RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 FOSBP53539 338 aa16.92■□□□□ 0.3
CSMD1-207ENST00000520451 ITIH3Q06033 890 aa16.92■□□□□ 0.3
CSMD1-207ENST00000520451 CALCRLQ16602 461 aa16.92■□□□□ 0.3
CSMD1-207ENST00000520451 UBXN11Q5T124 520 aa16.92■□□□□ 0.3
CSMD1-207ENST00000520451 CES5AQ6NT32 575 aa16.92■□□□□ 0.3
CSMD1-207ENST00000520451 MRPL10Q7Z7H8 261 aaKnown RBP16.92■□□□□ 0.3
CSMD1-207ENST00000520451 ZNF280BQ86YH2 543 aa16.92■□□□□ 0.3
CSMD1-207ENST00000520451 NSUN7Q8NE18 718 aaKnown RBP16.92■□□□□ 0.3
CSMD1-207ENST00000520451 PBXIP1Q96AQ6 731 aa16.92■□□□□ 0.3
CSMD1-207ENST00000520451 MTRQ99707 1265 aa16.92■□□□□ 0.3
CSMD1-207ENST00000520451 EIF2AK1Q9BQI3 630 aaKnown RBP16.92■□□□□ 0.3
CSMD1-207ENST00000520451 ADAM7Q9H2U9 754 aa16.92■□□□□ 0.3
CSMD1-207ENST00000520451 RSAD1Q9HA92 442 aa16.92■□□□□ 0.3
CSMD1-207ENST00000520451 TSHZ2Q9NRE2 1034 aa16.92■□□□□ 0.3
CSMD1-207ENST00000520451 PPP4R2Q9NY27 417 aa16.92■□□□□ 0.3
CSMD1-207ENST00000520451 CNTNAP2Q9UHC6 1331 aa16.92■□□□□ 0.3
CSMD1-207ENST00000520451 B4GALT3O60512 393 aa16.91■□□□□ 0.3
CSMD1-207ENST00000520451 ERLIN2O94905 339 aa16.91■□□□□ 0.3
CSMD1-207ENST00000520451 SLITRK3O94933 977 aa16.91■□□□□ 0.3
CSMD1-207ENST00000520451 CTSAP10619 480 aa16.91■□□□□ 0.3
CSMD1-207ENST00000520451 GIT2Q14161 759 aa16.91■□□□□ 0.3
CSMD1-207ENST00000520451 PTPN21Q16825 1174 aa16.91■□□□□ 0.3
CSMD1-207ENST00000520451 BMP8AQ7Z5Y6 402 aa16.91■□□□□ 0.3
CSMD1-207ENST00000520451 ZBTB33Q86T24 672 aa16.91■□□□□ 0.3
CSMD1-207ENST00000520451 CCDC43Q96MW1 224 aaKnown RBP16.91■□□□□ 0.3
CSMD1-207ENST00000520451 NECTIN4Q96NY8 510 aa16.91■□□□□ 0.3
CSMD1-207ENST00000520451 XPNPEP1Q9NQW7 623 aa16.91■□□□□ 0.3
CSMD1-207ENST00000520451 DZANK1Q9NVP4 752 aa16.91■□□□□ 0.3
CSMD1-207ENST00000520451 PCDHA12Q9UN75 941 aa16.91■□□□□ 0.3
CSMD1-207ENST00000520451 NR2E1Q9Y466 385 aa16.91■□□□□ 0.3
CSMD1-207ENST00000520451 ZNF318Q5VUA4 2279 aa16.91■□□□□ 0.3
CSMD1-207ENST00000520451 BTBD18B2RXH4 712 aa16.9■□□□□ 0.3
CSMD1-207ENST00000520451 NEMFO60524 1076 aa16.9■□□□□ 0.3
CSMD1-207ENST00000520451 JAK2O60674 1132 aa16.9■□□□□ 0.3
CSMD1-207ENST00000520451 DDHD2O94830 711 aa16.9■□□□□ 0.3
CSMD1-207ENST00000520451 EPCAMP16422 314 aa16.9■□□□□ 0.3
CSMD1-207ENST00000520451 AFF1P51825 1210 aaKnown RBP16.9■□□□□ 0.3
CSMD1-207ENST00000520451 NHLH1Q02575 133 aa16.9■□□□□ 0.3
CSMD1-207ENST00000520451 SIGLEC14Q08ET2 396 aa16.9■□□□□ 0.3
CSMD1-207ENST00000520451 TRIM29Q14134 588 aa16.9■□□□□ 0.3
CSMD1-207ENST00000520451 MXD4Q14582 209 aaPredicted RBP16.9■□□□□ 0.3
CSMD1-207ENST00000520451 RARS2Q5T160 578 aaKnown RBP16.9■□□□□ 0.3
CSMD1-207ENST00000520451 SUGP1Q8IWZ8 645 aaKnown RBP16.9■□□□□ 0.3
CSMD1-207ENST00000520451 DIS3L2Q8IYB7 885 aaKnown RBP16.9■□□□□ 0.3
CSMD1-207ENST00000520451 C12orf76Q8N812 135 aaPredicted RBP16.9■□□□□ 0.3
CSMD1-207ENST00000520451 FAM193BQ96PV7 902 aaPredicted RBP16.9■□□□□ 0.3
CSMD1-207ENST00000520451 VN1R3Q9BXE9 311 aa16.9■□□□□ 0.3
CSMD1-207ENST00000520451 POMKQ9H5K3 350 aa16.9■□□□□ 0.3
CSMD1-207ENST00000520451 TTC12Q9H892 705 aaPredicted RBP16.9■□□□□ 0.3
CSMD1-207ENST00000520451 KANSL3Q9P2N6 904 aa16.9■□□□□ 0.3
CSMD1-207ENST00000520451 IRAK3Q9Y616 596 aa16.9■□□□□ 0.3
CSMD1-207ENST00000520451 INO80B-WBP1J3KQ70 363 aa16.89■□□□□ 0.29
CSMD1-207ENST00000520451 WNT7AO00755 349 aa16.89■□□□□ 0.29
CSMD1-207ENST00000520451 TSPAN1O60635 241 aa16.89■□□□□ 0.29
CSMD1-207ENST00000520451 LYPLA2O95372 231 aa16.89■□□□□ 0.29
CSMD1-207ENST00000520451 POMCP01189 267 aa16.89■□□□□ 0.29
CSMD1-207ENST00000520451 WEE2P0C1S8 567 aa16.89■□□□□ 0.29
CSMD1-207ENST00000520451 ITGA4P13612 1032 aa16.89■□□□□ 0.29
CSMD1-207ENST00000520451 NCLP19338 710 aaKnown RBP16.89■□□□□ 0.29
CSMD1-207ENST00000520451 TXKP42681 527 aa16.89■□□□□ 0.29
CSMD1-207ENST00000520451 MTHFRP42898 656 aa16.89■□□□□ 0.29
CSMD1-207ENST00000520451 NEK4P51957 841 aa16.89■□□□□ 0.29
CSMD1-207ENST00000520451 PTENP60484 403 aa16.89■□□□□ 0.29
CSMD1-207ENST00000520451 TFDP1Q14186 410 aa16.89■□□□□ 0.29
CSMD1-207ENST00000520451 PTPN14Q15678 1187 aa16.89■□□□□ 0.29
CSMD1-207ENST00000520451 ALYREFQ86V81 257 aaKnown RBP16.89■□□□□ 0.29
CSMD1-207ENST00000520451 RIPOR3Q96MK2 946 aa16.89■□□□□ 0.29
CSMD1-207ENST00000520451 HSD17B14Q9BPX1 270 aa16.89■□□□□ 0.29
CSMD1-207ENST00000520451 TMEM175Q9BSA9 504 aa16.89■□□□□ 0.29
CSMD1-207ENST00000520451 EIF2AQ9BY44 585 aaKnown RBP16.89■□□□□ 0.29
CSMD1-207ENST00000520451 ANKEF1Q9NU02 776 aa16.89■□□□□ 0.29
CSMD1-207ENST00000520451 FAN1Q9Y2M0 1017 aa16.89■□□□□ 0.29
CSMD1-207ENST00000520451 ARID2Q68CP9 1835 aa16.89■□□□□ 0.29
CSMD1-207ENST00000520451 C2CD4DB7Z1M9 353 aa16.88■□□□□ 0.29
CSMD1-207ENST00000520451 DGAT1O75907 488 aa16.88■□□□□ 0.29
CSMD1-207ENST00000520451 ALDH2P05091 517 aa16.88■□□□□ 0.29
CSMD1-207ENST00000520451 SSBP05455 408 aaKnown RBP eCLIP16.88■□□□□ 0.29
CSMD1-207ENST00000520451 AXLP30530 894 aa16.88■□□□□ 0.29
CSMD1-207ENST00000520451 NCBP1Q09161 790 aaKnown RBP16.88■□□□□ 0.29
CSMD1-207ENST00000520451 PCBP1Q15365 356 aaKnown RBP eCLIP16.88■□□□□ 0.29
CSMD1-207ENST00000520451 KANK3Q6NY19 840 aa16.88■□□□□ 0.29
CSMD1-207ENST00000520451 NOTUMQ6P988 496 aa16.88■□□□□ 0.29
CSMD1-207ENST00000520451 CABP7Q86V35 215 aa16.88■□□□□ 0.29
CSMD1-207ENST00000520451 SMG8Q8ND04 991 aaKnown RBP16.88■□□□□ 0.29
CSMD1-207ENST00000520451 CNNM3Q8NE01 707 aa16.88■□□□□ 0.29
CSMD1-207ENST00000520451 ASAP3Q8TDY4 903 aa16.88■□□□□ 0.29
CSMD1-207ENST00000520451 SLC22A17Q8WUG5 538 aa16.88■□□□□ 0.29
CSMD1-207ENST00000520451 CCDC51Q96ER9 411 aa16.88■□□□□ 0.29
CSMD1-207ENST00000520451 CPB2Q96IY4 423 aa16.88■□□□□ 0.29
CSMD1-207ENST00000520451 UBN1Q9NPG3 1134 aa16.88■□□□□ 0.29
CSMD1-207ENST00000520451 STK39Q9UEW8 545 aa16.88■□□□□ 0.29
CSMD1-207ENST00000520451 IPPQ9Y573 584 aa16.88■□□□□ 0.29
CSMD1-207ENST00000520451 NRP1O14786 923 aa16.87■□□□□ 0.29
CSMD1-207ENST00000520451 CAPSQ13938 189 aa16.87■□□□□ 0.29
CSMD1-207ENST00000520451 ATAT1Q5SQI0 421 aa16.87■□□□□ 0.29
CSMD1-207ENST00000520451 KIAA1841Q6NSI8 718 aa16.87■□□□□ 0.29
CSMD1-207ENST00000520451 PPFIBP1Q86W92 1011 aa16.87■□□□□ 0.29
CSMD1-207ENST00000520451 FBXL6Q8N531 539 aa16.87■□□□□ 0.29
CSMD1-207ENST00000520451 PIGOQ8TEQ8 1089 aa16.87■□□□□ 0.29
CSMD1-207ENST00000520451 ASIC4Q96FT7 647 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms