RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 C2orf40Q9H1Z8 148 aa19.62■□□□□ 0.73
DDR1-272ENST00000513243 THEGQ9P2T0 379 aa19.62■□□□□ 0.73
DDR1-272ENST00000513243 FBXO2Q9UK22 296 aaPredicted RBP19.62■□□□□ 0.73
DDR1-272ENST00000513243 A0A1B0GUA9 196 aa19.61■□□□□ 0.73
DDR1-272ENST00000513243 TTLL13PA6NNM8 815 aa19.61■□□□□ 0.73
DDR1-272ENST00000513243 HIP1RO75146 1068 aa19.61■□□□□ 0.73
DDR1-272ENST00000513243 SSBP05455 408 aaKnown RBP eCLIP19.61■□□□□ 0.73
DDR1-272ENST00000513243 PLA2G4BP0C869 781 aa19.61■□□□□ 0.73
DDR1-272ENST00000513243 NCLP19338 710 aaKnown RBP19.61■□□□□ 0.73
DDR1-272ENST00000513243 SLC12A3P55017 1021 aa19.61■□□□□ 0.73
DDR1-272ENST00000513243 MAPK7Q13164 816 aa19.61■□□□□ 0.73
DDR1-272ENST00000513243 FAM187BQ17R55 369 aa19.61■□□□□ 0.73
DDR1-272ENST00000513243 TIGD5Q53EQ6 642 aa19.61■□□□□ 0.73
DDR1-272ENST00000513243 CDR2LQ86X02 465 aaPredicted RBP19.61■□□□□ 0.73
DDR1-272ENST00000513243 LRRC15Q8TF66 581 aa19.61■□□□□ 0.73
DDR1-272ENST00000513243 MRPL9Q9BYD2 267 aaKnown RBP19.61■□□□□ 0.73
DDR1-272ENST00000513243 CCDC113Q9H0I3 377 aa19.61■□□□□ 0.73
DDR1-272ENST00000513243 PRMT7Q9NVM4 692 aaPredicted RBP19.61■□□□□ 0.73
DDR1-272ENST00000513243 IPPQ9Y573 584 aa19.61■□□□□ 0.73
DDR1-272ENST00000513243 FGF18O76093 207 aa19.6■□□□□ 0.73
DDR1-272ENST00000513243 CSPG5O95196 566 aa19.6■□□□□ 0.73
DDR1-272ENST00000513243 PBX3P40426 434 aa19.6■□□□□ 0.73
DDR1-272ENST00000513243 AFF1P51825 1210 aaKnown RBP19.6■□□□□ 0.73
DDR1-272ENST00000513243 KARSQ15046 597 aaKnown RBP19.6■□□□□ 0.73
DDR1-272ENST00000513243 CSPP1Q1MSJ5 1256 aa19.6■□□□□ 0.73
DDR1-272ENST00000513243 TCEAL5Q5H9L2 206 aa19.6■□□□□ 0.73
DDR1-272ENST00000513243 NOMO2Q5JPE7 1267 aa19.6■□□□□ 0.73
DDR1-272ENST00000513243 SPECC1Q5M775 1068 aa19.6■□□□□ 0.73
DDR1-272ENST00000513243 KCNT2Q6UVM3 1135 aa19.6■□□□□ 0.73
DDR1-272ENST00000513243 USP49Q70CQ1 688 aa19.6■□□□□ 0.73
DDR1-272ENST00000513243 THNSL1Q8IYQ7 743 aa19.6■□□□□ 0.73
DDR1-272ENST00000513243 CNNM3Q8NE01 707 aa19.6■□□□□ 0.73
DDR1-272ENST00000513243 POF1BQ8WVV4 589 aa19.6■□□□□ 0.73
DDR1-272ENST00000513243 ATXN2LQ8WWM7 1075 aaKnown RBP19.6■□□□□ 0.73
DDR1-272ENST00000513243 RSPH1Q8WYR4 309 aa19.6■□□□□ 0.73
DDR1-272ENST00000513243 CALML4Q96GE6 196 aa19.6■□□□□ 0.73
DDR1-272ENST00000513243 PRIMPOLQ96LW4 560 aa19.6■□□□□ 0.73
DDR1-272ENST00000513243 RNF39Q9H2S5 420 aa19.6■□□□□ 0.73
DDR1-272ENST00000513243 NSUN3Q9H649 340 aaKnown RBP19.6■□□□□ 0.73
DDR1-272ENST00000513243 INPP5FQ9Y2H2 1132 aa19.6■□□□□ 0.73
DDR1-272ENST00000513243 USP20Q9Y2K6 914 aa19.6■□□□□ 0.73
DDR1-272ENST00000513243 SRPRBQ9Y5M8 271 aaKnown RBP19.6■□□□□ 0.73
DDR1-272ENST00000513243 UNC80Q8N2C7 3258 aa19.6■□□□□ 0.73
DDR1-272ENST00000513243 CNTNAP2Q9UHC6 1331 aa19.59■□□□□ 0.73
DDR1-272ENST00000513243 EDN1P05305 212 aa19.59■□□□□ 0.73
DDR1-272ENST00000513243 PRKCBP05771 671 aa19.59■□□□□ 0.73
DDR1-272ENST00000513243 GUCY2CP25092 1073 aa19.59■□□□□ 0.73
DDR1-272ENST00000513243 NPTX2P47972 431 aa19.59■□□□□ 0.73
DDR1-272ENST00000513243 PEX3P56589 373 aa19.59■□□□□ 0.73
DDR1-272ENST00000513243 TFF2Q03403 129 aa19.59■□□□□ 0.73
DDR1-272ENST00000513243 RAD51AP2Q09MP3 1159 aa19.59■□□□□ 0.73
DDR1-272ENST00000513243 SLC39A14Q15043 492 aa19.59■□□□□ 0.73
DDR1-272ENST00000513243 MAPK6Q16659 721 aa19.59■□□□□ 0.73
DDR1-272ENST00000513243 FOXD4L5Q5VV16 416 aaPredicted RBP19.59■□□□□ 0.73
DDR1-272ENST00000513243 SLC27A1Q6PCB7 646 aa19.59■□□□□ 0.73
DDR1-272ENST00000513243 FOXD4L4Q8WXT5 416 aaPredicted RBP19.59■□□□□ 0.73
DDR1-272ENST00000513243 EPSTI1Q96J88 318 aa19.59■□□□□ 0.73
DDR1-272ENST00000513243 DRC1Q96MC2 740 aa19.59■□□□□ 0.73
DDR1-272ENST00000513243 ZNF558Q96NG5 402 aa19.59■□□□□ 0.73
DDR1-272ENST00000513243 CLIC6Q96NY7 704 aa19.59■□□□□ 0.73
DDR1-272ENST00000513243 TIPINQ9BVW5 301 aa19.59■□□□□ 0.73
DDR1-272ENST00000513243 CCSER1Q9C0I3 900 aa19.59■□□□□ 0.73
DDR1-272ENST00000513243 RSAD1Q9HA92 442 aa19.59■□□□□ 0.73
DDR1-272ENST00000513243 TBC1D13Q9NVG8 400 aa19.59■□□□□ 0.73
DDR1-272ENST00000513243 HES2Q9Y543 173 aa19.59■□□□□ 0.73
DDR1-272ENST00000513243 CCDC169A6NNP5 214 aa19.58■□□□□ 0.72
DDR1-272ENST00000513243 SFI1A8K8P3 1242 aa19.58■□□□□ 0.72
DDR1-272ENST00000513243 ACKR2O00590 384 aa19.58■□□□□ 0.72
DDR1-272ENST00000513243 ITGA4P13612 1032 aa19.58■□□□□ 0.72
DDR1-272ENST00000513243 PDIA4P13667 645 aaKnown RBP19.58■□□□□ 0.72
DDR1-272ENST00000513243 LIG1P18858 919 aa19.58■□□□□ 0.72
DDR1-272ENST00000513243 PLCG1P19174 1290 aa19.58■□□□□ 0.72
DDR1-272ENST00000513243 IRS1P35568 1242 aa19.58■□□□□ 0.72
DDR1-272ENST00000513243 NASPP49321 788 aaPredicted RBP19.58■□□□□ 0.72
DDR1-272ENST00000513243 EFNA5P52803 228 aa19.58■□□□□ 0.72
DDR1-272ENST00000513243 PRPF4BQ13523 1007 aaKnown RBP19.58■□□□□ 0.72
DDR1-272ENST00000513243 ARSHQ5FYA8 562 aa19.58■□□□□ 0.72
DDR1-272ENST00000513243 HLA-CQ95604 372 aa19.58■□□□□ 0.72
DDR1-272ENST00000513243 ASB2Q96Q27 587 aa19.58■□□□□ 0.72
DDR1-272ENST00000513243 NXF3Q9H4D5 531 aaKnown RBP19.58■□□□□ 0.72
DDR1-272ENST00000513243 BLOC1S4Q9NUP1 217 aa19.58■□□□□ 0.72
DDR1-272ENST00000513243 COG5Q9UP83 839 aa19.58■□□□□ 0.72
DDR1-272ENST00000513243 MORC2Q9Y6X9 1032 aaPredicted RBP19.58■□□□□ 0.72
DDR1-272ENST00000513243 MYO7AQ13402 2215 aa19.57■□□□□ 0.72
DDR1-272ENST00000513243 NPHP3-ACAD11A0A0J9YXS1 232 aa19.57■□□□□ 0.72
DDR1-272ENST00000513243 NPTXRO95502 500 aa19.57■□□□□ 0.72
DDR1-272ENST00000513243 ZSCAN22P10073 491 aaPredicted RBP19.57■□□□□ 0.72
DDR1-272ENST00000513243 BCAR1P56945 870 aa19.57■□□□□ 0.72
DDR1-272ENST00000513243 MRPS5P82675 430 aaKnown RBP19.57■□□□□ 0.72
DDR1-272ENST00000513243 PLCB3Q01970 1234 aa19.57■□□□□ 0.72
DDR1-272ENST00000513243 UBE3AQ05086 875 aa19.57■□□□□ 0.72
DDR1-272ENST00000513243 DMP1Q13316 513 aaPredicted RBP19.57■□□□□ 0.72
DDR1-272ENST00000513243 PKP1Q13835 747 aa19.57■□□□□ 0.72
DDR1-272ENST00000513243 RASSF8Q8NHQ8 419 aa19.57■□□□□ 0.72
DDR1-272ENST00000513243 TRIM6Q9C030 488 aaPredicted RBP19.57■□□□□ 0.72
DDR1-272ENST00000513243 PDZD7Q9H5P4 517 aa19.57■□□□□ 0.72
DDR1-272ENST00000513243 NRDE2Q9H7Z3 1164 aa19.57■□□□□ 0.72
DDR1-272ENST00000513243 C17orf75Q9HAS0 396 aa19.57■□□□□ 0.72
DDR1-272ENST00000513243 UBN1Q9NPG3 1134 aa19.57■□□□□ 0.72
DDR1-272ENST00000513243 SPG21Q9NZD8 308 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms