RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 KMT5AQ9NQR1 393 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 SLC9A2Q9UBY0 812 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 PFASO15067 1338 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 CES2O00748 559 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 SORBS3O60504 671 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 CNGA1P29973 690 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 RNASE9P60153 205 aaKnown RBP8.88□□□□□ -0.99
CPNE4-211ENST00000514439 ACTR2P61160 394 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 SNRNP35Q16560 246 aaKnown RBP8.88□□□□□ -0.99
CPNE4-211ENST00000514439 GLE1Q53GS7 698 aaKnown RBP8.88□□□□□ -0.99
CPNE4-211ENST00000514439 HSP90B2PQ58FF3 399 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 SLFN11Q7Z7L1 901 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 PALB2Q86YC2 1186 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 USP38Q8NB14 1042 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.88□□□□□ -0.99
CPNE4-211ENST00000514439 RFFLQ8WZ73 363 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 OSGEPQ9NPF4 335 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 XPNPEP1Q9NQW7 623 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 SEPT11Q9NVA2 429 aaKnown RBP8.88□□□□□ -0.99
CPNE4-211ENST00000514439 HOXC10Q9NYD6 342 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 SEPT9Q9UHD8 586 aaPredicted RBP8.88□□□□□ -0.99
CPNE4-211ENST00000514439 PRDM4Q9UKN5 801 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 MYPNQ86TC9 1320 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 ADGRA3Q8IWK6 1321 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 ZC3H4Q9UPT8 1303 aaKnown RBP8.88□□□□□ -0.99
CPNE4-211ENST00000514439 IGSF9BQ9UPX0 1349 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 SPATA31C2B4DYI2 1134 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 PMM2O15305 246 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 DKC1O60832 514 aaKnown RBP eCLIP8.88□□□□□ -0.99
CPNE4-211ENST00000514439 STAM2O75886 525 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 DGAT1O75907 488 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 TMEM253P0C7T8 217 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 ZBTB48P10074 688 aaPredicted RBP8.88□□□□□ -0.99
CPNE4-211ENST00000514439 ABCB4P21439 1286 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 TNFAIP3P21580 790 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 TNFRSF8P28908 595 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 AARSP49588 968 aaKnown RBP eCLIP8.88□□□□□ -0.99
CPNE4-211ENST00000514439 GNPTABQ3T906 1256 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 SUPT20HL1Q3ZLR7 823 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 SH3D19Q5HYK7 790 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 SLC39A4Q6P5W5 647 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 ABHD15Q6UXT9 468 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 PEX26Q7Z412 305 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 DAAM2Q86T65 1068 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 SYCE1Q8N0S2 351 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 GPC2Q8N158 579 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 FAM71BQ8TC56 605 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 SLC20A1Q8WUM9 679 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 LMBR1Q8WVP7 490 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 CTNNBL1Q8WYA6 563 aaPredicted RBP8.88□□□□□ -0.99
CPNE4-211ENST00000514439 KAT5Q92993 513 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 PBKQ96KB5 322 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 NTPCRQ9BSD7 190 aaKnown RBP8.88□□□□□ -0.99
CPNE4-211ENST00000514439 C17orf75Q9HAS0 396 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 TAS2R14Q9NYV8 317 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 VPS18Q9P253 973 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 FAN1Q9Y2M0 1017 aa8.88□□□□□ -0.99
CPNE4-211ENST00000514439 FAM170AA1A519 330 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 USP2O75604 605 aaPredicted RBP8.87□□□□□ -0.99
CPNE4-211ENST00000514439 GLI1P08151 1106 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 CYP2C19P33261 490 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 MCCD1P59942 119 aaPredicted RBP8.87□□□□□ -0.99
CPNE4-211ENST00000514439 MAP2K1Q02750 393 aaPredicted RBP8.87□□□□□ -0.99
CPNE4-211ENST00000514439 VGLL4Q14135 290 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 SND1Q7KZF4 910 aaKnown RBP eCLIP8.87□□□□□ -0.99
CPNE4-211ENST00000514439 MCPH1Q8NEM0 835 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 SLC35G2Q8TBE7 412 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 PARD3BQ8TEW8 1205 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 CCDC127Q96BQ5 260 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 ARHGEF26Q96DR7 871 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 KRT12Q99456 494 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 AGPAT1Q99943 283 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 ATP6V0A4Q9HBG4 840 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 MED4Q9NPJ6 270 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.87□□□□□ -0.99
CPNE4-211ENST00000514439 PDLIM7Q9NR12 457 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 CYP26B1Q9NR63 512 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.87□□□□□ -0.99
CPNE4-211ENST00000514439 SUCLA2Q9P2R7 463 aaPredicted RBP8.87□□□□□ -0.99
CPNE4-211ENST00000514439 TMEM59LQ9UK28 342 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 ADAM21Q9UKJ8 722 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 ZHX1Q9UKY1 873 aaPredicted RBP8.87□□□□□ -0.99
CPNE4-211ENST00000514439 STXBP5LQ9Y2K9 1186 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 SNCAIPQ9Y6H5 919 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 ZSCAN5CA6NGD5 496 aaPredicted RBP8.87□□□□□ -0.99
CPNE4-211ENST00000514439 TULP1O00294 542 aaPredicted RBP8.87□□□□□ -0.99
CPNE4-211ENST00000514439 CEP104O60308 925 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 BUB1BO60566 1050 aaPredicted RBP8.87□□□□□ -0.99
CPNE4-211ENST00000514439 PEX10O60683 326 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 PHACTR2O75167 634 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 HEXIM1O94992 359 aaKnown RBP8.87□□□□□ -0.99
CPNE4-211ENST00000514439 SUPT20HL2P0C7V6 817 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 EPHB4P54760 987 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 TNNC1P63316 161 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 SP2Q02086 613 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 TREML2Q5T2D2 321 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 MIS18BP1Q6P0N0 1132 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 DLK2Q6UY11 383 aa8.87□□□□□ -0.99
CPNE4-211ENST00000514439 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.87□□□□□ -0.99
CPNE4-211ENST00000514439 NT5DC3Q86UY8 548 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms