RNA–Protein interactions for RNA: ENST00000511161.5

CCND3-214, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-214ENST00000511161 GLRA2P23416 452 aa20.25■□□□□ 0.83
CCND3-214ENST00000511161 RBM25P49756 843 aaKnown RBP20.25■□□□□ 0.83
CCND3-214ENST00000511161 RAB27AP51159 221 aa20.25■□□□□ 0.83
CCND3-214ENST00000511161 PTENP60484 403 aa20.25■□□□□ 0.83
CCND3-214ENST00000511161 NOSTRINQ8IVI9 506 aa20.25■□□□□ 0.83
CCND3-214ENST00000511161 PGBD4Q96DM1 585 aa20.25■□□□□ 0.83
CCND3-214ENST00000511161 TMEM169Q96HH4 297 aa20.25■□□□□ 0.83
CCND3-214ENST00000511161 TRAIPQ9BWF2 469 aa20.25■□□□□ 0.83
CCND3-214ENST00000511161 RNF39Q9H2S5 420 aa20.25■□□□□ 0.83
CCND3-214ENST00000511161 C11orf16Q9NQ32 467 aa20.25■□□□□ 0.83
CCND3-214ENST00000511161 LZTS1Q9Y250 596 aa20.25■□□□□ 0.83
CCND3-214ENST00000511161 HES2Q9Y543 173 aa20.25■□□□□ 0.83
CCND3-214ENST00000511161 B4GALT5O43286 388 aa20.24■□□□□ 0.83
CCND3-214ENST00000511161 ZNF623O75123 536 aa20.24■□□□□ 0.83
CCND3-214ENST00000511161 ARL2P36404 184 aa20.24■□□□□ 0.83
CCND3-214ENST00000511161 MBTD1Q05BQ5 628 aa20.24■□□□□ 0.83
CCND3-214ENST00000511161 TFDP1Q14186 410 aa20.24■□□□□ 0.83
CCND3-214ENST00000511161 MXD4Q14582 209 aaPredicted RBP20.24■□□□□ 0.83
CCND3-214ENST00000511161 TMEM31Q5JXX7 168 aa20.24■□□□□ 0.83
CCND3-214ENST00000511161 VPS52Q8N1B4 723 aa20.24■□□□□ 0.83
CCND3-214ENST00000511161 RSAD1Q9HA92 442 aa20.24■□□□□ 0.83
CCND3-214ENST00000511161 CDH22Q9UJ99 828 aa20.24■□□□□ 0.83
CCND3-214ENST00000511161 USP15Q9Y4E8 981 aaPredicted RBP20.24■□□□□ 0.83
CCND3-214ENST00000511161 LRRIQ4A6NIV6 560 aa20.23■□□□□ 0.83
CCND3-214ENST00000511161 DDHD2O94830 711 aa20.23■□□□□ 0.83
CCND3-214ENST00000511161 CD2BP2O95400 341 aaKnown RBP20.23■□□□□ 0.83
CCND3-214ENST00000511161 CXCL14O95715 111 aa20.23■□□□□ 0.83
CCND3-214ENST00000511161 SSBP05455 408 aaKnown RBP eCLIP20.23■□□□□ 0.83
CCND3-214ENST00000511161 GALTP07902 379 aa20.23■□□□□ 0.83
CCND3-214ENST00000511161 SP100P23497 879 aaPredicted RBP20.23■□□□□ 0.83
CCND3-214ENST00000511161 SLC11A1P49279 550 aa20.23■□□□□ 0.83
CCND3-214ENST00000511161 COASYQ13057 564 aa20.23■□□□□ 0.83
CCND3-214ENST00000511161 SMC1AQ14683 1233 aaKnown RBP20.23■□□□□ 0.83
CCND3-214ENST00000511161 PDE12Q6L8Q7 609 aaKnown RBP20.23■□□□□ 0.83
CCND3-214ENST00000511161 SMRP1Q8NCR6 262 aa20.23■□□□□ 0.83
CCND3-214ENST00000511161 SMG8Q8ND04 991 aaKnown RBP20.23■□□□□ 0.83
CCND3-214ENST00000511161 URGCPQ8TCY9 931 aa20.23■□□□□ 0.83
CCND3-214ENST00000511161 NGRNQ9NPE2 291 aaKnown RBP20.23■□□□□ 0.83
CCND3-214ENST00000511161 PRKAG3Q9UGI9 489 aa20.23■□□□□ 0.83
CCND3-214ENST00000511161 IPPQ9Y573 584 aa20.23■□□□□ 0.83
CCND3-214ENST00000511161 C2orf71A6NGG8 1288 aa20.22■□□□□ 0.83
CCND3-214ENST00000511161 C19orf67A6NJJ6 358 aa20.22■□□□□ 0.83
CCND3-214ENST00000511161 EYA4O95677 639 aa20.22■□□□□ 0.83
CCND3-214ENST00000511161 ITGA4P13612 1032 aa20.22■□□□□ 0.83
CCND3-214ENST00000511161 LIG1P18858 919 aa20.22■□□□□ 0.83
CCND3-214ENST00000511161 RABEP1Q15276 862 aa20.22■□□□□ 0.83
CCND3-214ENST00000511161 ECM1Q16610 540 aa20.22■□□□□ 0.83
CCND3-214ENST00000511161 MCTP1Q6DN14 999 aa20.22■□□□□ 0.83
CCND3-214ENST00000511161 MRPL10Q7Z7H8 261 aaKnown RBP20.22■□□□□ 0.83
CCND3-214ENST00000511161 IGSF21Q96ID5 467 aa20.22■□□□□ 0.83
CCND3-214ENST00000511161 FAM193BQ96PV7 902 aaPredicted RBP20.22■□□□□ 0.83
CCND3-214ENST00000511161 TUFT1Q9NNX1 390 aa20.22■□□□□ 0.83
CCND3-214ENST00000511161 MUTYHQ9UIF7 546 aa20.22■□□□□ 0.83
CCND3-214ENST00000511161 NOL7Q9UMY1 257 aaKnown RBP20.22■□□□□ 0.83
CCND3-214ENST00000511161 USP20Q9Y2K6 914 aa20.22■□□□□ 0.83
CCND3-214ENST00000511161 PCDHB6Q9Y5E3 794 aa20.22■□□□□ 0.83
CCND3-214ENST00000511161 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.21■□□□□ 0.83
CCND3-214ENST00000511161 ARF4P18085 180 aaPredicted RBP20.21■□□□□ 0.83
CCND3-214ENST00000511161 CCT6AP40227 531 aaKnown RBP20.21■□□□□ 0.83
CCND3-214ENST00000511161 MLH1P40692 756 aa20.21■□□□□ 0.83
CCND3-214ENST00000511161 TOB1P50616 345 aaPredicted RBP20.21■□□□□ 0.83
CCND3-214ENST00000511161 NOTUMQ6P988 496 aa20.21■□□□□ 0.83
CCND3-214ENST00000511161 C4orf32Q8N8J7 132 aa20.21■□□□□ 0.83
CCND3-214ENST00000511161 MRPL43Q8N983 215 aaKnown RBP20.21■□□□□ 0.83
CCND3-214ENST00000511161 ERMNQ8TAM6 284 aa20.21■□□□□ 0.83
CCND3-214ENST00000511161 RPGRIP1Q96KN7 1286 aa20.21■□□□□ 0.83
CCND3-214ENST00000511161 NACC1Q96RE7 527 aa20.21■□□□□ 0.83
CCND3-214ENST00000511161 GAD1Q99259 594 aa20.21■□□□□ 0.83
CCND3-214ENST00000511161 CDCA3Q99618 268 aaPredicted RBP20.21■□□□□ 0.83
CCND3-214ENST00000511161 POLR3CQ9BUI4 534 aaPredicted RBP20.21■□□□□ 0.83
CCND3-214ENST00000511161 VN1R3Q9BXE9 311 aa20.21■□□□□ 0.83
CCND3-214ENST00000511161 ST18O60284 1047 aa20.2■□□□□ 0.82
CCND3-214ENST00000511161 NPTXRO95502 500 aa20.2■□□□□ 0.82
CCND3-214ENST00000511161 NCLP19338 710 aaKnown RBP20.2■□□□□ 0.82
CCND3-214ENST00000511161 AKAP5P24588 427 aa20.2■□□□□ 0.82
CCND3-214ENST00000511161 NCBP1Q09161 790 aaKnown RBP20.2■□□□□ 0.82
CCND3-214ENST00000511161 AMHR2Q16671 573 aa20.2■□□□□ 0.82
CCND3-214ENST00000511161 ANKRD54Q6NXT1 300 aa20.2■□□□□ 0.82
CCND3-214ENST00000511161 KANK3Q6NY19 840 aa20.2■□□□□ 0.82
CCND3-214ENST00000511161 PADI6Q6TGC4 694 aa20.2■□□□□ 0.82
CCND3-214ENST00000511161 TMEM87AQ8NBN3 555 aa20.2■□□□□ 0.82
CCND3-214ENST00000511161 ZFP42Q96MM3 310 aa20.2■□□□□ 0.82
CCND3-214ENST00000511161 TRIM6Q9C030 488 aaPredicted RBP20.2■□□□□ 0.82
CCND3-214ENST00000511161 CSRNP2Q9H175 543 aa20.2■□□□□ 0.82
CCND3-214ENST00000511161 NXF3Q9H4D5 531 aaKnown RBP20.2■□□□□ 0.82
CCND3-214ENST00000511161 MIOSQ9NXC5 875 aa20.2■□□□□ 0.82
CCND3-214ENST00000511161 KLK14Q9P0G3 267 aa20.2■□□□□ 0.82
CCND3-214ENST00000511161 PRG3Q9Y2Y8 225 aaPredicted RBP20.2■□□□□ 0.82
CCND3-214ENST00000511161 TDRD15B5MCY1 1934 aaKnown RBP20.19■□□□□ 0.82
CCND3-214ENST00000511161 ARHGEF35A5YM69 484 aa20.19■□□□□ 0.82
CCND3-214ENST00000511161 TTLL13PA6NNM8 815 aa20.19■□□□□ 0.82
CCND3-214ENST00000511161 PP2D1A8MPX8 630 aa20.19■□□□□ 0.82
CCND3-214ENST00000511161 DCXO43602 365 aa20.19■□□□□ 0.82
CCND3-214ENST00000511161 CLASP2O75122 1294 aaKnown RBP20.19■□□□□ 0.82
CCND3-214ENST00000511161 WEE2P0C1S8 567 aa20.19■□□□□ 0.82
CCND3-214ENST00000511161 XRCC6P12956 609 aaKnown RBP eCLIP20.19■□□□□ 0.82
CCND3-214ENST00000511161 RPA1P27694 616 aa20.19■□□□□ 0.82
CCND3-214ENST00000511161 PTGDRQ13258 359 aa20.19■□□□□ 0.82
CCND3-214ENST00000511161 KCNC3Q14003 757 aa20.19■□□□□ 0.82
CCND3-214ENST00000511161 SYCE2Q6PIF2 218 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms