RNA–Protein interactions for RNA: ENST00000520790.1

PCDHGB6-201, Transcript of protocadherin gamma subfamily B, 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB6, Length 4,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6-201ENST00000520790 SUDS3Q9H7L9 328 aaPredicted RBP12.76□□□□□ -0.37
PCDHGB6-201ENST00000520790 TLE6Q9H808 572 aa12.76□□□□□ -0.37
PCDHGB6-201ENST00000520790 NOLC1Q14978 699 aaKnown RBP eCLIP12.76□□□□□ -0.37
PCDHGB6-201ENST00000520790 CLUL1Q15846 466 aa12.76□□□□□ -0.37
PCDHGB6-201ENST00000520790 AMHR2Q16671 573 aa12.76□□□□□ -0.37
PCDHGB6-201ENST00000520790 FAM171A1Q5VUB5 890 aa12.76□□□□□ -0.37
PCDHGB6-201ENST00000520790 SFMBT2Q5VUG0 894 aa12.76□□□□□ -0.37
PCDHGB6-201ENST00000520790 RWDD4Q6NW29 188 aaKnown RBP12.76□□□□□ -0.37
PCDHGB6-201ENST00000520790 RDM1Q8NG50 284 aa12.76□□□□□ -0.37
PCDHGB6-201ENST00000520790 KIF18AQ8NI77 898 aa12.76□□□□□ -0.37
PCDHGB6-201ENST00000520790 ZNF558Q96NG5 402 aa12.76□□□□□ -0.37
PCDHGB6-201ENST00000520790 TMEM60Q9H2L4 133 aa12.76□□□□□ -0.37
PCDHGB6-201ENST00000520790 SYNDIG1Q9H7V2 258 aa12.76□□□□□ -0.37
PCDHGB6-201ENST00000520790 NGRNQ9NPE2 291 aaKnown RBP12.76□□□□□ -0.37
PCDHGB6-201ENST00000520790 KCNJ18B7U540 433 aa12.76□□□□□ -0.37
PCDHGB6-201ENST00000520790 NT5C1B-RDH14C9J2C7 533 aa12.76□□□□□ -0.37
PCDHGB6-201ENST00000520790 SLC37A4O43826 429 aa12.76□□□□□ -0.37
PCDHGB6-201ENST00000520790 KCNJ12Q14500 433 aa12.76□□□□□ -0.37
PCDHGB6-201ENST00000520790 HS1BP3Q53T59 392 aa12.76□□□□□ -0.37
PCDHGB6-201ENST00000520790 P2RX5Q93086 422 aa12.76□□□□□ -0.37
PCDHGB6-201ENST00000520790 ZBTB9Q96C00 473 aa12.76□□□□□ -0.37
PCDHGB6-201ENST00000520790 ANKEF1Q9NU02 776 aa12.76□□□□□ -0.37
PCDHGB6-201ENST00000520790 TRMT13Q9NUP7 481 aaKnown RBP12.76□□□□□ -0.37
PCDHGB6-201ENST00000520790 SEPT10Q9P0V9 454 aa12.76□□□□□ -0.37
PCDHGB6-201ENST00000520790 UNCXA6NJT0 531 aa12.75□□□□□ -0.37
PCDHGB6-201ENST00000520790 CLTBP09497 229 aa12.75□□□□□ -0.37
PCDHGB6-201ENST00000520790 CDO1Q16878 200 aa12.75□□□□□ -0.37
PCDHGB6-201ENST00000520790 HSDL1Q3SXM5 330 aa12.75□□□□□ -0.37
PCDHGB6-201ENST00000520790 NOL9Q5SY16 702 aaKnown RBP12.75□□□□□ -0.37
PCDHGB6-201ENST00000520790 DCP1BQ8IZD4 617 aaKnown RBP12.75□□□□□ -0.37
PCDHGB6-201ENST00000520790 PHF20Q9BVI0 1012 aa12.75□□□□□ -0.37
PCDHGB6-201ENST00000520790 EMILIN2Q9BXX0 1053 aa12.75□□□□□ -0.37
PCDHGB6-201ENST00000520790 CLSTN2Q9H4D0 955 aa12.75□□□□□ -0.37
PCDHGB6-201ENST00000520790 ESYT2A0FGR8 921 aa12.75□□□□□ -0.37
PCDHGB6-201ENST00000520790 RBP5P82980 135 aa12.75□□□□□ -0.37
PCDHGB6-201ENST00000520790 CCDC122Q5T0U0 273 aa12.75□□□□□ -0.37
PCDHGB6-201ENST00000520790 BBS5Q8N3I7 341 aa12.75□□□□□ -0.37
PCDHGB6-201ENST00000520790 CNOT6LQ96LI5 555 aaKnown RBP12.75□□□□□ -0.37
PCDHGB6-201ENST00000520790 A6NJR5 290 aa12.75□□□□□ -0.37
PCDHGB6-201ENST00000520790 STK10O94804 968 aaKnown RBP12.75□□□□□ -0.37
PCDHGB6-201ENST00000520790 ATP2A2P16615 1042 aaKnown RBP12.75□□□□□ -0.37
PCDHGB6-201ENST00000520790 NLRP12P59046 1061 aa12.75□□□□□ -0.37
PCDHGB6-201ENST00000520790 TMEM270Q6UE05 265 aa12.75□□□□□ -0.37
PCDHGB6-201ENST00000520790 TNIP3Q96KP6 325 aa12.75□□□□□ -0.37
PCDHGB6-201ENST00000520790 GSDMAQ96QA5 445 aa12.75□□□□□ -0.37
PCDHGB6-201ENST00000520790 KANSL3Q9P2N6 904 aa12.75□□□□□ -0.37
PCDHGB6-201ENST00000520790 SH3BP1Q9Y3L3 701 aa12.75□□□□□ -0.37
PCDHGB6-201ENST00000520790 POLR3GO15318 223 aaPredicted RBP12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 CD4P01730 458 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 AFPP02771 609 aaKnown RBP12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 SELPP16109 830 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 WEE1P30291 646 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 COASYQ13057 564 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 LDLRAD1Q5T700 205 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 DDX53Q86TM3 631 aaKnown RBP12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 GAD1Q99259 594 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 SIK2Q9H0K1 926 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 LSM7Q9UK45 103 aaKnown RBP12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 TIMM13Q9Y5L4 95 aaPredicted RBP12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 MED7O43513 233 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 GAS2O43903 313 aaKnown RBP12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 TACC1O75410 805 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 CYBBP04839 570 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 CYP11B2P19099 503 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 GSDMDP57764 484 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 TRIM60Q495X7 471 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 PPP1R21Q6ZMI0 780 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 INTS8Q75QN2 995 aaKnown RBP12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 GPD1LQ8N335 351 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 SELENOOQ9BVL4 669 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 SEL1LQ9UBV2 794 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 DBR1Q9UK59 544 aaKnown RBP12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 MOXD2PA6NHM9 499 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 NR3C1P04150 777 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 CUL4BQ13620 913 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 KYAT1Q16773 422 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 TSGA10IPQ3SY00 556 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 ZNF697Q5TEC3 545 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 TYW1BQ6NUM6 668 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 IL31RAQ8NI17 732 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 MRPS31Q92665 395 aaKnown RBP12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 MRPL9Q9BYD2 267 aaKnown RBP12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 IKBKGQ9Y6K9 419 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 FAM169AQ9Y6X4 670 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 PDIA5Q14554 519 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 CHRDL2Q6WN34 429 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 CATSPER3Q86XQ3 398 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 HPS3Q969F9 1004 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 RSAD1Q9HA92 442 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 GCNT4Q9P109 453 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 TXNDC16Q9P2K2 825 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 USP20Q9Y2K6 914 aa12.74□□□□□ -0.37
PCDHGB6-201ENST00000520790 ERLIN1O75477 346 aa12.73□□□□□ -0.37
PCDHGB6-201ENST00000520790 TRIM49P0CI25 452 aa12.73□□□□□ -0.37
PCDHGB6-201ENST00000520790 TRIM49CP0CI26 452 aa12.73□□□□□ -0.37
PCDHGB6-201ENST00000520790 EIF4BP23588 611 aaKnown RBP12.73□□□□□ -0.37
PCDHGB6-201ENST00000520790 PCSK1P29120 753 aa12.73□□□□□ -0.37
PCDHGB6-201ENST00000520790 AVPR1AP37288 418 aa12.73□□□□□ -0.37
PCDHGB6-201ENST00000520790 EPHB1P54762 984 aa12.73□□□□□ -0.37
PCDHGB6-201ENST00000520790 GNG11P61952 73 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms