RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 H3BNC9 293 aa12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 ACKR2O00590 384 aa12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 B4GALT5O43286 388 aa12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 PLS3P13797 630 aa12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 IGFBP4P22692 258 aa12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 TXLNAP40222 546 aa12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 RAD51AP2Q09MP3 1159 aa12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 GIT2Q14161 759 aa12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 DHX8Q14562 1220 aaKnown RBP12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 MAPK6Q16659 721 aa12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 NAALADL2Q58DX5 795 aa12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 AXDND1Q5T1B0 1012 aaPredicted RBP12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 LRRC55Q6ZSA7 311 aa12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 RNF169Q8NCN4 708 aa12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 CNNM3Q8NE01 707 aa12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 FBXO22Q8NEZ5 403 aa12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 RASSF8Q8NHQ8 419 aa12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 KCNG4Q8TDN1 519 aa12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 SPIRE2Q8WWL2 714 aa12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 LARP4BQ92615 738 aaKnown RBP12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 PGBD4Q96DM1 585 aa12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 CCDC51Q96ER9 411 aa12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 CPB2Q96IY4 423 aa12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 PLVAPQ9BX97 442 aa12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 CCDC113Q9H0I3 377 aa12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 TMEM134Q9H6X4 195 aa12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 STK17AQ9UEE5 414 aa12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 ODF2LQ9ULJ1 636 aa12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 PCDHA7Q9UN72 937 aa12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 MRPL42Q9Y6G3 142 aaKnown RBP12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 ARID2Q68CP9 1835 aa12.31□□□□□ -0.44
SCARNA20-201ENST00000516768 NPHP3-ACAD11A0A0J9YXS1 232 aa12.3□□□□□ -0.44
SCARNA20-201ENST00000516768 TTLL13PA6NNM8 815 aa12.3□□□□□ -0.44
SCARNA20-201ENST00000516768 OFD1O75665 1012 aa12.3□□□□□ -0.44
SCARNA20-201ENST00000516768 NCLP19338 710 aaKnown RBP12.3□□□□□ -0.44
SCARNA20-201ENST00000516768 DMP1Q13316 513 aaPredicted RBP12.3□□□□□ -0.44
SCARNA20-201ENST00000516768 PAN2Q504Q3 1202 aaKnown RBP12.3□□□□□ -0.44
SCARNA20-201ENST00000516768 CLLU1OSQ5K130 101 aa12.3□□□□□ -0.44
SCARNA20-201ENST00000516768 SLC27A1Q6PCB7 646 aa12.3□□□□□ -0.44
SCARNA20-201ENST00000516768 SHC4Q6S5L8 630 aa12.3□□□□□ -0.44
SCARNA20-201ENST00000516768 AGMOQ6ZNB7 445 aa12.3□□□□□ -0.44
SCARNA20-201ENST00000516768 CCDC73Q6ZRK6 1079 aa12.3□□□□□ -0.44
SCARNA20-201ENST00000516768 GPBP1Q86WP2 473 aa12.3□□□□□ -0.44
SCARNA20-201ENST00000516768 ABI1Q8IZP0 508 aa12.3□□□□□ -0.44
SCARNA20-201ENST00000516768 SMG8Q8ND04 991 aaKnown RBP12.3□□□□□ -0.44
SCARNA20-201ENST00000516768 RSPH1Q8WYR4 309 aa12.3□□□□□ -0.44
SCARNA20-201ENST00000516768 P2RX5Q93086 422 aa12.3□□□□□ -0.44
SCARNA20-201ENST00000516768 EIF2AQ9BY44 585 aaKnown RBP12.3□□□□□ -0.44
SCARNA20-201ENST00000516768 CWH43Q9H720 699 aa12.3□□□□□ -0.44
SCARNA20-201ENST00000516768 KMT5AQ9NQR1 393 aa12.3□□□□□ -0.44
SCARNA20-201ENST00000516768 LARSQ9P2J5 1176 aaKnown RBP12.3□□□□□ -0.44
SCARNA20-201ENST00000516768 ARHGAP28Q9P2N2 729 aa12.3□□□□□ -0.44
SCARNA20-201ENST00000516768 ATP6V1DQ9Y5K8 247 aa12.3□□□□□ -0.44
SCARNA20-201ENST00000516768 MTCH2Q9Y6C9 303 aa12.3□□□□□ -0.44
SCARNA20-201ENST00000516768 A0A087X0B3 334 aa12.29□□□□□ -0.44
SCARNA20-201ENST00000516768 MEIS3P2A8K0S8 358 aa12.29□□□□□ -0.44
SCARNA20-201ENST00000516768 SLC16A4O15374 487 aa12.29□□□□□ -0.44
SCARNA20-201ENST00000516768 PRKCBP05771 671 aa12.29□□□□□ -0.44
SCARNA20-201ENST00000516768 ME1P48163 572 aa12.29□□□□□ -0.44
SCARNA20-201ENST00000516768 ZNF131P52739 623 aa12.29□□□□□ -0.44
SCARNA20-201ENST00000516768 SMTNP53814 917 aa12.29□□□□□ -0.44
SCARNA20-201ENST00000516768 GPM6BQ13491 265 aa12.29□□□□□ -0.44
SCARNA20-201ENST00000516768 PRPF4BQ13523 1007 aaKnown RBP12.29□□□□□ -0.44
SCARNA20-201ENST00000516768 LONRF3Q496Y0 759 aa12.29□□□□□ -0.44
SCARNA20-201ENST00000516768 NT5DC1Q5TFE4 455 aa12.29□□□□□ -0.44
SCARNA20-201ENST00000516768 SV2BQ7L1I2 683 aa12.29□□□□□ -0.44
SCARNA20-201ENST00000516768 MAFAQ8NHW3 353 aaPredicted RBP12.29□□□□□ -0.44
SCARNA20-201ENST00000516768 HELQQ8TDG4 1101 aa12.29□□□□□ -0.44
SCARNA20-201ENST00000516768 KCNN1Q92952 543 aa12.29□□□□□ -0.44
SCARNA20-201ENST00000516768 LPPQ93052 612 aa12.29□□□□□ -0.44
SCARNA20-201ENST00000516768 REEP2Q9BRK0 252 aa12.29□□□□□ -0.44
SCARNA20-201ENST00000516768 KIFC3Q9BVG8 833 aa12.29□□□□□ -0.44
SCARNA20-201ENST00000516768 RNF39Q9H2S5 420 aa12.29□□□□□ -0.44
SCARNA20-201ENST00000516768 UBN1Q9NPG3 1134 aa12.29□□□□□ -0.44
SCARNA20-201ENST00000516768 PLAGL2Q9UPG8 496 aa12.29□□□□□ -0.44
SCARNA20-201ENST00000516768 USP20Q9Y2K6 914 aa12.29□□□□□ -0.44
SCARNA20-201ENST00000516768 IPPQ9Y573 584 aa12.29□□□□□ -0.44
SCARNA20-201ENST00000516768 COL4A6Q14031 1691 aa12.29□□□□□ -0.44
SCARNA20-201ENST00000516768 COL6A3P12111 3177 aa12.28□□□□□ -0.44
SCARNA20-201ENST00000516768 GTPBP6O43824 516 aaPredicted RBP12.28□□□□□ -0.44
SCARNA20-201ENST00000516768 ITGA4P13612 1032 aa12.28□□□□□ -0.44
SCARNA20-201ENST00000516768 CTNNB1P35222 781 aa12.28□□□□□ -0.44
SCARNA20-201ENST00000516768 KRT85P78386 507 aa12.28□□□□□ -0.44
SCARNA20-201ENST00000516768 NUCB2P80303 420 aa12.28□□□□□ -0.44
SCARNA20-201ENST00000516768 CACNB1Q02641 598 aaPredicted RBP12.28□□□□□ -0.44
SCARNA20-201ENST00000516768 NOMO2Q5JPE7 1267 aa12.28□□□□□ -0.44
SCARNA20-201ENST00000516768 GLB1LQ6UWU2 654 aa12.28□□□□□ -0.44
SCARNA20-201ENST00000516768 TAS1R3Q7RTX0 852 aa12.28□□□□□ -0.44
SCARNA20-201ENST00000516768 CDR2LQ86X02 465 aaPredicted RBP12.28□□□□□ -0.44
SCARNA20-201ENST00000516768 MYCT1Q8N699 235 aa12.28□□□□□ -0.44
SCARNA20-201ENST00000516768 PDILTQ8N807 584 aa12.28□□□□□ -0.44
SCARNA20-201ENST00000516768 KLHL23Q8NBE8 558 aa12.28□□□□□ -0.44
SCARNA20-201ENST00000516768 TMEM161BQ8NDZ6 487 aa12.28□□□□□ -0.44
SCARNA20-201ENST00000516768 GDPD5Q8WTR4 605 aa12.28□□□□□ -0.44
SCARNA20-201ENST00000516768 DDX12PQ92771 950 aa12.28□□□□□ -0.44
SCARNA20-201ENST00000516768 C11orf84Q9BUA3 381 aaPredicted RBP12.28□□□□□ -0.44
SCARNA20-201ENST00000516768 AAASQ9NRG9 546 aa12.28□□□□□ -0.44
SCARNA20-201ENST00000516768 KANSL3Q9P2N6 904 aa12.28□□□□□ -0.44
SCARNA20-201ENST00000516768 HES2Q9Y543 173 aa12.28□□□□□ -0.44
SCARNA20-201ENST00000516768 PCDHB12Q9Y5F1 795 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms