RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 POU5F1BQ06416 359 aa12.72□□□□□ -0.37
SUB1-213ENST00000515355 PRPF4BQ13523 1007 aaKnown RBP12.72□□□□□ -0.37
SUB1-213ENST00000515355 MAPK6Q16659 721 aa12.72□□□□□ -0.37
SUB1-213ENST00000515355 C1orf186Q6ZWK4 172 aa12.72□□□□□ -0.37
SUB1-213ENST00000515355 RAD54LQ92698 747 aa12.72□□□□□ -0.37
SUB1-213ENST00000515355 PGBD4Q96DM1 585 aa12.72□□□□□ -0.37
SUB1-213ENST00000515355 SAMD11Q96NU1 681 aa12.72□□□□□ -0.37
SUB1-213ENST00000515355 CASD1Q96PB1 797 aa12.72□□□□□ -0.37
SUB1-213ENST00000515355 EIF2AQ9BY44 585 aaKnown RBP12.72□□□□□ -0.37
SUB1-213ENST00000515355 CCSER1Q9C0I3 900 aa12.72□□□□□ -0.37
SUB1-213ENST00000515355 TMEM117Q9H0C3 514 aa12.72□□□□□ -0.37
SUB1-213ENST00000515355 GBP3Q9H0R5 595 aa12.72□□□□□ -0.37
SUB1-213ENST00000515355 ALG13Q9NP73 1137 aaKnown RBP12.72□□□□□ -0.37
SUB1-213ENST00000515355 KMT5AQ9NQR1 393 aa12.72□□□□□ -0.37
SUB1-213ENST00000515355 TYW1Q9NV66 732 aaKnown RBP12.72□□□□□ -0.37
SUB1-213ENST00000515355 PRMT7Q9NVM4 692 aaPredicted RBP12.72□□□□□ -0.37
SUB1-213ENST00000515355 PTPRSQ13332 1948 aa12.72□□□□□ -0.37
SUB1-213ENST00000515355 MEIS3P2A8K0S8 358 aa12.71□□□□□ -0.37
SUB1-213ENST00000515355 K7ERI5 159 aa12.71□□□□□ -0.37
SUB1-213ENST00000515355 SLC16A4O15374 487 aa12.71□□□□□ -0.37
SUB1-213ENST00000515355 GALR2O43603 387 aaPredicted RBP12.71□□□□□ -0.37
SUB1-213ENST00000515355 FAM13AO94988 1023 aa12.71□□□□□ -0.37
SUB1-213ENST00000515355 EOMESO95936 686 aa12.71□□□□□ -0.37
SUB1-213ENST00000515355 ITGA4P13612 1032 aa12.71□□□□□ -0.37
SUB1-213ENST00000515355 AXLP30530 894 aa12.71□□□□□ -0.37
SUB1-213ENST00000515355 DDIT3P35638 169 aa12.71□□□□□ -0.37
SUB1-213ENST00000515355 STAT6P42226 847 aa12.71□□□□□ -0.37
SUB1-213ENST00000515355 NPTX2P47972 431 aa12.71□□□□□ -0.37
SUB1-213ENST00000515355 RAB27AP51159 221 aa12.71□□□□□ -0.37
SUB1-213ENST00000515355 CLLU1OSQ5K130 101 aa12.71□□□□□ -0.37
SUB1-213ENST00000515355 GLB1LQ6UWU2 654 aa12.71□□□□□ -0.37
SUB1-213ENST00000515355 FAM43BQ6ZT52 329 aaPredicted RBP12.71□□□□□ -0.37
SUB1-213ENST00000515355 CRIPAKQ8N1N5 446 aa12.71□□□□□ -0.37
SUB1-213ENST00000515355 LRRC15Q8TF66 581 aa12.71□□□□□ -0.37
SUB1-213ENST00000515355 LARP4BQ92615 738 aaKnown RBP12.71□□□□□ -0.37
SUB1-213ENST00000515355 CHAMP1Q96JM3 812 aa12.71□□□□□ -0.37
SUB1-213ENST00000515355 RC3H2Q9HBD1 1191 aaKnown RBP12.71□□□□□ -0.37
SUB1-213ENST00000515355 AAASQ9NRG9 546 aa12.71□□□□□ -0.37
SUB1-213ENST00000515355 PARP2Q9UGN5 583 aa12.71□□□□□ -0.37
SUB1-213ENST00000515355 CFAP45Q9UL16 551 aa12.71□□□□□ -0.37
SUB1-213ENST00000515355 RWDD3Q9Y3V2 267 aa12.71□□□□□ -0.37
SUB1-213ENST00000515355 HES2Q9Y543 173 aa12.71□□□□□ -0.37
SUB1-213ENST00000515355 PCDHB12Q9Y5F1 795 aa12.71□□□□□ -0.37
SUB1-213ENST00000515355 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.7□□□□□ -0.38
SUB1-213ENST00000515355 SLC26A4O43511 780 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 TBCAO75347 108 aaKnown RBP12.7□□□□□ -0.38
SUB1-213ENST00000515355 YEATS4O95619 227 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 ATF7P17544 494 aaPredicted RBP12.7□□□□□ -0.38
SUB1-213ENST00000515355 AKAP5P24588 427 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 GUCY2CP25092 1073 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 PBX3P40426 434 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 EFNA5P52803 228 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 SMTNP53814 917 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 PCBP1Q15365 356 aaKnown RBP eCLIP12.7□□□□□ -0.38
SUB1-213ENST00000515355 AMHR2Q16671 573 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 PTPROQ16827 1216 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 ARSHQ5FYA8 562 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 UBXN11Q5T124 520 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 CDCA2Q69YH5 1023 aaPredicted RBP12.7□□□□□ -0.38
SUB1-213ENST00000515355 CCDC73Q6ZRK6 1079 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 EP400NLQ6ZTU2 488 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 SV2BQ7L1I2 683 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 DYMQ7RTS9 669 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 ZNF598Q86UK7 904 aaKnown RBP12.7□□□□□ -0.38
SUB1-213ENST00000515355 IFNLR1Q8IU57 520 aaPredicted RBP12.7□□□□□ -0.38
SUB1-213ENST00000515355 THNSL1Q8IYQ7 743 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 KCTD17Q8N5Z5 321 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 MYCT1Q8N699 235 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 KLHL23Q8NBE8 558 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 URGCPQ8TCY9 931 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 MICAL1Q8TDZ2 1067 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 REEP2Q9BRK0 252 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 C11orf84Q9BUA3 381 aaPredicted RBP12.7□□□□□ -0.38
SUB1-213ENST00000515355 TIPINQ9BVW5 301 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 NFKBIZQ9BYH8 718 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 BLOC1S4Q9NUP1 217 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 RNF19AQ9NV58 838 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 IPPQ9Y573 584 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 MTCH2Q9Y6C9 303 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 TTC3P53804 2025 aa12.7□□□□□ -0.38
SUB1-213ENST00000515355 COL6A3P12111 3177 aa12.69□□□□□ -0.38
SUB1-213ENST00000515355 CDH23Q9H251 3354 aa12.69□□□□□ -0.38
SUB1-213ENST00000515355 TTLL13PA6NNM8 815 aa12.69□□□□□ -0.38
SUB1-213ENST00000515355 H3BNC9 293 aa12.69□□□□□ -0.38
SUB1-213ENST00000515355 TULP1O00294 542 aaPredicted RBP12.69□□□□□ -0.38
SUB1-213ENST00000515355 ACKR2O00590 384 aa12.69□□□□□ -0.38
SUB1-213ENST00000515355 N4BP3O15049 544 aa12.69□□□□□ -0.38
SUB1-213ENST00000515355 LPXNO60711 386 aa12.69□□□□□ -0.38
SUB1-213ENST00000515355 CUTAO60888 179 aa12.69□□□□□ -0.38
SUB1-213ENST00000515355 ZC3H11AO75152 810 aaKnown RBP eCLIP12.69□□□□□ -0.383e-9■□□□□ 10.4
SUB1-213ENST00000515355 PPP6R2O75170 966 aa12.69□□□□□ -0.38
SUB1-213ENST00000515355 BRD1O95696 1058 aa12.69□□□□□ -0.38
SUB1-213ENST00000515355 POMCP01189 267 aa12.69□□□□□ -0.38
SUB1-213ENST00000515355 RB1P06400 928 aa12.69□□□□□ -0.38
SUB1-213ENST00000515355 HARSP12081 509 aaKnown RBP12.69□□□□□ -0.38
SUB1-213ENST00000515355 PLS3P13797 630 aa12.69□□□□□ -0.38
SUB1-213ENST00000515355 CA8P35219 290 aa12.69□□□□□ -0.38
SUB1-213ENST00000515355 MATR3P43243 847 aaKnown RBP eCLIP12.69□□□□□ -0.38
SUB1-213ENST00000515355 STRN3Q13033 797 aa12.69□□□□□ -0.38
SUB1-213ENST00000515355 NOMO2Q5JPE7 1267 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms