RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 KATNAL1Q9BW62 490 aa15.84■□□□□ 0.13
CLN8-204ENST00000519254 GBP3Q9H0R5 595 aa15.84■□□□□ 0.13
CLN8-204ENST00000519254 MMRN2Q9H8L6 949 aa15.84■□□□□ 0.13
CLN8-204ENST00000519254 FAM207AQ9NSI2 230 aaPredicted RBP15.84■□□□□ 0.13
CLN8-204ENST00000519254 SETD4Q9NVD3 440 aa15.84■□□□□ 0.13
CLN8-204ENST00000519254 DMAC2Q9NW81 257 aa15.84■□□□□ 0.13
CLN8-204ENST00000519254 ARMCX3Q9UH62 379 aaPredicted RBP15.84■□□□□ 0.13
CLN8-204ENST00000519254 COL1A2P08123 1366 aa15.83■□□□□ 0.13
CLN8-204ENST00000519254 HTTP42858 3142 aa15.83■□□□□ 0.12
CLN8-204ENST00000519254 KIF2AO00139 706 aaPredicted RBP15.83■□□□□ 0.12
CLN8-204ENST00000519254 KLRC1P26715 233 aa15.83■□□□□ 0.12
CLN8-204ENST00000519254 NPTX2P47972 431 aa15.83■□□□□ 0.12
CLN8-204ENST00000519254 LBX1P52954 281 aa15.83■□□□□ 0.12
CLN8-204ENST00000519254 KCNH2Q12809 1159 aa15.83■□□□□ 0.12
CLN8-204ENST00000519254 EFCAB12Q6NXP0 572 aa15.83■□□□□ 0.12
CLN8-204ENST00000519254 TRIM65Q6PJ69 517 aa15.83■□□□□ 0.12
CLN8-204ENST00000519254 MTG1Q9BT17 334 aaPredicted RBP15.83■□□□□ 0.12
CLN8-204ENST00000519254 ST6GALNAC4Q9H4F1 302 aa15.83■□□□□ 0.12
CLN8-204ENST00000519254 KMT5AQ9NQR1 393 aa15.83■□□□□ 0.12
CLN8-204ENST00000519254 AGPAT3Q9NRZ7 376 aa15.83■□□□□ 0.12
CLN8-204ENST00000519254 CENPFP49454 3210 aa15.83■□□□□ 0.12
CLN8-204ENST00000519254 KPNA6O60684 536 aa15.82■□□□□ 0.12
CLN8-204ENST00000519254 CCDC175P0C221 793 aa15.82■□□□□ 0.12
CLN8-204ENST00000519254 HSPA1AP0DMV8 641 aaKnown RBP15.82■□□□□ 0.12
CLN8-204ENST00000519254 HSPA1BP0DMV9 641 aaKnown RBP15.82■□□□□ 0.12
CLN8-204ENST00000519254 SMTNP53814 917 aa15.82■□□□□ 0.12
CLN8-204ENST00000519254 ALCAMQ13740 583 aa15.82■□□□□ 0.12
CLN8-204ENST00000519254 KCNA10Q16322 511 aa15.82■□□□□ 0.12
CLN8-204ENST00000519254 EXOC8Q8IYI6 725 aa15.82■□□□□ 0.12
CLN8-204ENST00000519254 LMBR1Q8WVP7 490 aa15.82■□□□□ 0.12
CLN8-204ENST00000519254 ZNF592Q92610 1267 aa15.82■□□□□ 0.12
CLN8-204ENST00000519254 JPH2Q9BR39 696 aaPredicted RBP15.82■□□□□ 0.12
CLN8-204ENST00000519254 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.82■□□□□ 0.12
CLN8-204ENST00000519254 UNC93B1Q9H1C4 597 aa15.82■□□□□ 0.12
CLN8-204ENST00000519254 METTL14Q9HCE5 456 aaKnown RBP15.82■□□□□ 0.12
CLN8-204ENST00000519254 LRRIQ4A6NIV6 560 aa15.82■□□□□ 0.12
CLN8-204ENST00000519254 HAS3O00219 553 aa15.82■□□□□ 0.12
CLN8-204ENST00000519254 MSCO60682 206 aa15.82■□□□□ 0.12
CLN8-204ENST00000519254 NOL4O94818 638 aa15.82■□□□□ 0.12
CLN8-204ENST00000519254 ASGR1P07306 291 aa15.82■□□□□ 0.12
CLN8-204ENST00000519254 GJB1P08034 283 aa15.82■□□□□ 0.12
CLN8-204ENST00000519254 EPB41P11171 864 aaKnown RBP15.82■□□□□ 0.12
CLN8-204ENST00000519254 GLRA2P23416 452 aa15.82■□□□□ 0.12
CLN8-204ENST00000519254 ARL2P36404 184 aa15.82■□□□□ 0.12
CLN8-204ENST00000519254 NCKAP1LP55160 1127 aa15.82■□□□□ 0.12
CLN8-204ENST00000519254 GTF2BQ00403 316 aa15.82■□□□□ 0.12
CLN8-204ENST00000519254 MKRN4PQ13434 485 aaPredicted RBP15.82■□□□□ 0.12
CLN8-204ENST00000519254 TSR1Q2NL82 804 aaKnown RBP15.82■□□□□ 0.12
CLN8-204ENST00000519254 MTHFD1LQ6UB35 978 aa15.82■□□□□ 0.12
CLN8-204ENST00000519254 HS2ST1Q7LGA3 356 aa15.82■□□□□ 0.12
CLN8-204ENST00000519254 HAUS6Q7Z4H7 955 aa15.82■□□□□ 0.12
CLN8-204ENST00000519254 RNF180Q86T96 592 aa15.82■□□□□ 0.12
CLN8-204ENST00000519254 TCP11Q8WWU5 503 aa15.82■□□□□ 0.12
CLN8-204ENST00000519254 PRPF31Q8WWY3 499 aaKnown RBP15.82■□□□□ 0.12
CLN8-204ENST00000519254 PSPC1Q8WXF1 523 aaKnown RBP15.82■□□□□ 0.12
CLN8-204ENST00000519254 C17orf75Q9HAS0 396 aa15.82■□□□□ 0.12
CLN8-204ENST00000519254 SUCLA2Q9P2R7 463 aaPredicted RBP15.82■□□□□ 0.12
CLN8-204ENST00000519254 PAXBP1Q9Y5B6 917 aa15.82■□□□□ 0.12
CLN8-204ENST00000519254 IGKV6-21A0A0C4DH24 114 aa15.81■□□□□ 0.12
CLN8-204ENST00000519254 GOLGA6L9A6NEM1 432 aa15.81■□□□□ 0.12
CLN8-204ENST00000519254 MAGEB2O15479 319 aa15.81■□□□□ 0.12
CLN8-204ENST00000519254 GAS2O43903 313 aaKnown RBP15.81■□□□□ 0.12
CLN8-204ENST00000519254 TUBB4AP04350 444 aa15.81■□□□□ 0.12
CLN8-204ENST00000519254 HNRNPH3P31942 346 aaKnown RBP15.81■□□□□ 0.12
CLN8-204ENST00000519254 RTP1P59025 263 aa15.81■□□□□ 0.12
CLN8-204ENST00000519254 ETF1P62495 437 aaKnown RBP15.81■□□□□ 0.12
CLN8-204ENST00000519254 PPP2R3AQ06190 1150 aa15.81■□□□□ 0.12
CLN8-204ENST00000519254 MARCH8Q5T0T0 291 aa15.81■□□□□ 0.12
CLN8-204ENST00000519254 IER5Q5VY09 327 aa15.81■□□□□ 0.12
CLN8-204ENST00000519254 RHPN2Q8IUC4 686 aa15.81■□□□□ 0.12
CLN8-204ENST00000519254 SLC9A9Q8IVB4 645 aa15.81■□□□□ 0.12
CLN8-204ENST00000519254 SYCP3Q8IZU3 236 aa15.81■□□□□ 0.12
CLN8-204ENST00000519254 C7orf31Q8N865 590 aa15.81■□□□□ 0.12
CLN8-204ENST00000519254 KLHDC9Q8NEP7 349 aa15.81■□□□□ 0.12
CLN8-204ENST00000519254 ZNF397Q8NF99 534 aaPredicted RBP15.81■□□□□ 0.12
CLN8-204ENST00000519254 MYRIPQ8NFW9 859 aa15.81■□□□□ 0.12
CLN8-204ENST00000519254 NEK11Q8NG66 645 aa15.81■□□□□ 0.12
CLN8-204ENST00000519254 GOLGA5Q8TBA6 731 aa15.81■□□□□ 0.12
CLN8-204ENST00000519254 BAP1Q92560 729 aa15.81■□□□□ 0.12
CLN8-204ENST00000519254 SLC35C1Q96A29 364 aa15.81■□□□□ 0.12
CLN8-204ENST00000519254 ZNF668Q96K58 619 aaPredicted RBP15.81■□□□□ 0.12
CLN8-204ENST00000519254 ACCSQ96QU6 501 aa15.81■□□□□ 0.12
CLN8-204ENST00000519254 PPP1R16BQ96T49 567 aa15.81■□□□□ 0.12
CLN8-204ENST00000519254 CRACR2AQ9BSW2 395 aa15.81■□□□□ 0.12
CLN8-204ENST00000519254 EDEM3Q9BZQ6 932 aa15.81■□□□□ 0.12
CLN8-204ENST00000519254 ADGRA3Q8IWK6 1321 aa15.81■□□□□ 0.12
CLN8-204ENST00000519254 A0A0U1RQJ8 604 aa15.8■□□□□ 0.12
CLN8-204ENST00000519254 RRN3P2A6NIE6 340 aa15.8■□□□□ 0.12
CLN8-204ENST00000519254 CST5P28325 142 aaPredicted RBP15.8■□□□□ 0.12
CLN8-204ENST00000519254 PSMC2P35998 433 aaKnown RBP15.8■□□□□ 0.12
CLN8-204ENST00000519254 NKX3-2P78367 333 aa15.8■□□□□ 0.12
CLN8-204ENST00000519254 CAPSQ13938 189 aa15.8■□□□□ 0.12
CLN8-204ENST00000519254 PPP2R5AQ15172 486 aa15.8■□□□□ 0.12
CLN8-204ENST00000519254 MTFR1Q15390 333 aa15.8■□□□□ 0.12
CLN8-204ENST00000519254 LHX8Q68G74 356 aa15.8■□□□□ 0.12
CLN8-204ENST00000519254 DPY19L2P1Q6NXN4 242 aa15.8■□□□□ 0.12
CLN8-204ENST00000519254 NFRKBQ6P4R8 1299 aa15.8■□□□□ 0.12
CLN8-204ENST00000519254 SYT10Q6XYQ8 523 aa15.8■□□□□ 0.12
CLN8-204ENST00000519254 CTU1Q7Z7A3 348 aaKnown RBP15.8■□□□□ 0.12
CLN8-204ENST00000519254 FAM186BQ8IYM0 893 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms