RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 EPHB4P54760 987 aa4.42□□□□□ -1.7
HMGB1P41-201ENST00000520234 RRADP55042 308 aa4.42□□□□□ -1.7
HMGB1P41-201ENST00000520234 INHBEP58166 350 aa4.42□□□□□ -1.7
HMGB1P41-201ENST00000520234 MEF2AQ02078 507 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P41-201ENST00000520234 MUM1Q2TAK8 710 aa4.42□□□□□ -1.7
HMGB1P41-201ENST00000520234 CLEC14AQ86T13 490 aa4.42□□□□□ -1.7
HMGB1P41-201ENST00000520234 UNC5BQ8IZJ1 945 aa4.42□□□□□ -1.7
HMGB1P41-201ENST00000520234 FATE1Q969F0 183 aa4.42□□□□□ -1.7
HMGB1P41-201ENST00000520234 FUBP3Q96I24 572 aaKnown RBP eCLIP4.42□□□□□ -1.7
HMGB1P41-201ENST00000520234 ZNF747Q9BV97 191 aa4.42□□□□□ -1.7
HMGB1P41-201ENST00000520234 KIAA1683Q9H0B3 1180 aa4.42□□□□□ -1.7
HMGB1P41-201ENST00000520234 QRSL1Q9H0R6 528 aaKnown RBP4.42□□□□□ -1.7
HMGB1P41-201ENST00000520234 VPS11Q9H270 941 aa4.42□□□□□ -1.7
HMGB1P41-201ENST00000520234 SLC6A15Q9H2J7 730 aa4.42□□□□□ -1.7
HMGB1P41-201ENST00000520234 IFT122Q9HBG6 1241 aa4.42□□□□□ -1.7
HMGB1P41-201ENST00000520234 ZNF277Q9NRM2 450 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P41-201ENST00000520234 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.42□□□□□ -1.7
HMGB1P41-201ENST00000520234 DPP7Q9UHL4 492 aa4.42□□□□□ -1.7
HMGB1P41-201ENST00000520234 EDARQ9UNE0 448 aa4.42□□□□□ -1.7
HMGB1P41-201ENST00000520234 INVSQ9Y283 1065 aa4.42□□□□□ -1.7
HMGB1P41-201ENST00000520234 PTPN22Q9Y2R2 807 aa4.42□□□□□ -1.7
HMGB1P41-201ENST00000520234 NR2E1Q9Y466 385 aa4.42□□□□□ -1.7
HMGB1P41-201ENST00000520234 GPR45Q9Y5Y3 372 aa4.42□□□□□ -1.7
HMGB1P41-201ENST00000520234 KLHL33A6NCF5 533 aa4.41□□□□□ -1.7
HMGB1P41-201ENST00000520234 LAMTOR5O43504 91 aa4.41□□□□□ -1.7
HMGB1P41-201ENST00000520234 IARSP41252 1262 aaKnown RBP4.41□□□□□ -1.7
HMGB1P41-201ENST00000520234 RAC3P60763 192 aa4.41□□□□□ -1.7
HMGB1P41-201ENST00000520234 SRSF2Q01130 221 aaKnown RBP4.41□□□□□ -1.7
HMGB1P41-201ENST00000520234 KLF10Q13118 480 aa4.41□□□□□ -1.7
HMGB1P41-201ENST00000520234 ADAM15Q13444 863 aa4.41□□□□□ -1.7
HMGB1P41-201ENST00000520234 ABCB5Q2M3G0 1257 aa4.41□□□□□ -1.7
HMGB1P41-201ENST00000520234 GAGE13Q4V321 117 aa4.41□□□□□ -1.7
HMGB1P41-201ENST00000520234 TOR2AQ5JU69 321 aa4.41□□□□□ -1.7
HMGB1P41-201ENST00000520234 SLFN13Q68D06 897 aa4.41□□□□□ -1.7
HMGB1P41-201ENST00000520234 FAM180AQ6UWF9 173 aa4.41□□□□□ -1.7
HMGB1P41-201ENST00000520234 GAREM2Q75VX8 874 aa4.41□□□□□ -1.7
HMGB1P41-201ENST00000520234 PLA2G15Q8NCC3 412 aa4.41□□□□□ -1.7
HMGB1P41-201ENST00000520234 CHST13Q8NET6 341 aa4.41□□□□□ -1.7
HMGB1P41-201ENST00000520234 CHMP4CQ96CF2 233 aa4.41□□□□□ -1.7
HMGB1P41-201ENST00000520234 UIMC1Q96RL1 719 aa4.41□□□□□ -1.7
HMGB1P41-201ENST00000520234 FDXACB1Q9BRP7 624 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P41-201ENST00000520234 PRDM12Q9H4Q4 367 aa4.41□□□□□ -1.7
HMGB1P41-201ENST00000520234 C14orf93Q9H972 538 aaKnown RBP4.41□□□□□ -1.7
HMGB1P41-201ENST00000520234 PUF60Q9UHX1 559 aaKnown RBP4.41□□□□□ -1.7
HMGB1P41-201ENST00000520234 EVLQ9UI08 416 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P41-201ENST00000520234 TSC22D4Q9Y3Q8 395 aa4.41□□□□□ -1.7
HMGB1P41-201ENST00000520234 A0A1W2PR48 441 aa4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 MTSS1O43312 755 aa4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 ALDH1L1O75891 902 aa4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 CNOT4O95628 575 aaKnown RBP4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 LY86O95711 162 aa4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 MT-CO1P00395 513 aa4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 JUNP05412 331 aaKnown RBP4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 GAAP10253 952 aa4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 HNRNPLP14866 589 aaKnown RBP eCLIP4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 AGXTP21549 392 aa4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 CCND1P24385 295 aa4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 ADCY7P51828 1080 aa4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 NEK2P51955 445 aa4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 HGFACQ04756 655 aa4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 CD69Q07108 199 aa4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 MGAT5Q09328 741 aa4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 TCIRG1Q13488 830 aa4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 CLUL1Q15846 466 aa4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 PTPN21Q16825 1174 aa4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 RNF151Q2KHN1 245 aa4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 PLEKHG6Q3KR16 790 aa4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 C19orf54Q5BKX5 351 aa4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 MUM1L1Q5H9M0 696 aa4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 MBNL2Q5VZF2 373 aaKnown RBP4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 BTNL9Q6UXG8 535 aa4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 TAS1R1Q7RTX1 841 aa4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 TSPEARQ8WU66 669 aa4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 NEIL1Q96FI4 390 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 ACE2Q9BYF1 805 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 ZBTB21Q9ULJ3 1066 aa4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 RBM8AQ9Y5S9 174 aaKnown RBP4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 TNKSO95271 1327 aa4.4□□□□□ -1.71
HMGB1P41-201ENST00000520234 CCDC180Q9P1Z9 1646 aa4.39□□□□□ -1.71
HMGB1P41-201ENST00000520234 ZCCHC6Q5VYS8 1495 aaKnown RBP4.39□□□□□ -1.71
HMGB1P41-201ENST00000520234 C2orf78A6NCI8 922 aa4.39□□□□□ -1.71
HMGB1P41-201ENST00000520234 FZD9O00144 591 aa4.39□□□□□ -1.71
HMGB1P41-201ENST00000520234 SLC26A4O43511 780 aa4.39□□□□□ -1.71
HMGB1P41-201ENST00000520234 SNUPNO95149 360 aaKnown RBP4.39□□□□□ -1.71
HMGB1P41-201ENST00000520234 PLATP00750 562 aa4.39□□□□□ -1.71
HMGB1P41-201ENST00000520234 LTA4HP09960 611 aaKnown RBP4.39□□□□□ -1.71
HMGB1P41-201ENST00000520234 VSIG10L2P0DP72 767 aa4.39□□□□□ -1.71
HMGB1P41-201ENST00000520234 KIR2DL3P43628 341 aa4.39□□□□□ -1.71
HMGB1P41-201ENST00000520234 EPHB1P54762 984 aa4.39□□□□□ -1.71
HMGB1P41-201ENST00000520234 WNT3AP56704 352 aa4.39□□□□□ -1.71
HMGB1P41-201ENST00000520234 TGFB2P61812 414 aa4.39□□□□□ -1.71
HMGB1P41-201ENST00000520234 CDK17Q00537 523 aa4.39□□□□□ -1.71
HMGB1P41-201ENST00000520234 ACAP2Q15057 778 aa4.39□□□□□ -1.71
HMGB1P41-201ENST00000520234 ADRM1Q16186 407 aa4.39□□□□□ -1.71
HMGB1P41-201ENST00000520234 TBR1Q16650 682 aa4.39□□□□□ -1.71
HMGB1P41-201ENST00000520234 ZBTB46Q86UZ6 589 aa4.39□□□□□ -1.71
HMGB1P41-201ENST00000520234 PNMA8AQ86V59 439 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P41-201ENST00000520234 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.39□□□□□ -1.71
HMGB1P41-201ENST00000520234 OR14K1Q8NGZ2 314 aa4.39□□□□□ -1.71
HMGB1P41-201ENST00000520234 RABGGTAQ92696 567 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms