RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 PDE12Q6L8Q7 609 aaKnown RBP11.67□□□□□ -0.54
PDLIM5-217ENST00000512274 SASS6Q6UVJ0 657 aa11.67□□□□□ -0.54
PDLIM5-217ENST00000512274 CYFIP1Q7L576 1253 aa11.67□□□□□ -0.54
PDLIM5-217ENST00000512274 NIPA1Q7RTP0 329 aa11.67□□□□□ -0.54
PDLIM5-217ENST00000512274 RSPH3Q86UC2 560 aa11.67□□□□□ -0.54
PDLIM5-217ENST00000512274 IQUBQ8NA54 791 aa11.67□□□□□ -0.54
PDLIM5-217ENST00000512274 ZBTB10Q96DT7 871 aa11.67□□□□□ -0.54
PDLIM5-217ENST00000512274 FAM20AQ96MK3 541 aa11.67□□□□□ -0.54
PDLIM5-217ENST00000512274 NECTIN4Q96NY8 510 aa11.67□□□□□ -0.54
PDLIM5-217ENST00000512274 SDF4Q9BRK5 362 aa11.67□□□□□ -0.54
PDLIM5-217ENST00000512274 TMEM60Q9H2L4 133 aa11.67□□□□□ -0.54
PDLIM5-217ENST00000512274 TYW1Q9NV66 732 aaKnown RBP11.67□□□□□ -0.54
PDLIM5-217ENST00000512274 ANO10Q9NW15 660 aa11.67□□□□□ -0.54
PDLIM5-217ENST00000512274 PCDHB7Q9Y5E2 793 aa11.67□□□□□ -0.54
PDLIM5-217ENST00000512274 VWA3AA6NCI4 1184 aa11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 SP9P0CG40 484 aa11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 XRCC6P12956 609 aaKnown RBP eCLIP11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 HOXB3P14651 431 aaPredicted RBP11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 ATP2B1P20020 1258 aa11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 SARSP49591 514 aaKnown RBP11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 ITIH3Q06033 890 aa11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 TMEM62Q0P6H9 643 aa11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 STX1AQ16623 288 aa11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 UBE2SQ16763 222 aa11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 LONRF3Q496Y0 759 aa11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 HYIQ5T013 277 aa11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 FAM102BQ5T8I3 360 aa11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 XRRA1Q6P2D8 792 aa11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 ZC3H14Q6PJT7 736 aaKnown RBP11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 USP17L6PQ6QN14 398 aa11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 SLFN12Q8IYM2 578 aa11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 PLCD3Q8N3E9 789 aa11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 CNNM3Q8NE01 707 aa11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 FEZF2Q8TBJ5 459 aa11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 GPR20Q99678 358 aa11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 GTPBP4Q9BZE4 634 aaKnown RBP11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 RBSNQ9H1K0 784 aa11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 CYP26B1Q9NR63 512 aa11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 NCDNQ9UBB6 729 aa11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 ZNF215Q9UL58 517 aaPredicted RBP11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 PADI3Q9ULW8 664 aa11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 HCFC2Q9Y5Z7 792 aa11.66□□□□□ -0.54
PDLIM5-217ENST00000512274 NRCAMQ92823 1304 aa11.65□□□□□ -0.54
PDLIM5-217ENST00000512274 EP300Q09472 2414 aaPredicted RBP11.65□□□□□ -0.54
PDLIM5-217ENST00000512274 POLR2DO15514 142 aaKnown RBP11.65□□□□□ -0.54
PDLIM5-217ENST00000512274 NARSO43776 548 aaKnown RBP11.65□□□□□ -0.54
PDLIM5-217ENST00000512274 DCNP07585 359 aaKnown RBP11.65□□□□□ -0.54
PDLIM5-217ENST00000512274 CFHP08603 1231 aa11.65□□□□□ -0.54
PDLIM5-217ENST00000512274 TGFB3P10600 412 aa11.65□□□□□ -0.54
PDLIM5-217ENST00000512274 IGBP1P78318 339 aa11.65□□□□□ -0.54
PDLIM5-217ENST00000512274 MRPS6P82932 125 aaKnown RBP11.65□□□□□ -0.54
PDLIM5-217ENST00000512274 TDGQ13569 410 aa11.65□□□□□ -0.54
PDLIM5-217ENST00000512274 CAMK4Q16566 473 aa11.65□□□□□ -0.54
PDLIM5-217ENST00000512274 CALCRLQ16602 461 aa11.65□□□□□ -0.54
PDLIM5-217ENST00000512274 TMEM266Q2M3C6 531 aa11.65□□□□□ -0.54
PDLIM5-217ENST00000512274 TAF2Q6P1X5 1199 aa11.65□□□□□ -0.54
PDLIM5-217ENST00000512274 CNNM4Q6P4Q7 775 aa11.65□□□□□ -0.54
PDLIM5-217ENST00000512274 TMC7Q7Z402 723 aa11.65□□□□□ -0.54
PDLIM5-217ENST00000512274 VSIG10LQ86VR7 867 aa11.65□□□□□ -0.54
PDLIM5-217ENST00000512274 SUMF1Q8NBK3 374 aa11.65□□□□□ -0.54
PDLIM5-217ENST00000512274 ETNPPLQ8TBG4 499 aa11.65□□□□□ -0.54
PDLIM5-217ENST00000512274 LENG9Q96B70 501 aa11.65□□□□□ -0.54
PDLIM5-217ENST00000512274 FTHL17Q9BXU8 183 aa11.65□□□□□ -0.54
PDLIM5-217ENST00000512274 FAM49AQ9H0Q0 323 aaPredicted RBP11.65□□□□□ -0.54
PDLIM5-217ENST00000512274 DISC1Q9NRI5 854 aa11.65□□□□□ -0.54
PDLIM5-217ENST00000512274 DDX25Q9UHL0 483 aaKnown RBP11.65□□□□□ -0.54
PDLIM5-217ENST00000512274 PUF60Q9UHX1 559 aaKnown RBP11.65□□□□□ -0.54
PDLIM5-217ENST00000512274 CDV3Q9UKY7 258 aaKnown RBP11.65□□□□□ -0.54
PDLIM5-217ENST00000512274 DMDP11532 3685 aa11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 KRBA1A5PL33 1030 aa11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 SLC37A4O43826 429 aa11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 TDP2O95551 362 aa11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 EOMESO95936 686 aa11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 ADRB1P08588 477 aa11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 MUTP22033 750 aa11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 MARK3P27448 753 aa11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 CCND2P30279 289 aa11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 PBX3P40426 434 aa11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 SETQ01105 290 aaPredicted RBP11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 NFX1Q12986 1120 aaKnown RBP11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 PPFIA1Q13136 1202 aa11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 PAK2Q13177 524 aa11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 POSTNQ15063 836 aa11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 ATAT1Q5SQI0 421 aa11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 PDXDC2PQ6P474 469 aa11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 FCHSD1Q86WN1 690 aa11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 CKAP2LQ8IYA6 745 aa11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 HAS1Q92839 578 aa11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 EPSTI1Q96J88 318 aa11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 GSDMAQ96QA5 445 aa11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 NAT10Q9H0A0 1025 aaKnown RBP11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 CWH43Q9H720 699 aa11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 RNF216Q9NWF9 866 aaPredicted RBP11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 STK17AQ9UEE5 414 aa11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 CCDC39Q9UFE4 941 aa11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 CA14Q9ULX7 337 aa11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 DUSP12Q9UNI6 340 aa11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 NCOR2Q9Y618 2525 aa11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 DNAH14Q0VDD8 3507 aa11.64□□□□□ -0.55
PDLIM5-217ENST00000512274 DENND4AQ7Z401 1863 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms