RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 CCDC60Q8IWA6 550 aaPredicted RBP3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 FAM178BQ8IXR5 827 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 C4orf19Q8IY42 314 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 FAM71AQ8IYT1 594 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 C12orf50Q8NA57 414 aaPredicted RBP3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 WHAMMQ8TF30 809 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 PSPC1Q8WXF1 523 aaKnown RBP3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 LPAR1Q92633 364 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 TLCD1Q96CP7 247 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 HVCN1Q96D96 273 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 ATG4CQ96DT6 458 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 RNPC3Q96LT9 517 aaKnown RBP3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 PCDHB18PQ96TA0 734 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 KRT12Q99456 494 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 SENP7Q9BQF6 1050 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 ZSWIM1Q9BR11 485 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 PDCD2LQ9BRP1 358 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 TRIM51Q9BSJ1 452 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 ZNF577Q9BSK1 485 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 KIFC3Q9BVG8 833 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 STK33Q9BYT3 514 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 TMEM117Q9H0C3 514 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 DDX47Q9H0S4 455 aaKnown RBP3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 THAP2Q9H0W7 228 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 CARD9Q9H257 536 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 VPS33BQ9H267 617 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 ADAM7Q9H2U9 754 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 TAF1DQ9H5J8 278 aaPredicted RBP3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 SLITRK6Q9H5Y7 841 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 PXMP2Q9NR77 195 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 TOPORSQ9NS56 1045 aaPredicted RBP3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 EURLQ9NYK6 297 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 HSPBP1Q9NZL4 362 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 CALCOCO1Q9P1Z2 691 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 ZNF219Q9P2Y4 722 aaPredicted RBP3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 FEZ2Q9UHY8 353 aaPredicted RBP3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 DNAJC12Q9UKB3 198 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 CCPG1Q9ULG6 757 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 NFU1Q9UMS0 254 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 ADAMTS5Q9UNA0 930 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 BCS1LQ9Y276 419 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 MRPL11Q9Y3B7 192 aaKnown RBP3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 RRP15Q9Y3B9 282 aaKnown RBP3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 PCDHB13Q9Y5F0 798 aa3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 BZW2Q9Y6E2 419 aaKnown RBP3.53□□□□□ -1.84
SCARNA20.6-201ENST00000517251 CEP350Q5VT06 3117 aa3.53□□□□□ -1.85
SCARNA20.6-201ENST00000517251 MROH7Q68CQ1 1323 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 ADGRA2Q96PE1 1338 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 SYNGAP1Q96PV0 1343 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 TCRBV5S1A1TA0A578 114 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 TCRBV7S2A1N4TA0A589 114 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 ARHGEF35A5YM69 484 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 ANKRD62A6NC57 917 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 GOLGA6CA6NDK9 693 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 C5orf60A6NFR6 353 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 SRRM3A6NNA2 597 aaPredicted RBP3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 SPDYE16A6NNV3 312 aaPredicted RBP3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 DCDC2CA8MYV0 355 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 GOLGA8KD6RF30 607 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 CCDC188H7C350 402 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 DDX39AO00148 427 aaKnown RBP3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 FOXN3O00409 490 aaPredicted RBP3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 KCNK3O14649 394 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 ATP2A1O14983 1001 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 TTI1O43156 1089 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 ATMINO43313 823 aaPredicted RBP3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 PHF2O75151 1096 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 PHACTR2O75167 634 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 PPFIA2O75334 1257 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 PPFIA4O75335 1185 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 VNN1O95497 513 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 KRT18P05783 430 aaKnown RBP3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 P4HBP07237 508 aaKnown RBP3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 NUDT17P0C025 328 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 H2AFZP0C0S5 128 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 GOLGA6DP0CG33 693 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 EIF2AK2P19525 551 aaKnown RBP3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 LMNB1P20700 586 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 EDNRBP24530 442 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 CTNNA2P26232 953 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 RPL13P26373 211 aaKnown RBP3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 HMGB2P26583 209 aaKnown RBP3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 CTNNA1P35221 906 aaKnown RBP3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 STAT1P42224 750 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 QARSP47897 775 aaKnown RBP3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 PEX5P50542 639 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 DNA2P51530 1060 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 GPC3P51654 580 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 VAMP7P51809 220 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 ZNF132P52740 706 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 RBM5P52756 815 aaKnown RBP eCLIP3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 CORO7P57737 925 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 TNNC1P63316 161 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 CLDN10P78369 228 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 PRKCEQ02156 737 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 GUCY2DQ02846 1103 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 ARID5AQ03989 594 aa3.52□□□□□ -1.85
SCARNA20.6-201ENST00000517251 EN1Q05925 392 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms