RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 MCM7P33993 719 aa8.12□□□□□ -1.11
HTT-212ENST00000513639 TRAPPC10P48553 1259 aa8.12□□□□□ -1.11
HTT-212ENST00000513639 BCAR1P56945 870 aa8.12□□□□□ -1.11
HTT-212ENST00000513639 PTENP60484 403 aa8.12□□□□□ -1.11
HTT-212ENST00000513639 PDIA5Q14554 519 aa8.12□□□□□ -1.11
HTT-212ENST00000513639 CLUL1Q15846 466 aa8.12□□□□□ -1.11
HTT-212ENST00000513639 NOTUMQ6P988 496 aa8.12□□□□□ -1.11
HTT-212ENST00000513639 DDX53Q86TM3 631 aaKnown RBP8.12□□□□□ -1.11
HTT-212ENST00000513639 SLC39A11Q8N1S5 342 aa8.12□□□□□ -1.11
HTT-212ENST00000513639 SMRP1Q8NCR6 262 aa8.12□□□□□ -1.11
HTT-212ENST00000513639 MCPH1Q8NEM0 835 aa8.12□□□□□ -1.11
HTT-212ENST00000513639 LRFN3Q9BTN0 628 aa8.12□□□□□ -1.11
HTT-212ENST00000513639 POLR3CQ9BUI4 534 aaPredicted RBP8.12□□□□□ -1.11
HTT-212ENST00000513639 NFKBIZQ9BYH8 718 aa8.12□□□□□ -1.11
HTT-212ENST00000513639 UPF2Q9HAU5 1272 aaKnown RBP8.12□□□□□ -1.11
HTT-212ENST00000513639 TUFT1Q9NNX1 390 aa8.12□□□□□ -1.11
HTT-212ENST00000513639 RYDENQ9NUL5 291 aaKnown RBP8.12□□□□□ -1.11
HTT-212ENST00000513639 AGPAT5Q9NUQ2 364 aa8.12□□□□□ -1.11
HTT-212ENST00000513639 RNF19AQ9NV58 838 aa8.12□□□□□ -1.11
HTT-212ENST00000513639 CLEC1BQ9P126 229 aa8.12□□□□□ -1.11
HTT-212ENST00000513639 WRAP73Q9P2S5 460 aaPredicted RBP8.12□□□□□ -1.11
HTT-212ENST00000513639 NOL7Q9UMY1 257 aaKnown RBP8.12□□□□□ -1.11
HTT-212ENST00000513639 PIEZO1Q92508 2521 aa8.12□□□□□ -1.11
HTT-212ENST00000513639 FAM205CA6NFA0 338 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 INO80B-WBP1J3KQ70 363 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 ZBTB39O15060 712 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 ST18O60284 1047 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 DTNBO60941 627 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 ZC3H11AO75152 810 aaKnown RBP eCLIP8.11□□□□□ -1.11
HTT-212ENST00000513639 GALTP07902 379 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 ITGA4P13612 1032 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 NCLP19338 710 aaKnown RBP8.11□□□□□ -1.11
HTT-212ENST00000513639 RPA1P27694 616 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 ARL2P36404 184 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 TECP42680 631 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 RARRES1P49788 294 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 ZNF174Q15697 407 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 TPRNQ4KMQ1 711 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 PLPP4Q5VZY2 271 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 CES5AQ6NT32 575 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 ADGRD2Q7Z7M1 963 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 PPFIBP1Q86W92 1011 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 CATSPER3Q86XQ3 398 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 NOSTRINQ8IVI9 506 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 CCDC83Q8IWF9 413 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 VPS52Q8N1B4 723 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 CASP10Q92851 521 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 IGSF21Q96ID5 467 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 PHF7Q9BWX1 381 aaPredicted RBP8.11□□□□□ -1.11
HTT-212ENST00000513639 RAB34Q9BZG1 259 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 TRIM6Q9C030 488 aaPredicted RBP8.11□□□□□ -1.11
HTT-212ENST00000513639 TBC1D13Q9NVG8 400 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 DPP7Q9UHL4 492 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 DBR1Q9UK59 544 aaKnown RBP8.11□□□□□ -1.11
HTT-212ENST00000513639 SSX2IPQ9Y2D8 614 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 FAN1Q9Y2M0 1017 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 HCN4Q9Y3Q4 1203 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 IRAK3Q9Y616 596 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 C5orf42Q9H799 3197 aa8.11□□□□□ -1.11
HTT-212ENST00000513639 C2orf71A6NGG8 1288 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 HIDE1A8MVS5 230 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 PRR33A8MZF0 331 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 LAD1O00515 517 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 TBX10O75333 385 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 SPATA31C1P0DKV0 1188 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 U2AF2P26368 475 aaKnown RBP eCLIP8.1□□□□□ -1.11
HTT-212ENST00000513639 GUCY1B3Q02153 619 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 ITIH3Q06033 890 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 KCNC3Q14003 757 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 RABEP1Q15276 862 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 LONRF3Q496Y0 759 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 HERC4Q5GLZ8 1057 aaPredicted RBP8.1□□□□□ -1.11
HTT-212ENST00000513639 ANKRD54Q6NXT1 300 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 RNF135Q8IUD6 432 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 PIGOQ8TEQ8 1089 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 LPPQ93052 612 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 PRIMPOLQ96LW4 560 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 MFSD14AQ96MC6 490 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 NECTIN4Q96NY8 510 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 TMEM175Q9BSA9 504 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 EMILIN2Q9BXX0 1053 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 CSRNP2Q9H175 543 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 C2orf40Q9H1Z8 148 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 NRDE2Q9H7Z3 1164 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 MINDY3Q9H8M7 445 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 RSAD1Q9HA92 442 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 LRWD1Q9UFC0 647 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 KCNG1Q9UIX4 513 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 BARX2Q9UMQ3 279 aaPredicted RBP8.1□□□□□ -1.11
HTT-212ENST00000513639 INPP5FQ9Y2H2 1132 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 GIT1Q9Y2X7 761 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 RALGAPA2Q2PPJ7 1873 aa8.1□□□□□ -1.11
HTT-212ENST00000513639 A0A1B0GUA9 196 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 ARHGEF35A5YM69 484 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 LOC730098B7Z3J9 87 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 NT5C1B-RDH14C9J2C7 533 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 GLP2RO95838 553 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 OR52Z1P0C646 297 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 CTSAP10619 480 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 CYP11B2P19099 503 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms