RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 SEPT4O43236 478 aa6.73□□□□□ -1.33
FAM49B-218ENST00000520887 CYTH3O43739 400 aa6.73□□□□□ -1.33
FAM49B-218ENST00000520887 ADAMTS4O75173 837 aa6.73□□□□□ -1.33
FAM49B-218ENST00000520887 WNT11O96014 354 aa6.73□□□□□ -1.33
FAM49B-218ENST00000520887 TFRCP02786 760 aaKnown RBP6.73□□□□□ -1.33
FAM49B-218ENST00000520887 F13BP05160 661 aa6.73□□□□□ -1.33
FAM49B-218ENST00000520887 P4HBP07237 508 aaKnown RBP6.73□□□□□ -1.33
FAM49B-218ENST00000520887 CCL5P13501 91 aa6.73□□□□□ -1.33
FAM49B-218ENST00000520887 HOXA13P31271 388 aaPredicted RBP6.73□□□□□ -1.33
FAM49B-218ENST00000520887 HSD17B4P51659 736 aa6.73□□□□□ -1.33
FAM49B-218ENST00000520887 ACVR2BQ13705 512 aa6.73□□□□□ -1.33
FAM49B-218ENST00000520887 NONOQ15233 471 aaKnown RBP eCLIP6.73□□□□□ -1.33
FAM49B-218ENST00000520887 ME3Q16798 604 aa6.73□□□□□ -1.33
FAM49B-218ENST00000520887 HP1BP3Q5SSJ5 553 aaPredicted RBP6.73□□□□□ -1.33
FAM49B-218ENST00000520887 MAMDC4Q6UXC1 1216 aa6.73□□□□□ -1.33
FAM49B-218ENST00000520887 FAM133AQ8N9E0 248 aa6.73□□□□□ -1.33
FAM49B-218ENST00000520887 NPLOC4Q8TAT6 608 aa6.73□□□□□ -1.33
FAM49B-218ENST00000520887 SYTL5Q8TDW5 730 aaPredicted RBP6.73□□□□□ -1.33
FAM49B-218ENST00000520887 TNPO1Q92973 898 aaKnown RBP6.73□□□□□ -1.33
FAM49B-218ENST00000520887 ARMC5Q96C12 935 aa6.73□□□□□ -1.33
FAM49B-218ENST00000520887 ABHD8Q96I13 439 aa6.73□□□□□ -1.33
FAM49B-218ENST00000520887 YIPF2Q9BWQ6 316 aa6.73□□□□□ -1.33
FAM49B-218ENST00000520887 OSBPL1AQ9BXW6 950 aa6.73□□□□□ -1.33
FAM49B-218ENST00000520887 ANO3Q9BYT9 981 aa6.73□□□□□ -1.33
FAM49B-218ENST00000520887 PXMP2Q9NR77 195 aa6.73□□□□□ -1.33
FAM49B-218ENST00000520887 VPS54Q9P1Q0 977 aa6.73□□□□□ -1.33
FAM49B-218ENST00000520887 DDX20Q9UHI6 824 aaKnown RBP6.73□□□□□ -1.33
FAM49B-218ENST00000520887 PCDHA4Q9UN74 947 aa6.73□□□□□ -1.33
FAM49B-218ENST00000520887 MRVI1Q9Y6F6 885 aa6.73□□□□□ -1.33
FAM49B-218ENST00000520887 ZNFX1Q9P2E3 1918 aaKnown RBP6.72□□□□□ -1.33
FAM49B-218ENST00000520887 ZSWIM8A7E2V4 1837 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 DNAJC25-GNG10A0A024R161 153 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 hCG_1642624A0A1W2PR95 340 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 MAFGO15525 162 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 FIBPO43427 364 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 PEX10O60683 326 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 EIF3JO75822 258 aaKnown RBP6.72□□□□□ -1.33
FAM49B-218ENST00000520887 BAG4O95429 457 aaKnown RBP6.72□□□□□ -1.33
FAM49B-218ENST00000520887 CTSBP07858 339 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 GJB1P08034 283 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 ADH5P11766 374 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 GCFC2P16383 781 aaKnown RBP6.72□□□□□ -1.33
FAM49B-218ENST00000520887 CYP2C19P33261 490 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 CPT1AP50416 773 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 NEDD9Q14511 834 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 PCNX4Q63HM2 1172 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 IQSEC1Q6DN90 963 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 EEPD1Q7L9B9 569 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 BLIDQ8IZY5 108 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 NECAB1Q8N987 351 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 PCSK9Q8NBP7 692 aaKnown RBP6.72□□□□□ -1.33
FAM49B-218ENST00000520887 CLEC4DQ8WXI8 215 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 USP6NLQ92738 828 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 TMX3Q96JJ7 454 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 ZNF333Q96JL9 665 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 SDF4Q9BRK5 362 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 HTATIP2Q9BUP3 242 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 ZMYND12Q9H0C1 365 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 DNAJC25Q9H1X3 360 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 MLXIPQ9HAP2 919 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 NPHS2Q9NP85 383 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 XPNPEP3Q9NQH7 507 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 RAD18Q9NS91 495 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 GJD2Q9UKL4 321 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 PCDHA6Q9UN73 950 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 PCDHA8Q9Y5H6 950 aa6.72□□□□□ -1.33
FAM49B-218ENST00000520887 EIF1AYO14602 144 aaKnown RBP6.71□□□□□ -1.34
FAM49B-218ENST00000520887 KPNA6O60684 536 aa6.71□□□□□ -1.34
FAM49B-218ENST00000520887 DUSP11O75319 330 aaKnown RBP6.71□□□□□ -1.34
FAM49B-218ENST00000520887 B3GALT4O96024 378 aa6.71□□□□□ -1.34
FAM49B-218ENST00000520887 GH1P01241 217 aa6.71□□□□□ -1.34
FAM49B-218ENST00000520887 C6orf222P0C671 652 aaPredicted RBP6.71□□□□□ -1.34
FAM49B-218ENST00000520887 TXNP10599 105 aaKnown RBP6.71□□□□□ -1.34
FAM49B-218ENST00000520887 TGFB3P10600 412 aa6.71□□□□□ -1.34
FAM49B-218ENST00000520887 CYBAP13498 195 aa6.71□□□□□ -1.34
FAM49B-218ENST00000520887 ITPKAP23677 461 aa6.71□□□□□ -1.34
FAM49B-218ENST00000520887 CTGFP29279 349 aa6.71□□□□□ -1.34
FAM49B-218ENST00000520887 MAPK8P45983 427 aa6.71□□□□□ -1.34
FAM49B-218ENST00000520887 CNTN2Q02246 1040 aa6.71□□□□□ -1.34
FAM49B-218ENST00000520887 GHRHRQ02643 423 aa6.71□□□□□ -1.34
FAM49B-218ENST00000520887 TNFAIP2Q03169 654 aa6.71□□□□□ -1.34
FAM49B-218ENST00000520887 CACNB2Q08289 660 aaPredicted RBP6.71□□□□□ -1.34
FAM49B-218ENST00000520887 MTMR1Q13613 665 aa6.71□□□□□ -1.34
FAM49B-218ENST00000520887 PGM5Q15124 567 aa6.71□□□□□ -1.34
FAM49B-218ENST00000520887 ENOX2Q16206 610 aaKnown RBP6.71□□□□□ -1.34
FAM49B-218ENST00000520887 CCL14Q16627 93 aa6.71□□□□□ -1.34
FAM49B-218ENST00000520887 CPSF6Q16630 551 aaKnown RBP eCLIP6.71□□□□□ -1.34
FAM49B-218ENST00000520887 UBE2SQ16763 222 aa6.71□□□□□ -1.34
FAM49B-218ENST00000520887 JAKMIP3Q5VZ66 844 aa6.71□□□□□ -1.34
FAM49B-218ENST00000520887 USP17L6PQ6QN14 398 aa6.71□□□□□ -1.34
FAM49B-218ENST00000520887 SEPT14Q6ZU15 432 aa6.71□□□□□ -1.34
FAM49B-218ENST00000520887 NEK8Q86SG6 692 aa6.71□□□□□ -1.34
FAM49B-218ENST00000520887 TLK2Q86UE8 772 aa6.71□□□□□ -1.34
FAM49B-218ENST00000520887 FBXO16Q8IX29 292 aaPredicted RBP6.71□□□□□ -1.34
FAM49B-218ENST00000520887 DHX37Q8IY37 1157 aaKnown RBP6.71□□□□□ -1.34
FAM49B-218ENST00000520887 DAGLBQ8NCG7 672 aa6.71□□□□□ -1.34
FAM49B-218ENST00000520887 NSUN7Q8NE18 718 aaKnown RBP6.71□□□□□ -1.34
FAM49B-218ENST00000520887 OR6J1Q8NGC5 347 aa6.71□□□□□ -1.34
FAM49B-218ENST00000520887 U2AF1L4Q8WU68 220 aaKnown RBP6.71□□□□□ -1.34
FAM49B-218ENST00000520887 EZH1Q92800 747 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms