521829.5

VPS37A-210, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS37A, Length 1,307 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-210ENST00000521829 HIDE1A8MVS5 230 aa12.15□□□□□ -0.46
VPS37A-210ENST00000521829 NEMFO60524 1076 aa12.15□□□□□ -0.46
VPS37A-210ENST00000521829 SLITRK3O94933 977 aa12.15□□□□□ -0.46
VPS37A-210ENST00000521829 TXKP42681 527 aa12.15□□□□□ -0.46
VPS37A-210ENST00000521829 GUCY1B3Q02153 619 aa12.15□□□□□ -0.46
VPS37A-210ENST00000521829 CUL4AQ13619 759 aa12.15□□□□□ -0.46
VPS37A-210ENST00000521829 TFDP1Q14186 410 aa12.15□□□□□ -0.46
VPS37A-210ENST00000521829 TPRNQ4KMQ1 711 aa12.15□□□□□ -0.46
VPS37A-210ENST00000521829 ANKRD54Q6NXT1 300 aa12.15□□□□□ -0.46
VPS37A-210ENST00000521829 TMEM184AQ6ZMB5 413 aa12.15□□□□□ -0.46
VPS37A-210ENST00000521829 FERMT3Q86UX7 667 aa12.15□□□□□ -0.46
VPS37A-210ENST00000521829 MRPL43Q8N983 215 aaKnown RBP12.15□□□□□ -0.46
VPS37A-210ENST00000521829 RNF149Q8NC42 400 aa12.15□□□□□ -0.46
VPS37A-210ENST00000521829 CASP10Q92851 521 aa12.15□□□□□ -0.46
VPS37A-210ENST00000521829 PHF7Q9BWX1 381 aaPredicted RBP12.15□□□□□ -0.46
VPS37A-210ENST00000521829 GBP3Q9H0R5 595 aa12.15□□□□□ -0.46
VPS37A-210ENST00000521829 ANKEF1Q9NU02 776 aa12.15□□□□□ -0.46
VPS37A-210ENST00000521829 KANSL3Q9P2N6 904 aa12.15□□□□□ -0.46
VPS37A-210ENST00000521829 MUTYHQ9UIF7 546 aa12.15□□□□□ -0.46
VPS37A-210ENST00000521829 SMC3Q9UQE7 1217 aa12.15□□□□□ -0.46
VPS37A-210ENST00000521829 PCDHB2Q9Y5E7 798 aa12.15□□□□□ -0.46
VPS37A-210ENST00000521829 C2orf71A6NGG8 1288 aa12.14□□□□□ -0.47
VPS37A-210ENST00000521829 ZBTB39O15060 712 aa12.14□□□□□ -0.47
VPS37A-210ENST00000521829 OFD1O75665 1012 aa12.14□□□□□ -0.47
VPS37A-210ENST00000521829 HOXB8P17481 243 aaPredicted RBP12.14□□□□□ -0.47
VPS37A-210ENST00000521829 ATP2B1P20020 1258 aa12.14□□□□□ -0.47
VPS37A-210ENST00000521829 GJB2P29033 226 aa12.14□□□□□ -0.47
VPS37A-210ENST00000521829 RBM10P98175 930 aaKnown RBP12.14□□□□□ -0.47
VPS37A-210ENST00000521829 SPIRE1Q08AE8 756 aa12.14□□□□□ -0.47
VPS37A-210ENST00000521829 GIT2Q14161 759 aa12.14□□□□□ -0.47
VPS37A-210ENST00000521829 PCBP1Q15365 356 aaKnown RBP eCLIP12.14□□□□□ -0.47
VPS37A-210ENST00000521829 HERC4Q5GLZ8 1057 aaPredicted RBP12.14□□□□□ -0.47
VPS37A-210ENST00000521829 CES5AQ6NT32 575 aa12.14□□□□□ -0.47
VPS37A-210ENST00000521829 NOSTRINQ8IVI9 506 aa12.14□□□□□ -0.47
VPS37A-210ENST00000521829 VPS52Q8N1B4 723 aa12.14□□□□□ -0.47
VPS37A-210ENST00000521829 CNNM3Q8NE01 707 aa12.14□□□□□ -0.47
VPS37A-210ENST00000521829 VN1R2Q8NFZ6 395 aa12.14□□□□□ -0.47
VPS37A-210ENST00000521829 SNX21Q969T3 373 aa12.14□□□□□ -0.47
VPS37A-210ENST00000521829 RPGRIP1Q96KN7 1286 aa12.14□□□□□ -0.47
VPS37A-210ENST00000521829 TBC1D13Q9NVG8 400 aa12.14□□□□□ -0.47
VPS37A-210ENST00000521829 STK39Q9UEW8 545 aa12.14□□□□□ -0.47
VPS37A-210ENST00000521829 CNTNAP2Q9UHC6 1331 aa12.14□□□□□ -0.47
VPS37A-210ENST00000521829 INO80B-WBP1J3KQ70 363 aa12.13□□□□□ -0.47
VPS37A-210ENST00000521829 K7ELQ4 463 aaPredicted RBP12.13□□□□□ -0.47
VPS37A-210ENST00000521829 DGAT1O75907 488 aa12.13□□□□□ -0.47
VPS37A-210ENST00000521829 LYPLA2O95372 231 aa12.13□□□□□ -0.47
VPS37A-210ENST00000521829 ALDH2P05091 517 aa12.13□□□□□ -0.47
VPS37A-210ENST00000521829 ITGA4P13612 1032 aa12.13□□□□□ -0.47
VPS37A-210ENST00000521829 U2AF2P26368 475 aaKnown RBP eCLIP12.13□□□□□ -0.471e-7■■■□□ 15.7
VPS37A-210ENST00000521829 AXLP30530 894 aa12.13□□□□□ -0.47
VPS37A-210ENST00000521829 MCM7P33993 719 aa12.13□□□□□ -0.47
VPS37A-210ENST00000521829 TRAPPC10P48553 1259 aa12.13□□□□□ -0.47
VPS37A-210ENST00000521829 GNL2Q13823 731 aaKnown RBP12.13□□□□□ -0.47
VPS37A-210ENST00000521829 CBX2Q14781 532 aaPredicted RBP12.13□□□□□ -0.47
VPS37A-210ENST00000521829 MRPL10Q7Z7H8 261 aaKnown RBP12.13□□□□□ -0.47
VPS37A-210ENST00000521829 DDX53Q86TM3 631 aaKnown RBP12.13□□□□□ -0.47
VPS37A-210ENST00000521829 HACE1Q8IYU2 909 aa12.13□□□□□ -0.47
VPS37A-210ENST00000521829 INTS4Q96HW7 963 aaKnown RBP12.13□□□□□ -0.47
VPS37A-210ENST00000521829 HSD17B14Q9BPX1 270 aa12.13□□□□□ -0.47
VPS37A-210ENST00000521829 APOL5Q9BWW9 433 aa12.13□□□□□ -0.47
VPS37A-210ENST00000521829 NRDE2Q9H7Z3 1164 aa12.13□□□□□ -0.47
VPS37A-210ENST00000521829 RSAD1Q9HA92 442 aa12.13□□□□□ -0.47
VPS37A-210ENST00000521829 UBN1Q9NPG3 1134 aa12.13□□□□□ -0.47
VPS37A-210ENST00000521829 ARID2Q68CP9 1835 aa12.13□□□□□ -0.47
VPS37A-210ENST00000521829 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.12□□□□□ -0.47
VPS37A-210ENST00000521829 LOC730098B7Z3J9 87 aa12.12□□□□□ -0.47
VPS37A-210ENST00000521829 H3BQV1 296 aa12.12□□□□□ -0.47
VPS37A-210ENST00000521829 CLASP2O75122 1294 aaKnown RBP12.12□□□□□ -0.47
VPS37A-210ENST00000521829 GALTP07902 379 aa12.12□□□□□ -0.47
VPS37A-210ENST00000521829 XRCC6P12956 609 aaKnown RBP eCLIP12.12□□□□□ -0.474e-6■■■■□ 25.4
VPS37A-210ENST00000521829 HOXA11P31270 313 aaPredicted RBP12.12□□□□□ -0.47
VPS37A-210ENST00000521829 POU5F1BQ06416 359 aa12.12□□□□□ -0.47
VPS37A-210ENST00000521829 ORC2Q13416 577 aaPredicted RBP12.12□□□□□ -0.47
VPS37A-210ENST00000521829 KCNC3Q14003 757 aa12.12□□□□□ -0.47
VPS37A-210ENST00000521829 NOTUMQ6P988 496 aa12.12□□□□□ -0.47
VPS37A-210ENST00000521829 AGMOQ6ZNB7 445 aa12.12□□□□□ -0.47
VPS37A-210ENST00000521829 SUSD6Q92537 303 aa12.12□□□□□ -0.47
VPS37A-210ENST00000521829 EDAQ92838 391 aa12.12□□□□□ -0.47
VPS37A-210ENST00000521829 CCDC51Q96ER9 411 aa12.12□□□□□ -0.47
VPS37A-210ENST00000521829 IGSF21Q96ID5 467 aa12.12□□□□□ -0.47
VPS37A-210ENST00000521829 MFSD14AQ96MC6 490 aa12.12□□□□□ -0.47
VPS37A-210ENST00000521829 TRIM6Q9C030 488 aaPredicted RBP12.12□□□□□ -0.47
VPS37A-210ENST00000521829 S1PR5Q9H228 398 aa12.12□□□□□ -0.47
VPS37A-210ENST00000521829 MINDY3Q9H8M7 445 aa12.12□□□□□ -0.47
VPS37A-210ENST00000521829 FAN1Q9Y2M0 1017 aa12.12□□□□□ -0.47
VPS37A-210ENST00000521829 NR2E1Q9Y466 385 aa12.12□□□□□ -0.47
VPS37A-210ENST00000521829 HCFC2Q9Y5Z7 792 aa12.12□□□□□ -0.47
VPS37A-210ENST00000521829 SPDYE4A6NLX3 237 aa12.11□□□□□ -0.47
VPS37A-210ENST00000521829 MEIS3P2A8K0S8 358 aa12.11□□□□□ -0.47
VPS37A-210ENST00000521829 NR1I2O75469 434 aa12.11□□□□□ -0.47
VPS37A-210ENST00000521829 CTSAP10619 480 aa12.11□□□□□ -0.47
VPS37A-210ENST00000521829 NCLP19338 710 aaKnown RBP12.11□□□□□ -0.47
VPS37A-210ENST00000521829 PDCP20941 246 aa12.11□□□□□ -0.47
VPS37A-210ENST00000521829 SLC11A1P49279 550 aa12.11□□□□□ -0.47
VPS37A-210ENST00000521829 PTENP60484 403 aa12.11□□□□□ -0.47
VPS37A-210ENST00000521829 ITIH3Q06033 890 aa12.11□□□□□ -0.47
VPS37A-210ENST00000521829 LARP1BQ659C4 914 aaKnown RBP12.11□□□□□ -0.47
VPS37A-210ENST00000521829 SYCE2Q6PIF2 218 aa12.11□□□□□ -0.47
VPS37A-210ENST00000521829 ZBTB33Q86T24 672 aa12.11□□□□□ -0.47
VPS37A-210ENST00000521829 PPFIBP1Q86W92 1011 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms