RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 SMAD4Q13485 552 aaKnown RBP6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 ZNF174Q15697 407 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 MAPK6Q16659 721 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 AMHR2Q16671 573 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 DCAF4L1Q3SXM0 396 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 NOMO2Q5JPE7 1267 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 FAM102BQ5T8I3 360 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 MCTP1Q6DN14 999 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 SLC27A1Q6PCB7 646 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 MRPL10Q7Z7H8 261 aaKnown RBP6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 SLC39A11Q8N1S5 342 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 EFHBQ8N7U6 833 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 C4orf32Q8N8J7 132 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 SMRP1Q8NCR6 262 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 SPPL3Q8TCT6 385 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 HELQQ8TDG4 1101 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 PIGOQ8TEQ8 1089 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 TMEM143Q96AN5 459 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 IFT74Q96LB3 600 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 CSRNP2Q9H175 543 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 PRDM6Q9NQX0 595 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 TYW1Q9NV66 732 aaKnown RBP6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 SPG21Q9NZD8 308 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 ODF2LQ9ULJ1 636 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 GIT1Q9Y2X7 761 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 PCDHB6Q9Y5E3 794 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 PCDHB2Q9Y5E7 798 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 TDRD15B5MCY1 1934 aaKnown RBP6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 A0A1B0GUA9 196 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 ACKR2O00590 384 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 ZC3H11AO75152 810 aaKnown RBP eCLIP6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 TBX10O75333 385 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 NR1I2O75469 434 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 EYA4O95677 639 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 C1RP00736 705 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 HOXB8P17481 243 aaPredicted RBP6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 ARF4P18085 180 aaPredicted RBP6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 FGFR4P22455 802 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 KCNA5P22460 613 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 HOXA11P31270 313 aaPredicted RBP6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 LONP1P36776 959 aaKnown RBP6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 NDUFV1P49821 464 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 TOB1P50616 345 aaPredicted RBP6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 CREMQ03060 361 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 RNASELQ05823 741 aaKnown RBP6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 HYAL1Q12794 435 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 COASYQ13057 564 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 CAMK1Q14012 370 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 SMC1AQ14683 1233 aaKnown RBP6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 DUSP6Q16828 381 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 UBXN11Q5T124 520 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 LARP1BQ659C4 914 aaKnown RBP6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 ELMSAN1Q6PJG2 1045 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 PADI6Q6TGC4 694 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 TMEM184AQ6ZMB5 413 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 AGMOQ6ZNB7 445 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 KSR1Q8IVT5 923 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 ZNF579Q8NAF0 562 aaKnown RBP6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 DEPTORQ8TB45 409 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 ASAP3Q8TDY4 903 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 SNX21Q969T3 373 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 CDK5RAP3Q96JB5 506 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 RPS6KC1Q96S38 1066 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 TCF25Q9BQ70 676 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 CCDC113Q9H0I3 377 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 ZBP1Q9H171 429 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 BHMT2Q9H2M3 363 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 FZD8Q9H461 694 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 ZSCAN16Q9H4T2 348 aaPredicted RBP6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 MINDY3Q9H8M7 445 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 ALG13Q9NP73 1137 aaKnown RBP6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 ENTPD7Q9NQZ7 604 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 BMP2KQ9NSY1 1161 aaPredicted RBP6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 DDX19AQ9NUU7 478 aaKnown RBP6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 TBC1D13Q9NVG8 400 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 DZANK1Q9NVP4 752 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 CLDND1Q9NY35 253 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 DNM3Q9UQ16 869 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 SSX2IPQ9Y2D8 614 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 RBM19Q9Y4C8 960 aaKnown RBP6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 IPPQ9Y573 584 aa6.63□□□□□ -1.35
SCARNA18.1-201ENST00000516330 TTC28Q96AY4 2481 aa6.62□□□□□ -1.35
SCARNA18.1-201ENST00000516330 BRWD1Q9NSI6 2320 aa6.62□□□□□ -1.35
SCARNA18.1-201ENST00000516330 DENND4AQ7Z401 1863 aa6.62□□□□□ -1.35
SCARNA18.1-201ENST00000516330 A0A0C4DFX4 3053 aa6.62□□□□□ -1.35
SCARNA18.1-201ENST00000516330 GRXCR2A6NFK2 248 aa6.62□□□□□ -1.35
SCARNA18.1-201ENST00000516330 DTNBO60941 627 aa6.62□□□□□ -1.35
SCARNA18.1-201ENST00000516330 OFD1O75665 1012 aa6.62□□□□□ -1.35
SCARNA18.1-201ENST00000516330 PRKCBP05771 671 aa6.62□□□□□ -1.35
SCARNA18.1-201ENST00000516330 SRGAP2CP0DJJ0 459 aa6.62□□□□□ -1.35
SCARNA18.1-201ENST00000516330 CTSAP10619 480 aa6.62□□□□□ -1.35
SCARNA18.1-201ENST00000516330 ITGA4P13612 1032 aa6.62□□□□□ -1.35
SCARNA18.1-201ENST00000516330 TXLNAP40222 546 aa6.62□□□□□ -1.35
SCARNA18.1-201ENST00000516330 MLH1P40692 756 aa6.62□□□□□ -1.35
SCARNA18.1-201ENST00000516330 GATMP50440 423 aa6.62□□□□□ -1.35
SCARNA18.1-201ENST00000516330 KCNQ1P51787 676 aa6.62□□□□□ -1.35
SCARNA18.1-201ENST00000516330 BCAR1P56945 870 aa6.62□□□□□ -1.35
SCARNA18.1-201ENST00000516330 TFF2Q03403 129 aa6.62□□□□□ -1.35
SCARNA18.1-201ENST00000516330 DSC1Q08554 894 aa6.62□□□□□ -1.35
SCARNA18.1-201ENST00000516330 PRPF4BQ13523 1007 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms